Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm43360-201ENSMUST00000197656 2887 ntBASIC5.93□□□□□ -1.46
Lima1Q9ERG0 Gm36099-201ENSMUST00000221946 1798 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Lima1Q9ERG0 Gm38137-201ENSMUST00000193735 1401 ntBASIC5.93□□□□□ -1.46
Lima1Q9ERG0 Gm17275-201ENSMUST00000181811 2550 ntTSL 5 BASIC5.93□□□□□ -1.46
Lima1Q9ERG0 Son-205ENSMUST00000122302 2449 ntTSL 5 BASIC5.93□□□□□ -1.46
Lima1Q9ERG0 Gp6-202ENSMUST00000206928 5900 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Lima1Q9ERG0 Gm14173-201ENSMUST00000117690 278 ntBASIC5.93□□□□□ -1.46
Lima1Q9ERG0 4930503H13Rik-201ENSMUST00000118320 725 ntBASIC5.93□□□□□ -1.46
Lima1Q9ERG0 Gm12442-201ENSMUST00000118372 338 ntBASIC5.93□□□□□ -1.46
Lima1Q9ERG0 Gm11184-201ENSMUST00000126437 268 ntTSL 3 BASIC5.93□□□□□ -1.46
Lima1Q9ERG0 Gm15551-201ENSMUST00000132762 535 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Lima1Q9ERG0 Rpl35a-ps5-201ENSMUST00000137013 333 ntBASIC5.93□□□□□ -1.46
Lima1Q9ERG0 AI646519-201ENSMUST00000140987 351 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Lima1Q9ERG0 4930448H16Rik-201ENSMUST00000159838 580 ntTSL 5 BASIC5.93□□□□□ -1.46
Lima1Q9ERG0 Mir5107-201ENSMUST00000175586 88 ntBASIC5.93□□□□□ -1.46
Lima1Q9ERG0 Gm20643-201ENSMUST00000177284 322 ntTSL 3 BASIC5.93□□□□□ -1.46
Lima1Q9ERG0 Gm26715-201ENSMUST00000181676 1095 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Lima1Q9ERG0 Gm28358-201ENSMUST00000187860 636 ntTSL 5 BASIC5.93□□□□□ -1.46
Lima1Q9ERG0 Gm29489-201ENSMUST00000188934 324 ntBASIC5.93□□□□□ -1.46
Lima1Q9ERG0 Gm8869-201ENSMUST00000195222 947 ntBASIC5.93□□□□□ -1.46
Lima1Q9ERG0 Gm42865-201ENSMUST00000197981 613 ntTSL 3 BASIC5.93□□□□□ -1.46
Lima1Q9ERG0 Gm42461-201ENSMUST00000198627 1150 ntBASIC5.93□□□□□ -1.46
Lima1Q9ERG0 Gm44075-201ENSMUST00000204208 216 ntBASIC5.93□□□□□ -1.46
Lima1Q9ERG0 Rfpl4-203ENSMUST00000208468 1238 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
Lima1Q9ERG0 Gm45431-201ENSMUST00000210143 588 ntTSL 5 BASIC5.93□□□□□ -1.46
Lima1Q9ERG0 AC159297.1-201ENSMUST00000218689 290 ntBASIC5.93□□□□□ -1.46
Lima1Q9ERG0 AC124601.1-201ENSMUST00000220531 135 ntBASIC5.93□□□□□ -1.46
Lima1Q9ERG0 CT010431.1-201ENSMUST00000221249 1080 ntBASIC5.93□□□□□ -1.46
Lima1Q9ERG0 AC159622.2-201ENSMUST00000221592 983 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Lima1Q9ERG0 AC105407.1-201ENSMUST00000225684 614 ntBASIC5.93□□□□□ -1.46
Lima1Q9ERG0 Olfr1404-201ENSMUST00000056592 1034 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Lima1Q9ERG0 Vmn1r4-201ENSMUST00000096612 1034 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Lima1Q9ERG0 Fat1-205ENSMUST00000191428 14814 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Lima1Q9ERG0 Gm43025-201ENSMUST00000201764 1886 ntBASIC5.93□□□□□ -1.46
Lima1Q9ERG0 Gm43682-201ENSMUST00000202150 2090 ntBASIC5.93□□□□□ -1.46
Lima1Q9ERG0 Phospho2-206ENSMUST00000180290 3267 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Lima1Q9ERG0 Gm6125-201ENSMUST00000217983 3472 ntBASIC5.93□□□□□ -1.46
Lima1Q9ERG0 Olfr1392-206ENSMUST00000215861 3670 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Lima1Q9ERG0 Sgip1-202ENSMUST00000072481 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Lima1Q9ERG0 Cd200r3-206ENSMUST00000114622 1339 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Lima1Q9ERG0 Gm44886-201ENSMUST00000209009 1304 ntTSL 5 BASIC5.93□□□□□ -1.46
Lima1Q9ERG0 Vmn1r89-207ENSMUST00000227390 1348 ntAPPRIS ALT2 BASIC5.93□□□□□ -1.46
Lima1Q9ERG0 Gm37127-201ENSMUST00000192924 3036 ntBASIC5.93□□□□□ -1.46
Lima1Q9ERG0 Smc2-202ENSMUST00000117280 5328 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Lima1Q9ERG0 Xpo1-203ENSMUST00000102870 3471 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Lima1Q9ERG0 Lair1-202ENSMUST00000086400 3461 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
Lima1Q9ERG0 Olfr736-204ENSMUST00000215227 2485 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Lima1Q9ERG0 Olfr55-203ENSMUST00000214891 4428 ntTSL 5 BASIC5.92□□□□□ -1.46
Lima1Q9ERG0 Gm9968-201ENSMUST00000147504 2990 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Lima1Q9ERG0 Gm13101-201ENSMUST00000105763 1678 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Lima1Q9ERG0 Vmn2r120-201ENSMUST00000165781 2571 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Lima1Q9ERG0 Arhgap12-202ENSMUST00000077128 4431 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Lima1Q9ERG0 Gm3510-201ENSMUST00000180447 1455 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Lima1Q9ERG0 Gm15457-201ENSMUST00000129513 3990 ntTSL 2 BASIC5.92□□□□□ -1.46
Lima1Q9ERG0 Ighv1-16-201ENSMUST00000103501 294 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Lima1Q9ERG0 Ighv1-24-201ENSMUST00000103509 294 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Lima1Q9ERG0 Atp6ap1l-201ENSMUST00000109541 1186 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Lima1Q9ERG0 Defb45-201ENSMUST00000109834 385 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Lima1Q9ERG0 Klra3-202ENSMUST00000111998 1238 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Lima1Q9ERG0 Gm14510-201ENSMUST00000116165 1092 ntBASIC5.92□□□□□ -1.46
Lima1Q9ERG0 Skint1-201ENSMUST00000117379 875 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Lima1Q9ERG0 Gm6654-201ENSMUST00000118950 348 ntBASIC5.92□□□□□ -1.46
Lima1Q9ERG0 Gm7058-201ENSMUST00000119209 902 ntBASIC5.92□□□□□ -1.46
Lima1Q9ERG0 Gm15181-201ENSMUST00000120142 177 ntBASIC5.92□□□□□ -1.46
Lima1Q9ERG0 Vmn1r-ps111-201ENSMUST00000121014 997 ntBASIC5.92□□□□□ -1.46
Lima1Q9ERG0 Gm12399-201ENSMUST00000121475 446 ntBASIC5.92□□□□□ -1.46
Lima1Q9ERG0 Gm2986-201ENSMUST00000121603 382 ntBASIC5.92□□□□□ -1.46
Lima1Q9ERG0 Gm12929-201ENSMUST00000122406 370 ntBASIC5.92□□□□□ -1.46
Lima1Q9ERG0 Gm12066-201ENSMUST00000123592 443 ntTSL 3 BASIC5.92□□□□□ -1.46
Lima1Q9ERG0 Vmn1r208-201ENSMUST00000124841 927 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Lima1Q9ERG0 Gm15859-201ENSMUST00000132069 710 ntTSL 5 BASIC5.92□□□□□ -1.46
Lima1Q9ERG0 Gm23894-201ENSMUST00000158107 313 ntBASIC5.92□□□□□ -1.46
Lima1Q9ERG0 Skint1-203ENSMUST00000161389 960 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Lima1Q9ERG0 Obox1-202ENSMUST00000172463 783 ntAPPRIS P1 TSL 3 BASIC5.92□□□□□ -1.46
Lima1Q9ERG0 Gm22642-201ENSMUST00000175352 252 ntBASIC5.92□□□□□ -1.46
Lima1Q9ERG0 Gm20637-201ENSMUST00000175715 462 ntBASIC5.92□□□□□ -1.46
Lima1Q9ERG0 Ly6c2-203ENSMUST00000188214 638 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Lima1Q9ERG0 Gm29592-201ENSMUST00000189434 370 ntBASIC5.92□□□□□ -1.46
Lima1Q9ERG0 Gm37220-201ENSMUST00000195179 415 ntTSL 5 BASIC5.92□□□□□ -1.46
Lima1Q9ERG0 Ltf-209ENSMUST00000198884 616 ntTSL 5 BASIC5.92□□□□□ -1.46
Lima1Q9ERG0 Gm42640-201ENSMUST00000199792 1195 ntBASIC5.92□□□□□ -1.46
Lima1Q9ERG0 2210412B16Rik-201ENSMUST00000201281 498 ntBASIC5.92□□□□□ -1.46
Lima1Q9ERG0 4930480K02Rik-201ENSMUST00000203679 1054 ntBASIC5.92□□□□□ -1.46
Lima1Q9ERG0 Gm17834-201ENSMUST00000204322 891 ntBASIC5.92□□□□□ -1.46
Lima1Q9ERG0 Gm19653-201ENSMUST00000204326 1039 ntBASIC5.92□□□□□ -1.46
Lima1Q9ERG0 Gm18805-201ENSMUST00000206872 655 ntBASIC5.92□□□□□ -1.46
Lima1Q9ERG0 Gm44787-202ENSMUST00000208339 1069 ntTSL 5 BASIC5.92□□□□□ -1.46
Lima1Q9ERG0 AC166352.1-201ENSMUST00000215483 1105 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Lima1Q9ERG0 Olfr1440-201ENSMUST00000054567 948 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Lima1Q9ERG0 n-R5s65-201ENSMUST00000082614 117 ntBASIC5.92□□□□□ -1.46
Lima1Q9ERG0 Olfr1079-201ENSMUST00000099882 948 ntAPPRIS P2 BASIC5.92□□□□□ -1.46
Lima1Q9ERG0 Omd-202ENSMUST00000221170 2249 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Lima1Q9ERG0 Spata6-203ENSMUST00000084354 2239 ntTSL 5 BASIC5.92□□□□□ -1.46
Lima1Q9ERG0 Gm19272-201ENSMUST00000184133 1753 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Lima1Q9ERG0 Zfp994-201ENSMUST00000179996 4880 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Lima1Q9ERG0 Gm4927-201ENSMUST00000219548 1318 ntBASIC5.92□□□□□ -1.46
Lima1Q9ERG0 Gm37880-201ENSMUST00000192216 3257 ntBASIC5.92□□□□□ -1.46
Lima1Q9ERG0 Kmt2d-201ENSMUST00000023741 19823 ntAPPRIS P2 TSL 5 BASIC5.92□□□□□ -1.46
Lima1Q9ERG0 A330008L17Rik-202ENSMUST00000153366 2614 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Lima1Q9ERG0 Gm38277-201ENSMUST00000195172 1367 ntBASIC5.92□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms