Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm3424-201ENSMUST00000164585 1758 ntAPPRIS P5 TSL 5 BASIC5.75□□□□□ -1.49
Cdc40Q9DC48 Gm3182-201ENSMUST00000167902 1753 ntAPPRIS P5 TSL 5 BASIC5.75□□□□□ -1.49
Cdc40Q9DC48 Gm8246-202ENSMUST00000180788 1753 ntAPPRIS P5 TSL 5 BASIC5.75□□□□□ -1.49
Cdc40Q9DC48 Vmn1r203-202ENSMUST00000227520 8227 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Cdc40Q9DC48 Gm37628-201ENSMUST00000194644 5440 ntBASIC5.75□□□□□ -1.49
Cdc40Q9DC48 Gm38105-201ENSMUST00000192112 2621 ntBASIC5.75□□□□□ -1.49
Cdc40Q9DC48 Gm42894-201ENSMUST00000200788 3390 ntBASIC5.75□□□□□ -1.49
Cdc40Q9DC48 Gm37677-201ENSMUST00000194520 7634 ntBASIC5.75□□□□□ -1.49
Cdc40Q9DC48 Dock2-203ENSMUST00000101365 3785 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Cdc40Q9DC48 Ahnak-202ENSMUST00000092956 18099 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
Cdc40Q9DC48 9930038B18Rik-201ENSMUST00000151816 3966 ntTSL 5 BASIC5.74□□□□□ -1.49
Cdc40Q9DC48 Dnajc13-203ENSMUST00000186788 6747 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Cdc40Q9DC48 Dmxl1-201ENSMUST00000041772 12247 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
Cdc40Q9DC48 Pramel4-203ENSMUST00000094520 2297 ntAPPRIS P2 TSL 2 BASIC5.74□□□□□ -1.49
Cdc40Q9DC48 Gria4-204ENSMUST00000212533 5207 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Cdc40Q9DC48 Asb15-202ENSMUST00000117688 4371 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Cdc40Q9DC48 Zfp825-203ENSMUST00000221173 1549 ntAPPRIS ALT2 TSL 3 BASIC5.74□□□□□ -1.49
Cdc40Q9DC48 Vmn2r61-201ENSMUST00000166131 2598 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Cdc40Q9DC48 Tmprss11f-201ENSMUST00000116553 3605 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Cdc40Q9DC48 Abca4-207ENSMUST00000141135 3606 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Cdc40Q9DC48 Hmgn5-201ENSMUST00000033597 1934 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Cdc40Q9DC48 AC155298.1-201ENSMUST00000225350 3250 ntBASIC5.74□□□□□ -1.49
Cdc40Q9DC48 Rpgrip1l-201ENSMUST00000047783 7009 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Cdc40Q9DC48 Lmbrd2-201ENSMUST00000090380 3210 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Cdc40Q9DC48 Ap5m1-208ENSMUST00000228238 3514 ntBASIC5.74□□□□□ -1.49
Cdc40Q9DC48 Olfr50-201ENSMUST00000112950 1157 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Cdc40Q9DC48 Gm20815-201ENSMUST00000115496 1224 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Cdc40Q9DC48 Gm22952-201ENSMUST00000116720 120 ntBASIC5.74□□□□□ -1.49
Cdc40Q9DC48 4930503H13Rik-201ENSMUST00000118320 725 ntBASIC5.74□□□□□ -1.49
Cdc40Q9DC48 Gm8855-201ENSMUST00000118888 878 ntBASIC5.74□□□□□ -1.49
Cdc40Q9DC48 Hspe1-ps4-201ENSMUST00000119538 286 ntBASIC5.74□□□□□ -1.49
Cdc40Q9DC48 Gm15967-201ENSMUST00000120027 1116 ntBASIC5.74□□□□□ -1.49
Cdc40Q9DC48 Gm12654-201ENSMUST00000120387 587 ntBASIC5.74□□□□□ -1.49
Cdc40Q9DC48 Gm12094-201ENSMUST00000121781 472 ntBASIC5.74□□□□□ -1.49
Cdc40Q9DC48 4933406K04Rik-202ENSMUST00000124363 1064 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Cdc40Q9DC48 Gm16726-201ENSMUST00000130184 892 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Cdc40Q9DC48 Gm24733-201ENSMUST00000158863 253 ntBASIC5.74□□□□□ -1.49
Cdc40Q9DC48 1810053B23Rik-201ENSMUST00000185242 634 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Cdc40Q9DC48 Gm3970-201ENSMUST00000198001 334 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Cdc40Q9DC48 BC049739-201ENSMUST00000202626 660 ntBASIC5.74□□□□□ -1.49
Cdc40Q9DC48 Gm44225-201ENSMUST00000203582 186 ntBASIC5.74□□□□□ -1.49
Cdc40Q9DC48 Gm44020-201ENSMUST00000204618 664 ntTSL 3 BASIC5.74□□□□□ -1.49
Cdc40Q9DC48 Gm18467-201ENSMUST00000208805 434 ntBASIC5.74□□□□□ -1.49
Cdc40Q9DC48 Gm45734-201ENSMUST00000211916 411 ntBASIC5.74□□□□□ -1.49
Cdc40Q9DC48 4930529N20Rik-201ENSMUST00000220538 639 ntTSL 3 BASIC5.74□□□□□ -1.49
Cdc40Q9DC48 AC161252.1-201ENSMUST00000225536 467 ntBASIC5.74□□□□□ -1.49
Cdc40Q9DC48 Lcn12-201ENSMUST00000028312 716 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Cdc40Q9DC48 Tas2r143-201ENSMUST00000057398 882 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Cdc40Q9DC48 Olfr771-201ENSMUST00000078914 954 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Cdc40Q9DC48 Gm8526-201ENSMUST00000079153 475 ntBASIC5.74□□□□□ -1.49
Cdc40Q9DC48 Olfr201-201ENSMUST00000099656 927 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Cdc40Q9DC48 BC080695-202ENSMUST00000105774 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Cdc40Q9DC48 Gm15448-202ENSMUST00000108619 2097 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
Cdc40Q9DC48 AC125328.1-201ENSMUST00000226812 2265 ntBASIC5.74□□□□□ -1.49
Cdc40Q9DC48 Pkn2-206ENSMUST00000173830 2808 ntTSL 5 BASIC5.74□□□□□ -1.49
Cdc40Q9DC48 Gm44215-201ENSMUST00000204910 2711 ntBASIC5.74□□□□□ -1.49
Cdc40Q9DC48 Olfr491-203ENSMUST00000214605 2136 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
Cdc40Q9DC48 Olfr1504-202ENSMUST00000209192 1514 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
Cdc40Q9DC48 AC107232.1-201ENSMUST00000227785 1503 ntBASIC5.74□□□□□ -1.49
Cdc40Q9DC48 Gm7980-201ENSMUST00000168107 1403 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Cdc40Q9DC48 Dclre1a-204ENSMUST00000182276 4066 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Cdc40Q9DC48 S100pbp-202ENSMUST00000072431 4059 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Cdc40Q9DC48 Lrrc49-201ENSMUST00000053171 3086 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Cdc40Q9DC48 Olfr10-202ENSMUST00000217290 2776 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Cdc40Q9DC48 Vmn2r-ps54-205ENSMUST00000182110 2587 ntBASIC5.73□□□□□ -1.49
Cdc40Q9DC48 Zranb3-201ENSMUST00000086614 4210 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Cdc40Q9DC48 Gm43719-201ENSMUST00000200088 2199 ntBASIC5.73□□□□□ -1.49
Cdc40Q9DC48 Olfr947-ps1-203ENSMUST00000215471 2177 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Cdc40Q9DC48 Gm20300-201ENSMUST00000214634 3440 ntBASIC5.73□□□□□ -1.49
Cdc40Q9DC48 Ranbp17-201ENSMUST00000037522 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Cdc40Q9DC48 Otc-201ENSMUST00000049910 2319 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Cdc40Q9DC48 Il1b-201ENSMUST00000028881 1356 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Cdc40Q9DC48 Gm25795-201ENSMUST00000104421 132 ntBASIC5.73□□□□□ -1.49
Cdc40Q9DC48 Lrrc51-205ENSMUST00000106965 743 ntTSL 3 BASIC5.73□□□□□ -1.49
Cdc40Q9DC48 Zfp971-201ENSMUST00000108925 923 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Cdc40Q9DC48 Gm12400-201ENSMUST00000120915 1003 ntBASIC5.73□□□□□ -1.49
Cdc40Q9DC48 Calr-ps-201ENSMUST00000121776 485 ntBASIC5.73□□□□□ -1.49
Cdc40Q9DC48 Gm14640-201ENSMUST00000145800 437 ntTSL 5 BASIC5.73□□□□□ -1.49
Cdc40Q9DC48 Gm20506-201ENSMUST00000172952 589 ntTSL 3 BASIC5.73□□□□□ -1.49
Cdc40Q9DC48 D630011A20Rik-201ENSMUST00000180858 500 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Cdc40Q9DC48 Sbp-203ENSMUST00000182519 368 ntTSL 2 BASIC5.73□□□□□ -1.49
Cdc40Q9DC48 Gm29519-201ENSMUST00000186994 398 ntBASIC5.73□□□□□ -1.49
Cdc40Q9DC48 Gm44571-201ENSMUST00000208092 533 ntBASIC5.73□□□□□ -1.49
Cdc40Q9DC48 Gm34574-201ENSMUST00000217795 1240 ntTSL 5 BASIC5.73□□□□□ -1.49
Cdc40Q9DC48 Gm18618-201ENSMUST00000222211 473 ntBASIC5.73□□□□□ -1.49
Cdc40Q9DC48 AC154808.1-201ENSMUST00000223156 730 ntTSL 5 BASIC5.73□□□□□ -1.49
Cdc40Q9DC48 CT009515.3-201ENSMUST00000226509 671 ntBASIC5.73□□□□□ -1.49
Cdc40Q9DC48 AC154718.1-201ENSMUST00000226676 250 ntBASIC5.73□□□□□ -1.49
Cdc40Q9DC48 AC136376.1-201ENSMUST00000228496 950 ntBASIC5.73□□□□□ -1.49
Cdc40Q9DC48 Tsga13-201ENSMUST00000048580 1141 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Cdc40Q9DC48 Olfr726-201ENSMUST00000072370 966 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Cdc40Q9DC48 Olfr365-201ENSMUST00000074168 939 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Cdc40Q9DC48 Fpr-rs4-201ENSMUST00000095651 972 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Cdc40Q9DC48 Zfp970-201ENSMUST00000099002 794 ntTSL 2 BASIC5.73□□□□□ -1.49
Cdc40Q9DC48 Gm14391-201ENSMUST00000099028 473 ntTSL 5 BASIC5.73□□□□□ -1.49
Cdc40Q9DC48 Mndal-201ENSMUST00000111210 1907 ntAPPRIS P2 TSL 5 BASIC5.73□□□□□ -1.49
Cdc40Q9DC48 4932435O22Rik-202ENSMUST00000148405 3406 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Cdc40Q9DC48 Crnn-201ENSMUST00000107300 1628 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
Cdc40Q9DC48 Olfr508-201ENSMUST00000072914 1635 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Cdc40Q9DC48 Mettl4-201ENSMUST00000171284 2150 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 92.1 ms