Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Gm43842-201ENSMUST00000202890 2982 ntBASIC7.24□□□□□ -1.25
Trim42Q9D2H5 Fgf1-201ENSMUST00000040647 3981 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Trim42Q9D2H5 Robo2-202ENSMUST00000117200 5988 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Trim42Q9D2H5 Pcdh15-205ENSMUST00000105429 6719 ntTSL 5 BASIC7.24□□□□□ -1.25
Trim42Q9D2H5 C87977-204ENSMUST00000105757 1885 ntAPPRIS P2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Trim42Q9D2H5 CT010470.1-201ENSMUST00000225364 1876 ntBASIC7.24□□□□□ -1.25
Trim42Q9D2H5 Adar-201ENSMUST00000029563 3753 ntAPPRIS P4 TSL 1 (best) BASIC7.24□□□□□ -1.25
Trim42Q9D2H5 F830016B08Rik-201ENSMUST00000171297 3297 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Trim42Q9D2H5 Cnpy1-205ENSMUST00000141601 3018 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Trim42Q9D2H5 Olfr99-202ENSMUST00000216328 1778 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Trim42Q9D2H5 Ica1l-206ENSMUST00000191251 3415 ntAPPRIS P2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Trim42Q9D2H5 Gm11934-201ENSMUST00000132553 1536 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Trim42Q9D2H5 Lrcol1-201ENSMUST00000100924 692 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Trim42Q9D2H5 Igkv4-51-201ENSMUST00000103345 394 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Trim42Q9D2H5 Gm12643-201ENSMUST00000116078 374 ntBASIC7.24□□□□□ -1.25
Trim42Q9D2H5 Gm24195-201ENSMUST00000116804 137 ntBASIC7.24□□□□□ -1.25
Trim42Q9D2H5 Gm11859-201ENSMUST00000118099 455 ntBASIC7.24□□□□□ -1.25
Trim42Q9D2H5 Gm11997-201ENSMUST00000118697 313 ntBASIC7.24□□□□□ -1.25
Trim42Q9D2H5 Gm12710-201ENSMUST00000119011 216 ntBASIC7.24□□□□□ -1.25
Trim42Q9D2H5 Gm16056-201ENSMUST00000119293 135 ntBASIC7.24□□□□□ -1.25
Trim42Q9D2H5 Gm15842-201ENSMUST00000120513 618 ntBASIC7.24□□□□□ -1.25
Trim42Q9D2H5 Olfr1017-ps1-201ENSMUST00000121263 664 ntBASIC7.24□□□□□ -1.25
Trim42Q9D2H5 Gm13602-201ENSMUST00000122405 493 ntBASIC7.24□□□□□ -1.25
Trim42Q9D2H5 Trav8-2-201ENSMUST00000130122 337 ntBASIC7.24□□□□□ -1.25
Trim42Q9D2H5 1700011I03Rik-204ENSMUST00000135806 831 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Trim42Q9D2H5 Gm15787-206ENSMUST00000141008 585 ntTSL 2 BASIC7.24□□□□□ -1.25
Trim42Q9D2H5 Gm26048-201ENSMUST00000157305 142 ntBASIC7.24□□□□□ -1.25
Trim42Q9D2H5 Gm4340-201ENSMUST00000163113 807 ntAPPRIS ALT2 BASIC7.24□□□□□ -1.25
Trim42Q9D2H5 Olfr723-201ENSMUST00000164157 1006 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Trim42Q9D2H5 Gm3182-202ENSMUST00000169364 997 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
Trim42Q9D2H5 Gm17333-201ENSMUST00000169531 378 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Trim42Q9D2H5 Vmn2r-ps37-201ENSMUST00000174682 1044 ntBASIC7.24□□□□□ -1.25
Trim42Q9D2H5 n-R5s115-201ENSMUST00000179019 119 ntBASIC7.24□□□□□ -1.25
Trim42Q9D2H5 Gm8167-201ENSMUST00000183320 958 ntBASIC7.24□□□□□ -1.25
Trim42Q9D2H5 Cd68-201ENSMUST00000018918 1230 ntAPPRIS P2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Trim42Q9D2H5 Gm28190-201ENSMUST00000189766 722 ntBASIC7.24□□□□□ -1.25
Trim42Q9D2H5 Gm29214-201ENSMUST00000190216 570 ntBASIC7.24□□□□□ -1.25
Trim42Q9D2H5 Gm29462-201ENSMUST00000191458 288 ntBASIC7.24□□□□□ -1.25
Trim42Q9D2H5 Gm29739-201ENSMUST00000191760 529 ntBASIC7.24□□□□□ -1.25
Trim42Q9D2H5 Gm37349-201ENSMUST00000194205 624 ntBASIC7.24□□□□□ -1.25
Trim42Q9D2H5 Gm37871-201ENSMUST00000194973 688 ntBASIC7.24□□□□□ -1.25
Trim42Q9D2H5 Gm33370-201ENSMUST00000195935 489 ntTSL 2 BASIC7.24□□□□□ -1.25
Trim42Q9D2H5 Gm44770-201ENSMUST00000205395 1264 ntBASIC7.24□□□□□ -1.25
Trim42Q9D2H5 Olfr723-202ENSMUST00000206058 1078 ntAPPRIS P1 TSL 3 BASIC7.24□□□□□ -1.25
Trim42Q9D2H5 Gm45155-201ENSMUST00000207365 596 ntTSL 2 BASIC7.24□□□□□ -1.25
Trim42Q9D2H5 Gm7495-201ENSMUST00000215099 426 ntBASIC7.24□□□□□ -1.25
Trim42Q9D2H5 CT485606.3-201ENSMUST00000215810 624 ntTSL 3 BASIC7.24□□□□□ -1.25
Trim42Q9D2H5 AC151971.2-201ENSMUST00000217540 909 ntBASIC7.24□□□□□ -1.25
Trim42Q9D2H5 Pln-204ENSMUST00000219491 771 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
Trim42Q9D2H5 Gm9231-201ENSMUST00000220817 1009 ntBASIC7.24□□□□□ -1.25
Trim42Q9D2H5 CT033781.3-201ENSMUST00000221886 504 ntTSL 2 BASIC7.24□□□□□ -1.25
Trim42Q9D2H5 AC159619.2-201ENSMUST00000222924 401 ntBASIC7.24□□□□□ -1.25
Trim42Q9D2H5 AC154426.1-201ENSMUST00000225614 1132 ntBASIC7.24□□□□□ -1.25
Trim42Q9D2H5 CT009550.3-201ENSMUST00000228542 455 ntBASIC7.24□□□□□ -1.25
Trim42Q9D2H5 Fgf21-201ENSMUST00000033099 951 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Trim42Q9D2H5 Olfr741-201ENSMUST00000071932 936 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Trim42Q9D2H5 Olfr850-201ENSMUST00000077347 948 ntAPPRIS P2 BASIC7.24□□□□□ -1.25
Trim42Q9D2H5 Olfr1261-201ENSMUST00000077785 921 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Trim42Q9D2H5 n-R5s193-201ENSMUST00000082864 109 ntBASIC7.24□□□□□ -1.25
Trim42Q9D2H5 Gm25259-201ENSMUST00000083048 193 ntBASIC7.24□□□□□ -1.25
Trim42Q9D2H5 Larp1b-204ENSMUST00000099121 1030 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Trim42Q9D2H5 Gm42727-201ENSMUST00000202446 2823 ntBASIC7.24□□□□□ -1.25
Trim42Q9D2H5 CT009734.1-201ENSMUST00000227657 1687 ntBASIC7.24□□□□□ -1.25
Trim42Q9D2H5 Keg1-201ENSMUST00000025598 1676 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Trim42Q9D2H5 Gm43088-201ENSMUST00000197530 2347 ntBASIC7.24□□□□□ -1.25
Trim42Q9D2H5 Dcaf1-203ENSMUST00000161758 5539 ntTSL 5 BASIC7.24□□□□□ -1.25
Trim42Q9D2H5 Gm16325-201ENSMUST00000141199 3174 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Trim42Q9D2H5 CT009604.1-201ENSMUST00000223900 1328 ntBASIC7.24□□□□□ -1.25
Trim42Q9D2H5 BC080695-201ENSMUST00000105765 2102 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Trim42Q9D2H5 5031410I06Rik-201ENSMUST00000063524 2995 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Trim42Q9D2H5 Gm7347-201ENSMUST00000095004 2995 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Trim42Q9D2H5 AC114585.1-201ENSMUST00000228080 3680 ntBASIC7.23□□□□□ -1.25
Trim42Q9D2H5 Olfr25-202ENSMUST00000212354 1362 ntAPPRIS ALT2 BASIC7.23□□□□□ -1.25
Trim42Q9D2H5 Olfr988-203ENSMUST00000215511 1906 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Trim42Q9D2H5 Slco1c1-201ENSMUST00000032362 3178 ntAPPRIS P2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Trim42Q9D2H5 AC107232.1-201ENSMUST00000227785 1503 ntBASIC7.23□□□□□ -1.25
Trim42Q9D2H5 Taf1-201ENSMUST00000101341 8054 ntAPPRIS ALT2 TSL 2 BASIC7.23□□□□□ -1.25
Trim42Q9D2H5 Cd274-201ENSMUST00000016640 3622 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Trim42Q9D2H5 Olfr134-202ENSMUST00000215900 1670 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Trim42Q9D2H5 Gm38082-201ENSMUST00000192800 6882 ntBASIC7.23□□□□□ -1.25
Trim42Q9D2H5 Gm22438-201ENSMUST00000104049 132 ntBASIC7.23□□□□□ -1.25
Trim42Q9D2H5 Lrrc51-203ENSMUST00000106963 835 ntTSL 2 BASIC7.23□□□□□ -1.25
Trim42Q9D2H5 Lrrc51-205ENSMUST00000106965 743 ntTSL 3 BASIC7.23□□□□□ -1.25
Trim42Q9D2H5 Gm9427-201ENSMUST00000116187 651 ntBASIC7.23□□□□□ -1.25
Trim42Q9D2H5 Spin2-ps1-201ENSMUST00000116643 875 ntBASIC7.23□□□□□ -1.25
Trim42Q9D2H5 Gm6743-201ENSMUST00000117345 1066 ntBASIC7.23□□□□□ -1.25
Trim42Q9D2H5 Gm15715-201ENSMUST00000118032 283 ntBASIC7.23□□□□□ -1.25
Trim42Q9D2H5 Gm16383-201ENSMUST00000118122 232 ntBASIC7.23□□□□□ -1.25
Trim42Q9D2H5 Gm12604-201ENSMUST00000118382 380 ntBASIC7.23□□□□□ -1.25
Trim42Q9D2H5 Gm13006-201ENSMUST00000118683 214 ntBASIC7.23□□□□□ -1.25
Trim42Q9D2H5 Gm15753-201ENSMUST00000119241 1062 ntBASIC7.23□□□□□ -1.25
Trim42Q9D2H5 Gm4918-201ENSMUST00000119420 1084 ntBASIC7.23□□□□□ -1.25
Trim42Q9D2H5 Gm12920-201ENSMUST00000121818 1186 ntBASIC7.23□□□□□ -1.25
Trim42Q9D2H5 Snrpert-201ENSMUST00000121967 279 ntBASIC7.23□□□□□ -1.25
Trim42Q9D2H5 Gm3757-201ENSMUST00000125878 675 ntBASIC7.23□□□□□ -1.25
Trim42Q9D2H5 Gm22158-201ENSMUST00000158411 126 ntBASIC7.23□□□□□ -1.25
Trim42Q9D2H5 Gm26024-201ENSMUST00000158657 322 ntBASIC7.23□□□□□ -1.25
Trim42Q9D2H5 Ctla2b-202ENSMUST00000171347 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Trim42Q9D2H5 Spin2-ps6-201ENSMUST00000178459 525 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Trim42Q9D2H5 Trav9d-2-201ENSMUST00000178824 337 ntAPPRIS ALT2 BASIC7.23□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 88.4 ms