Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Clec4e-207ENSMUST00000177367 729 ntAPPRIS ALT2 TSL 3 BASIC6.94□□□□□ -1.3
Smc1aQ9CU62 Rpl31-ps23-201ENSMUST00000180440 388 ntBASIC6.94□□□□□ -1.3
Smc1aQ9CU62 Gm37974-201ENSMUST00000193668 220 ntTSL 3 BASIC6.94□□□□□ -1.3
Smc1aQ9CU62 Ighv8-2-201ENSMUST00000195037 359 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Smc1aQ9CU62 Olfr1295-201ENSMUST00000207283 1282 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
Smc1aQ9CU62 2310008N11Rik-204ENSMUST00000210955 457 ntTSL 5 BASIC6.94□□□□□ -1.3
Smc1aQ9CU62 Stx3-206ENSMUST00000211047 870 ntTSL 5 BASIC6.94□□□□□ -1.3
Smc1aQ9CU62 Gm18103-201ENSMUST00000216621 779 ntBASIC6.94□□□□□ -1.3
Smc1aQ9CU62 AC140930.1-201ENSMUST00000221889 389 ntBASIC6.94□□□□□ -1.3
Smc1aQ9CU62 AC161252.1-201ENSMUST00000225536 467 ntBASIC6.94□□□□□ -1.3
Smc1aQ9CU62 AC154795.1-201ENSMUST00000225611 364 ntBASIC6.94□□□□□ -1.3
Smc1aQ9CU62 CT009515.3-201ENSMUST00000226509 671 ntBASIC6.94□□□□□ -1.3
Smc1aQ9CU62 Snrpd1-201ENSMUST00000002551 837 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Smc1aQ9CU62 Tmed6-201ENSMUST00000034393 871 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Smc1aQ9CU62 Defb42-201ENSMUST00000067990 618 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Smc1aQ9CU62 Vmn1r30-201ENSMUST00000078890 1053 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Smc1aQ9CU62 Mir412-201ENSMUST00000083636 80 ntBASIC6.94□□□□□ -1.3
Smc1aQ9CU62 BC061195-201ENSMUST00000088133 577 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Smc1aQ9CU62 1700003E24Rik-201ENSMUST00000088134 577 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Smc1aQ9CU62 Fpr-rs4-201ENSMUST00000095651 972 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Smc1aQ9CU62 Olfr1039-201ENSMUST00000099910 960 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Smc1aQ9CU62 Psd3-214ENSMUST00000212960 4562 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
Smc1aQ9CU62 AC163032.1-201ENSMUST00000220671 2970 ntBASIC6.94□□□□□ -1.3
Smc1aQ9CU62 Sytl2-202ENSMUST00000107210 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Smc1aQ9CU62 Olfr1381-202ENSMUST00000213256 4954 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Smc1aQ9CU62 Sis-202ENSMUST00000167334 5953 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Smc1aQ9CU62 Ugt2a1-201ENSMUST00000147854 2570 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Smc1aQ9CU62 Elavl2-209ENSMUST00000107124 4127 ntAPPRIS ALT1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Smc1aQ9CU62 Crnn-201ENSMUST00000107300 1628 ntAPPRIS P1 TSL 3 BASIC6.94□□□□□ -1.3
Smc1aQ9CU62 Gm37079-201ENSMUST00000194114 2135 ntBASIC6.94□□□□□ -1.3
Smc1aQ9CU62 Gm18716-201ENSMUST00000204507 1603 ntBASIC6.94□□□□□ -1.3
Smc1aQ9CU62 Dnajc15-202ENSMUST00000226459 6193 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Smc1aQ9CU62 Zfa-ps-202ENSMUST00000180673 3420 ntBASIC6.94□□□□□ -1.3
Smc1aQ9CU62 Enpp2-202ENSMUST00000167541 2664 ntAPPRIS ALT1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Smc1aQ9CU62 Adgrg2-207ENSMUST00000112408 4708 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Smc1aQ9CU62 Slc35a5-201ENSMUST00000023344 4233 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Smc1aQ9CU62 Atp8b4-202ENSMUST00000040149 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Smc1aQ9CU62 Olfr1055-203ENSMUST00000213564 1444 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Smc1aQ9CU62 Olfr693-202ENSMUST00000215541 4015 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Smc1aQ9CU62 Gm12794-201ENSMUST00000052027 1452 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Smc1aQ9CU62 Gm37703-201ENSMUST00000192292 1784 ntBASIC6.93□□□□□ -1.3
Smc1aQ9CU62 Pik3c2a-204ENSMUST00000206219 5670 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Smc1aQ9CU62 Foxp2-204ENSMUST00000115472 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Smc1aQ9CU62 Gm21103-201ENSMUST00000112737 984 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
Smc1aQ9CU62 Gm4342-201ENSMUST00000118982 367 ntBASIC6.93□□□□□ -1.3
Smc1aQ9CU62 Gm13121-201ENSMUST00000120637 632 ntBASIC6.93□□□□□ -1.3
Smc1aQ9CU62 Gm14054-201ENSMUST00000120744 704 ntBASIC6.93□□□□□ -1.3
Smc1aQ9CU62 Mir1960-201ENSMUST00000157488 78 ntBASIC6.93□□□□□ -1.3
Smc1aQ9CU62 Gm3076-201ENSMUST00000161613 451 ntBASIC6.93□□□□□ -1.3
Smc1aQ9CU62 Gm9064-201ENSMUST00000163579 566 ntBASIC6.93□□□□□ -1.3
Smc1aQ9CU62 Gm3047-201ENSMUST00000164069 822 ntAPPRIS P5 TSL 5 BASIC6.93□□□□□ -1.3
Smc1aQ9CU62 Gm3029-201ENSMUST00000168306 984 ntAPPRIS P5 TSL 5 BASIC6.93□□□□□ -1.3
Smc1aQ9CU62 Gm25246-201ENSMUST00000175476 69 ntBASIC6.93□□□□□ -1.3
Smc1aQ9CU62 Mir7685-201ENSMUST00000183555 62 ntBASIC6.93□□□□□ -1.3
Smc1aQ9CU62 4833421G17Rik-201ENSMUST00000191704 844 ntBASIC6.93□□□□□ -1.3
Smc1aQ9CU62 Gm38122-201ENSMUST00000192679 885 ntBASIC6.93□□□□□ -1.3
Smc1aQ9CU62 Gm37573-201ENSMUST00000193993 931 ntTSL 5 BASIC6.93□□□□□ -1.3
Smc1aQ9CU62 Gm36793-201ENSMUST00000199211 922 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Smc1aQ9CU62 Gm44243-201ENSMUST00000204323 692 ntBASIC6.93□□□□□ -1.3
Smc1aQ9CU62 Mageb16-ps2-201ENSMUST00000204513 1093 ntBASIC6.93□□□□□ -1.3
Smc1aQ9CU62 Gm18838-201ENSMUST00000204855 886 ntBASIC6.93□□□□□ -1.3
Smc1aQ9CU62 Gm18805-201ENSMUST00000206872 655 ntBASIC6.93□□□□□ -1.3
Smc1aQ9CU62 AC165292.1-201ENSMUST00000215218 620 ntBASIC6.93□□□□□ -1.3
Smc1aQ9CU62 AC132384.8-201ENSMUST00000218152 1204 ntBASIC6.93□□□□□ -1.3
Smc1aQ9CU62 Gm8633-201ENSMUST00000218457 558 ntTSL 3 BASIC6.93□□□□□ -1.3
Smc1aQ9CU62 AC159238.1-201ENSMUST00000220699 343 ntTSL 3 BASIC6.93□□□□□ -1.3
Smc1aQ9CU62 AC154755.1-201ENSMUST00000225244 537 ntBASIC6.93□□□□□ -1.3
Smc1aQ9CU62 AC131033.2-201ENSMUST00000228138 1011 ntBASIC6.93□□□□□ -1.3
Smc1aQ9CU62 Olfr1122-201ENSMUST00000056435 1080 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Smc1aQ9CU62 Tas2r119-201ENSMUST00000057633 1006 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Smc1aQ9CU62 Olfr965-201ENSMUST00000069342 939 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Smc1aQ9CU62 Olfr1337-201ENSMUST00000077247 951 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Smc1aQ9CU62 Olfr597-201ENSMUST00000098203 948 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Smc1aQ9CU62 Serpina10-201ENSMUST00000044231 3498 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Smc1aQ9CU62 Vmn2r96-201ENSMUST00000165692 2343 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Smc1aQ9CU62 Gm156-202ENSMUST00000118532 2000 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Smc1aQ9CU62 Krcc1-202ENSMUST00000168700 1749 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Smc1aQ9CU62 Cnot4-201ENSMUST00000044163 3337 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Smc1aQ9CU62 Akt3-202ENSMUST00000111159 4906 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Smc1aQ9CU62 Tcf7l2-202ENSMUST00000061496 4053 ntAPPRIS P3 TSL 5 BASIC6.92□□□□□ -1.3
Smc1aQ9CU62 Nlrp9a-203ENSMUST00000117252 2796 ntTSL 2 BASIC6.92□□□□□ -1.3
Smc1aQ9CU62 Olfr537-ps1-201ENSMUST00000209871 2792 ntAPPRIS P1 TSL 3 BASIC6.92□□□□□ -1.3
Smc1aQ9CU62 Yae1d1-201ENSMUST00000099735 8744 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Smc1aQ9CU62 Gm4991-201ENSMUST00000118899 1552 ntBASIC6.92□□□□□ -1.3
Smc1aQ9CU62 BC064078-202ENSMUST00000131176 2299 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Smc1aQ9CU62 Gm40987-202ENSMUST00000221856 1588 ntTSL 5 BASIC6.92□□□□□ -1.3
Smc1aQ9CU62 Iqub-201ENSMUST00000052277 3651 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Smc1aQ9CU62 Olfr55-203ENSMUST00000214891 4428 ntTSL 5 BASIC6.92□□□□□ -1.3
Smc1aQ9CU62 Olfr616-202ENSMUST00000214806 1641 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Smc1aQ9CU62 Trbv13-2-201ENSMUST00000103270 340 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Smc1aQ9CU62 Tcrg-V7-201ENSMUST00000103553 368 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Smc1aQ9CU62 Gm4853-201ENSMUST00000119359 394 ntBASIC6.92□□□□□ -1.3
Smc1aQ9CU62 Gm14712-201ENSMUST00000120195 772 ntBASIC6.92□□□□□ -1.3
Smc1aQ9CU62 AI646519-201ENSMUST00000140987 351 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Smc1aQ9CU62 Gm22214-201ENSMUST00000157563 172 ntBASIC6.92□□□□□ -1.3
Smc1aQ9CU62 Gm17079-201ENSMUST00000167231 666 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Smc1aQ9CU62 Gm8919-201ENSMUST00000182028 1014 ntBASIC6.92□□□□□ -1.3
Smc1aQ9CU62 1810053B23Rik-201ENSMUST00000185242 634 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Smc1aQ9CU62 Gm38217-201ENSMUST00000194358 910 ntBASIC6.92□□□□□ -1.3
Smc1aQ9CU62 Olrf445-ps1-201ENSMUST00000204960 314 ntBASIC6.92□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms