Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Gm16833-202ENSMUST00000189204 672 ntTSL 2 BASIC4.84□□□□□ -1.63
Nup35Q8R4R6 Gm29345-201ENSMUST00000189213 399 ntTSL 3 BASIC4.84□□□□□ -1.63
Nup35Q8R4R6 1700025B11Rik-201ENSMUST00000190233 553 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Nup35Q8R4R6 Gm37974-201ENSMUST00000193668 220 ntTSL 3 BASIC4.84□□□□□ -1.63
Nup35Q8R4R6 Igkv4-77-201ENSMUST00000199410 352 ntBASIC4.84□□□□□ -1.63
Nup35Q8R4R6 Gm43538-201ENSMUST00000200416 849 ntTSL 3 BASIC4.84□□□□□ -1.63
Nup35Q8R4R6 Gm44053-201ENSMUST00000203364 929 ntBASIC4.84□□□□□ -1.63
Nup35Q8R4R6 Gm39090-201ENSMUST00000205284 972 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Nup35Q8R4R6 Gm33248-201ENSMUST00000205836 617 ntTSL 3 BASIC4.84□□□□□ -1.63
Nup35Q8R4R6 Gm45607-201ENSMUST00000211143 678 ntTSL 3 BASIC4.84□□□□□ -1.63
Nup35Q8R4R6 Gm18329-201ENSMUST00000215832 589 ntBASIC4.84□□□□□ -1.63
Nup35Q8R4R6 AC079680.1-201ENSMUST00000218730 649 ntTSL 5 BASIC4.84□□□□□ -1.63
Nup35Q8R4R6 AC153936.1-201ENSMUST00000219874 395 ntBASIC4.84□□□□□ -1.63
Nup35Q8R4R6 Gm2022-201ENSMUST00000220585 435 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Nup35Q8R4R6 Gm8607-201ENSMUST00000221864 431 ntBASIC4.84□□□□□ -1.63
Nup35Q8R4R6 Tpbpb-202ENSMUST00000223698 746 ntAPPRIS P2 BASIC4.84□□□□□ -1.63
Nup35Q8R4R6 AC164302.1-201ENSMUST00000227036 433 ntBASIC4.84□□□□□ -1.63
Nup35Q8R4R6 CT025686.1-201ENSMUST00000227592 438 ntBASIC4.84□□□□□ -1.63
Nup35Q8R4R6 AC159979.1-201ENSMUST00000227927 342 ntBASIC4.84□□□□□ -1.63
Nup35Q8R4R6 Orm1-201ENSMUST00000030044 775 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Nup35Q8R4R6 Olfr267-201ENSMUST00000059608 944 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Nup35Q8R4R6 Morn2-201ENSMUST00000061703 644 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Nup35Q8R4R6 Olfr535-201ENSMUST00000074897 991 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Nup35Q8R4R6 Orm2-201ENSMUST00000075341 775 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Nup35Q8R4R6 Magea6-201ENSMUST00000076986 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Nup35Q8R4R6 Gm8412-201ENSMUST00000077493 440 ntBASIC4.84□□□□□ -1.63
Nup35Q8R4R6 Gm23624-201ENSMUST00000082463 321 ntBASIC4.84□□□□□ -1.63
Nup35Q8R4R6 Mef2c-203ENSMUST00000185052 3556 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Nup35Q8R4R6 Trps1-203ENSMUST00000183421 3446 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Nup35Q8R4R6 Olfr1342-202ENSMUST00000216226 3269 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
Nup35Q8R4R6 Gm44209-201ENSMUST00000204556 4153 ntBASIC4.84□□□□□ -1.64
Nup35Q8R4R6 Slc7a2-203ENSMUST00000117077 7626 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.64
Nup35Q8R4R6 Serpinb11-201ENSMUST00000027566 2084 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
Nup35Q8R4R6 Gm156-202ENSMUST00000118532 2000 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
Nup35Q8R4R6 Zfp27-204ENSMUST00000161904 3090 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Nup35Q8R4R6 Cxcl11-202ENSMUST00000122808 3794 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Nup35Q8R4R6 CT009754.3-201ENSMUST00000220739 3661 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Nup35Q8R4R6 AC127281.1-201ENSMUST00000221075 3667 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Nup35Q8R4R6 Agbl2-202ENSMUST00000037219 3462 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Nup35Q8R4R6 Gm18908-201ENSMUST00000207125 1483 ntBASIC4.83□□□□□ -1.64
Nup35Q8R4R6 Ctsm-201ENSMUST00000099451 1457 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Nup35Q8R4R6 Tgif1-210ENSMUST00000172229 1446 ntAPPRIS ALT1 TSL 3 BASIC4.83□□□□□ -1.64
Nup35Q8R4R6 Izumo3-201ENSMUST00000107108 1252 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Nup35Q8R4R6 4930503H13Rik-201ENSMUST00000118320 725 ntBASIC4.83□□□□□ -1.64
Nup35Q8R4R6 Gm8644-201ENSMUST00000118619 596 ntBASIC4.83□□□□□ -1.64
Nup35Q8R4R6 Apc-ps1-201ENSMUST00000119356 470 ntBASIC4.83□□□□□ -1.64
Nup35Q8R4R6 Gm14267-201ENSMUST00000119751 496 ntBASIC4.83□□□□□ -1.64
Nup35Q8R4R6 Gm11227-201ENSMUST00000119774 471 ntBASIC4.83□□□□□ -1.64
Nup35Q8R4R6 Gm15502-201ENSMUST00000121449 208 ntBASIC4.83□□□□□ -1.64
Nup35Q8R4R6 Prlr-204ENSMUST00000128450 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Nup35Q8R4R6 Gm12610-201ENSMUST00000139272 581 ntTSL 3 BASIC4.83□□□□□ -1.64
Nup35Q8R4R6 Gm23279-201ENSMUST00000157912 97 ntBASIC4.83□□□□□ -1.64
Nup35Q8R4R6 Gm8220-202ENSMUST00000169601 525 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Nup35Q8R4R6 Gm3344-201ENSMUST00000169610 603 ntBASIC4.83□□□□□ -1.64
Nup35Q8R4R6 Gm8922-201ENSMUST00000170057 1167 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Nup35Q8R4R6 Gm20454-201ENSMUST00000172713 221 ntBASIC4.83□□□□□ -1.64
Nup35Q8R4R6 Obox6-ps1-201ENSMUST00000176658 1042 ntBASIC4.83□□□□□ -1.64
Nup35Q8R4R6 Pid1-205ENSMUST00000176720 450 ntTSL 5 BASIC4.83□□□□□ -1.64
Nup35Q8R4R6 Gm5225-201ENSMUST00000178572 324 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Nup35Q8R4R6 Mir6940-201ENSMUST00000183447 70 ntBASIC4.83□□□□□ -1.64
Nup35Q8R4R6 Gm27601-201ENSMUST00000184794 127 ntBASIC4.83□□□□□ -1.64
Nup35Q8R4R6 Gm29383-201ENSMUST00000188284 480 ntBASIC4.83□□□□□ -1.64
Nup35Q8R4R6 Gm18407-201ENSMUST00000192126 790 ntBASIC4.83□□□□□ -1.64
Nup35Q8R4R6 Gm38068-201ENSMUST00000192546 540 ntBASIC4.83□□□□□ -1.64
Nup35Q8R4R6 Ighv8-2-201ENSMUST00000195037 359 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Nup35Q8R4R6 Gm18427-201ENSMUST00000195422 515 ntBASIC4.83□□□□□ -1.64
Nup35Q8R4R6 Gm43779-201ENSMUST00000196691 829 ntBASIC4.83□□□□□ -1.64
Nup35Q8R4R6 Gm43354-201ENSMUST00000196862 346 ntBASIC4.83□□□□□ -1.64
Nup35Q8R4R6 Gm43400-201ENSMUST00000197294 1254 ntTSL 5 BASIC4.83□□□□□ -1.64
Nup35Q8R4R6 Ass-ps1-201ENSMUST00000197717 761 ntBASIC4.83□□□□□ -1.64
Nup35Q8R4R6 Gm38413-201ENSMUST00000197852 348 ntTSL 2 BASIC4.83□□□□□ -1.64
Nup35Q8R4R6 Gm43646-201ENSMUST00000199962 464 ntTSL 3 BASIC4.83□□□□□ -1.64
Nup35Q8R4R6 1700013A02Rik-201ENSMUST00000202969 645 ntBASIC4.83□□□□□ -1.64
Nup35Q8R4R6 Gm3549-201ENSMUST00000203873 794 ntBASIC4.83□□□□□ -1.64
Nup35Q8R4R6 Gm18600-201ENSMUST00000207205 505 ntBASIC4.83□□□□□ -1.64
Nup35Q8R4R6 Gm20136-201ENSMUST00000207501 891 ntBASIC4.83□□□□□ -1.64
Nup35Q8R4R6 Gm31763-203ENSMUST00000219739 1025 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Nup35Q8R4R6 Gm19186-201ENSMUST00000219922 333 ntBASIC4.83□□□□□ -1.64
Nup35Q8R4R6 AC159208.1-201ENSMUST00000221403 649 ntBASIC4.83□□□□□ -1.64
Nup35Q8R4R6 Ms4a4b-201ENSMUST00000035258 1244 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Nup35Q8R4R6 Gm9985-201ENSMUST00000044101 510 ntBASIC4.83□□□□□ -1.64
Nup35Q8R4R6 Olfr1386-201ENSMUST00000071905 1128 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Nup35Q8R4R6 Lats2-203ENSMUST00000077981 786 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Nup35Q8R4R6 Olfr826-201ENSMUST00000078322 942 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Nup35Q8R4R6 Sprr2a3-201ENSMUST00000090872 682 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Nup35Q8R4R6 Gm42503-201ENSMUST00000199080 3706 ntBASIC4.83□□□□□ -1.64
Nup35Q8R4R6 Ppp2r3a-201ENSMUST00000066773 4461 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Nup35Q8R4R6 Rnd3-201ENSMUST00000017288 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Nup35Q8R4R6 Mbtd1-204ENSMUST00000107852 1930 ntTSL 5 BASIC4.83□□□□□ -1.64
Nup35Q8R4R6 Lrp2bp-203ENSMUST00000110381 3421 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Nup35Q8R4R6 Impact-201ENSMUST00000025290 3432 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Nup35Q8R4R6 Gm42725-201ENSMUST00000199296 4193 ntBASIC4.83□□□□□ -1.64
Nup35Q8R4R6 Kif18a-201ENSMUST00000028527 3369 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Nup35Q8R4R6 Vmn2r79-201ENSMUST00000164462 2556 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Nup35Q8R4R6 Gm26789-201ENSMUST00000181342 2502 ntTSL 5 BASIC4.83□□□□□ -1.64
Nup35Q8R4R6 Atp2c1-202ENSMUST00000085133 4665 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Nup35Q8R4R6 Asah2-201ENSMUST00000096119 4682 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Nup35Q8R4R6 Gm42992-201ENSMUST00000197043 6836 ntBASIC4.83□□□□□ -1.64
Nup35Q8R4R6 Crem-230ENSMUST00000151311 2485 ntAPPRIS ALT1 TSL 5 BASIC4.83□□□□□ -1.64
Nup35Q8R4R6 Gm44229-201ENSMUST00000203211 2487 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 83.1 ms