Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Mir7033-201ENSMUST00000184259 81 ntBASIC6.01□□□□□ -1.45
Ccdc28bQ8CEG5 Gm28156-201ENSMUST00000187880 1136 ntTSL 5 BASIC6.01□□□□□ -1.45
Ccdc28bQ8CEG5 Gm28985-201ENSMUST00000189261 356 ntTSL 5 BASIC6.01□□□□□ -1.45
Ccdc28bQ8CEG5 Gm37592-201ENSMUST00000192741 373 ntTSL 5 BASIC6.01□□□□□ -1.45
Ccdc28bQ8CEG5 4930480K02Rik-201ENSMUST00000203679 1054 ntBASIC6.01□□□□□ -1.45
Ccdc28bQ8CEG5 Gm7972-201ENSMUST00000208434 1137 ntBASIC6.01□□□□□ -1.45
Ccdc28bQ8CEG5 Gm34368-201ENSMUST00000209512 1111 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Ccdc28bQ8CEG5 Gm45722-201ENSMUST00000213075 466 ntBASIC6.01□□□□□ -1.45
Ccdc28bQ8CEG5 AC159622.2-201ENSMUST00000221592 983 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Ccdc28bQ8CEG5 AC122937.2-201ENSMUST00000228258 1051 ntBASIC6.01□□□□□ -1.45
Ccdc28bQ8CEG5 Rps27a-ps2-201ENSMUST00000078766 467 ntBASIC6.01□□□□□ -1.45
Ccdc28bQ8CEG5 Olfr441-201ENSMUST00000095954 933 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Ccdc28bQ8CEG5 Rabgap1-201ENSMUST00000061179 4967 ntAPPRIS P4 TSL 1 (best) BASIC6.01□□□□□ -1.45
Ccdc28bQ8CEG5 Clmn-201ENSMUST00000109936 11866 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Ccdc28bQ8CEG5 AC117608.2-201ENSMUST00000224124 1363 ntBASIC6.01□□□□□ -1.45
Ccdc28bQ8CEG5 Anks1b-201ENSMUST00000099364 1383 ntTSL 5 BASIC6.01□□□□□ -1.45
Ccdc28bQ8CEG5 Ralyl-203ENSMUST00000171075 1459 ntTSL 5 BASIC6.01□□□□□ -1.45
Ccdc28bQ8CEG5 Gm42725-201ENSMUST00000199296 4193 ntBASIC6.01□□□□□ -1.45
Ccdc28bQ8CEG5 A630031M04Rik-201ENSMUST00000146587 3568 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Ccdc28bQ8CEG5 CT009754.3-201ENSMUST00000220739 3661 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Ccdc28bQ8CEG5 AC127281.1-201ENSMUST00000221075 3667 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Ccdc28bQ8CEG5 Sel1l2-202ENSMUST00000122367 2216 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Ccdc28bQ8CEG5 Lmbrd2-201ENSMUST00000090380 3210 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Ccdc28bQ8CEG5 Pik3c2g-212ENSMUST00000190962 1774 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Ccdc28bQ8CEG5 Olfr671-202ENSMUST00000210963 3157 ntTSL 5 BASIC6□□□□□ -1.45
Ccdc28bQ8CEG5 Gm45493-201ENSMUST00000209494 3948 ntBASIC6□□□□□ -1.45
Ccdc28bQ8CEG5 Gm44895-201ENSMUST00000206670 1538 ntBASIC6□□□□□ -1.45
Ccdc28bQ8CEG5 Cr2-202ENSMUST00000082321 6207 ntTSL 1 (best) BASIC6□□□□□ -1.45
Ccdc28bQ8CEG5 Vmn2r107-201ENSMUST00000042090 2586 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Ccdc28bQ8CEG5 Enpp3-201ENSMUST00000020169 4253 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Ccdc28bQ8CEG5 Gm15074-201ENSMUST00000117603 936 ntBASIC6□□□□□ -1.45
Ccdc28bQ8CEG5 Gm8692-201ENSMUST00000118102 438 ntBASIC6□□□□□ -1.45
Ccdc28bQ8CEG5 Gm13744-201ENSMUST00000118953 850 ntBASIC6□□□□□ -1.45
Ccdc28bQ8CEG5 Gm15153-201ENSMUST00000119867 274 ntBASIC6□□□□□ -1.45
Ccdc28bQ8CEG5 Gm5166-201ENSMUST00000121332 573 ntBASIC6□□□□□ -1.45
Ccdc28bQ8CEG5 4930586N03Rik-201ENSMUST00000122940 881 ntTSL 1 (best) BASIC6□□□□□ -1.45
Ccdc28bQ8CEG5 Gm14110-201ENSMUST00000127688 758 ntTSL 5 BASIC6□□□□□ -1.45
Ccdc28bQ8CEG5 Gm12107-201ENSMUST00000132857 889 ntTSL 5 BASIC6□□□□□ -1.45
Ccdc28bQ8CEG5 Gm15122-201ENSMUST00000135434 462 ntTSL 2 BASIC6□□□□□ -1.45
Ccdc28bQ8CEG5 Gm13029-201ENSMUST00000137283 594 ntTSL 3 BASIC6□□□□□ -1.45
Ccdc28bQ8CEG5 Gm25435-201ENSMUST00000158277 267 ntBASIC6□□□□□ -1.45
Ccdc28bQ8CEG5 Dab2-209ENSMUST00000161040 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Ccdc28bQ8CEG5 Tcrg-C4-201ENSMUST00000179181 985 ntAPPRIS P1 BASIC6□□□□□ -1.45
Ccdc28bQ8CEG5 Gm20257-201ENSMUST00000185352 936 ntTSL 1 (best) BASIC6□□□□□ -1.45
Ccdc28bQ8CEG5 Gm19480-201ENSMUST00000185547 667 ntBASIC6□□□□□ -1.45
Ccdc28bQ8CEG5 4930568A12Rik-201ENSMUST00000186117 498 ntTSL 3 BASIC6□□□□□ -1.45
Ccdc28bQ8CEG5 Snhg14-205ENSMUST00000186345 456 ntTSL 5 BASIC6□□□□□ -1.45
Ccdc28bQ8CEG5 Gm21139-201ENSMUST00000186594 877 ntBASIC6□□□□□ -1.45
Ccdc28bQ8CEG5 Gm18352-201ENSMUST00000189113 902 ntBASIC6□□□□□ -1.45
Ccdc28bQ8CEG5 Gm37293-201ENSMUST00000191658 295 ntBASIC6□□□□□ -1.45
Ccdc28bQ8CEG5 Gm2229-201ENSMUST00000193328 710 ntBASIC6□□□□□ -1.45
Ccdc28bQ8CEG5 Gm34716-201ENSMUST00000194060 621 ntTSL 5 BASIC6□□□□□ -1.45
Ccdc28bQ8CEG5 Gm37758-201ENSMUST00000194275 629 ntBASIC6□□□□□ -1.45
Ccdc28bQ8CEG5 Gm30353-202ENSMUST00000195486 622 ntTSL 1 (best) BASIC6□□□□□ -1.45
Ccdc28bQ8CEG5 Gm2287-201ENSMUST00000197417 1084 ntBASIC6□□□□□ -1.45
Ccdc28bQ8CEG5 Gm43467-201ENSMUST00000197441 437 ntBASIC6□□□□□ -1.45
Ccdc28bQ8CEG5 Gm29736-201ENSMUST00000198189 385 ntBASIC6□□□□□ -1.45
Ccdc28bQ8CEG5 Gm29781-201ENSMUST00000203862 478 ntBASIC6□□□□□ -1.45
Ccdc28bQ8CEG5 Gm44075-201ENSMUST00000204208 216 ntBASIC6□□□□□ -1.45
Ccdc28bQ8CEG5 Gm44036-201ENSMUST00000204551 336 ntTSL 3 BASIC6□□□□□ -1.45
Ccdc28bQ8CEG5 Gm44199-201ENSMUST00000205219 739 ntTSL 3 BASIC6□□□□□ -1.45
Ccdc28bQ8CEG5 Gm5318-201ENSMUST00000205249 406 ntBASIC6□□□□□ -1.45
Ccdc28bQ8CEG5 Gm44707-201ENSMUST00000206293 1216 ntTSL 5 BASIC6□□□□□ -1.45
Ccdc28bQ8CEG5 Gm31510-202ENSMUST00000206795 239 ntTSL 3 BASIC6□□□□□ -1.45
Ccdc28bQ8CEG5 Rfpl4-203ENSMUST00000208468 1238 ntAPPRIS ALT2 TSL 2 BASIC6□□□□□ -1.45
Ccdc28bQ8CEG5 Gm18586-201ENSMUST00000217265 518 ntBASIC6□□□□□ -1.45
Ccdc28bQ8CEG5 Prl2c2-203ENSMUST00000221612 596 ntTSL 1 (best) BASIC6□□□□□ -1.45
Ccdc28bQ8CEG5 AC105950.1-201ENSMUST00000222637 408 ntBASIC6□□□□□ -1.45
Ccdc28bQ8CEG5 AC154250.1-201ENSMUST00000224775 489 ntBASIC6□□□□□ -1.45
Ccdc28bQ8CEG5 AV026068-237ENSMUST00000226075 572 ntBASIC6□□□□□ -1.45
Ccdc28bQ8CEG5 AC133958.1-201ENSMUST00000227085 961 ntBASIC6□□□□□ -1.45
Ccdc28bQ8CEG5 AC154806.5-205ENSMUST00000228828 411 ntBASIC6□□□□□ -1.45
Ccdc28bQ8CEG5 Olfr548-ps1-201ENSMUST00000098228 933 ntBASIC6□□□□□ -1.45
Ccdc28bQ8CEG5 Olfr201-201ENSMUST00000099656 927 ntAPPRIS P1 BASIC6□□□□□ -1.45
Ccdc28bQ8CEG5 Tmem45a2-201ENSMUST00000067173 3073 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
Ccdc28bQ8CEG5 Klrk1-205ENSMUST00000168919 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Ccdc28bQ8CEG5 Usp17lc-202ENSMUST00000106892 2403 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Ccdc28bQ8CEG5 Gm26535-201ENSMUST00000181602 2600 ntTSL 1 (best) BASIC6□□□□□ -1.45
Ccdc28bQ8CEG5 Malrd1-201ENSMUST00000146205 6738 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Ccdc28bQ8CEG5 Zzz3-210ENSMUST00000200570 2491 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
Ccdc28bQ8CEG5 Gm37551-201ENSMUST00000195556 2861 ntBASIC6□□□□□ -1.45
Ccdc28bQ8CEG5 Gm39214-201ENSMUST00000210912 1542 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Ccdc28bQ8CEG5 Gm19113-201ENSMUST00000217552 1828 ntBASIC5.99□□□□□ -1.45
Ccdc28bQ8CEG5 Enox2-209ENSMUST00000167659 3632 ntTSL 5 BASIC5.99□□□□□ -1.45
Ccdc28bQ8CEG5 Gm43466-201ENSMUST00000197836 5214 ntBASIC5.99□□□□□ -1.45
Ccdc28bQ8CEG5 Ceacam2-202ENSMUST00000064862 3087 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Ccdc28bQ8CEG5 Fancd2-201ENSMUST00000036340 5512 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ccdc28bQ8CEG5 Herc2-202ENSMUST00000164095 15261 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ccdc28bQ8CEG5 Fat1-203ENSMUST00000189017 14651 ntTSL 5 BASIC5.99□□□□□ -1.45
Ccdc28bQ8CEG5 Gm26994-201ENSMUST00000182027 1571 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Ccdc28bQ8CEG5 Gm43526-201ENSMUST00000196666 1565 ntBASIC5.99□□□□□ -1.45
Ccdc28bQ8CEG5 Gm28475-201ENSMUST00000187645 1497 ntTSL 5 BASIC5.99□□□□□ -1.45
Ccdc28bQ8CEG5 Cbll1-203ENSMUST00000101499 3900 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ccdc28bQ8CEG5 Gm2178-201ENSMUST00000104927 357 ntBASIC5.99□□□□□ -1.45
Ccdc28bQ8CEG5 Spin2-ps2-201ENSMUST00000116186 778 ntBASIC5.99□□□□□ -1.45
Ccdc28bQ8CEG5 Gm11726-201ENSMUST00000121028 424 ntBASIC5.99□□□□□ -1.45
Ccdc28bQ8CEG5 Gm12066-201ENSMUST00000123592 443 ntTSL 3 BASIC5.99□□□□□ -1.45
Ccdc28bQ8CEG5 Gm16249-201ENSMUST00000124055 1258 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Ccdc28bQ8CEG5 Halr1-201ENSMUST00000125374 391 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Ccdc28bQ8CEG5 Six3os1-204ENSMUST00000161688 567 ntTSL 3 BASIC5.99□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 105.6 ms