Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm20778-201ENSMUST00000178524 627 ntBASIC6.2□□□□□ -1.42
Trub1Q8C0D0 1700108F19Rik-203ENSMUST00000188798 619 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Trub1Q8C0D0 Gm28086-201ENSMUST00000191586 317 ntTSL 5 BASIC6.2□□□□□ -1.42
Trub1Q8C0D0 Gm36328-201ENSMUST00000204237 432 ntTSL 3 BASIC6.2□□□□□ -1.42
Trub1Q8C0D0 1700051K13Rik-201ENSMUST00000204426 696 ntBASIC6.2□□□□□ -1.42
Trub1Q8C0D0 Gm19182-201ENSMUST00000207139 577 ntBASIC6.2□□□□□ -1.42
Trub1Q8C0D0 Gm45156-201ENSMUST00000207255 439 ntBASIC6.2□□□□□ -1.42
Trub1Q8C0D0 Gm7570-201ENSMUST00000215246 698 ntBASIC6.2□□□□□ -1.42
Trub1Q8C0D0 Gm9088-201ENSMUST00000220237 508 ntBASIC6.2□□□□□ -1.42
Trub1Q8C0D0 AC124537.2-201ENSMUST00000220872 883 ntTSL 5 BASIC6.2□□□□□ -1.42
Trub1Q8C0D0 AC163621.3-201ENSMUST00000221738 1033 ntTSL 5 BASIC6.2□□□□□ -1.42
Trub1Q8C0D0 AC113125.2-201ENSMUST00000226837 362 ntBASIC6.2□□□□□ -1.42
Trub1Q8C0D0 Tmem253-204ENSMUST00000228408 415 ntAPPRIS ALT2 BASIC6.2□□□□□ -1.42
Trub1Q8C0D0 Gm8256-203ENSMUST00000228692 591 ntBASIC6.2□□□□□ -1.42
Trub1Q8C0D0 Snrpd1-201ENSMUST00000002551 837 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Trub1Q8C0D0 Eri2-202ENSMUST00000063902 1241 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Trub1Q8C0D0 Gm3512-201ENSMUST00000090663 441 ntTSL 5 BASIC6.2□□□□□ -1.42
Trub1Q8C0D0 Rpl29-202ENSMUST00000098994 583 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
Trub1Q8C0D0 C230099D08Rik-201ENSMUST00000215772 2727 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Trub1Q8C0D0 Ttll6-202ENSMUST00000167258 3205 ntAPPRIS P2 TSL 5 BASIC6.2□□□□□ -1.42
Trub1Q8C0D0 Vmn1r45-204ENSMUST00000227426 3205 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Trub1Q8C0D0 Olfr527-202ENSMUST00000214143 3094 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Trub1Q8C0D0 Kcnmb2-202ENSMUST00000119970 2919 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Trub1Q8C0D0 Smarca2-203ENSMUST00000112637 1962 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Trub1Q8C0D0 Zfp473-203ENSMUST00000120074 3624 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
Trub1Q8C0D0 Cd200r3-206ENSMUST00000114622 1339 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Trub1Q8C0D0 Copg2-201ENSMUST00000048774 3961 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Trub1Q8C0D0 Zan-201ENSMUST00000117564 16481 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Trub1Q8C0D0 Kmt2c-201ENSMUST00000045291 14967 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Trub1Q8C0D0 Gm5868-201ENSMUST00000031124 1382 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Trub1Q8C0D0 Itih4-204ENSMUST00000168782 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Trub1Q8C0D0 Trpm3-203ENSMUST00000087576 6740 ntAPPRIS P5 TSL 1 (best) BASIC6.19□□□□□ -1.42
Trub1Q8C0D0 Pja2-201ENSMUST00000024888 4531 ntAPPRIS P4 TSL 5 BASIC6.19□□□□□ -1.42
Trub1Q8C0D0 9430098F02Rik-201ENSMUST00000180832 2986 ntTSL 5 BASIC6.19□□□□□ -1.42
Trub1Q8C0D0 Olfr976-202ENSMUST00000213171 2998 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Trub1Q8C0D0 Slco6b1-202ENSMUST00000178359 1778 ntBASIC6.19□□□□□ -1.42
Trub1Q8C0D0 Cd36-202ENSMUST00000165232 2708 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Trub1Q8C0D0 Igkv4-91-201ENSMUST00000103333 358 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Trub1Q8C0D0 Igkv4-74-201ENSMUST00000103344 394 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Trub1Q8C0D0 Gm13770-201ENSMUST00000117149 305 ntBASIC6.19□□□□□ -1.42
Trub1Q8C0D0 Prelid3b-202ENSMUST00000117442 683 ntTSL 3 BASIC6.19□□□□□ -1.42
Trub1Q8C0D0 Gm13183-201ENSMUST00000118615 789 ntBASIC6.19□□□□□ -1.42
Trub1Q8C0D0 Gm14375-201ENSMUST00000119490 855 ntBASIC6.19□□□□□ -1.42
Trub1Q8C0D0 Gm14842-201ENSMUST00000119577 269 ntBASIC6.19□□□□□ -1.42
Trub1Q8C0D0 Gm11879-201ENSMUST00000121885 702 ntBASIC6.19□□□□□ -1.42
Trub1Q8C0D0 Gm23757-201ENSMUST00000158353 100 ntBASIC6.19□□□□□ -1.42
Trub1Q8C0D0 Olfr92-201ENSMUST00000168659 939 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Trub1Q8C0D0 Wdr64-202ENSMUST00000171939 3823 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Trub1Q8C0D0 Mir6362-201ENSMUST00000184329 107 ntBASIC6.19□□□□□ -1.42
Trub1Q8C0D0 Gm27998-201ENSMUST00000184902 361 ntBASIC6.19□□□□□ -1.42
Trub1Q8C0D0 Gm28286-201ENSMUST00000188704 586 ntTSL 2 BASIC6.19□□□□□ -1.42
Trub1Q8C0D0 Igkv4-73-201ENSMUST00000199760 358 ntBASIC6.19□□□□□ -1.42
Trub1Q8C0D0 Api5-ps-201ENSMUST00000206607 577 ntBASIC6.19□□□□□ -1.42
Trub1Q8C0D0 AC153821.1-201ENSMUST00000217893 581 ntTSL 2 BASIC6.19□□□□□ -1.42
Trub1Q8C0D0 Nqo2-201ENSMUST00000021843 1063 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Trub1Q8C0D0 Gm34557-201ENSMUST00000223115 375 ntTSL 3 BASIC6.19□□□□□ -1.42
Trub1Q8C0D0 AC163664.2-201ENSMUST00000228894 459 ntBASIC6.19□□□□□ -1.42
Trub1Q8C0D0 Olfr732-201ENSMUST00000071208 1044 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Trub1Q8C0D0 Fam183b-202ENSMUST00000094156 567 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Trub1Q8C0D0 Olfr1312-201ENSMUST00000099600 954 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Trub1Q8C0D0 Ercc6l-201ENSMUST00000056904 5302 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Trub1Q8C0D0 4933411E08Rik-201ENSMUST00000217950 1689 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Trub1Q8C0D0 Clca3b-201ENSMUST00000159989 3361 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Trub1Q8C0D0 Gm5415-201ENSMUST00000171322 3609 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Trub1Q8C0D0 Stx17-202ENSMUST00000107720 5770 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Trub1Q8C0D0 Atf7-210ENSMUST00000184616 7147 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Trub1Q8C0D0 Shoc2-202ENSMUST00000169861 4065 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Trub1Q8C0D0 Olfr916-202ENSMUST00000213714 1380 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Trub1Q8C0D0 AC120375.1-201ENSMUST00000227034 3612 ntBASIC6.18□□□□□ -1.42
Trub1Q8C0D0 Ptprd-201ENSMUST00000050757 4698 ntTSL 5 BASIC6.18□□□□□ -1.42
Trub1Q8C0D0 Ipo5-201ENSMUST00000032898 4518 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Trub1Q8C0D0 Slc39a12-201ENSMUST00000082290 2675 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Trub1Q8C0D0 Olfr373-203ENSMUST00000215198 3923 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Trub1Q8C0D0 Vmn1r39-201ENSMUST00000226217 2258 ntAPPRIS P2 BASIC6.18□□□□□ -1.42
Trub1Q8C0D0 Vmn1r39-204ENSMUST00000227555 2297 ntAPPRIS P2 BASIC6.18□□□□□ -1.42
Trub1Q8C0D0 Vmn1r39-205ENSMUST00000228008 2283 ntAPPRIS ALT2 BASIC6.18□□□□□ -1.42
Trub1Q8C0D0 Gm10373-201ENSMUST00000100683 668 ntTSL 2 BASIC6.18□□□□□ -1.42
Trub1Q8C0D0 Xlr-203ENSMUST00000114810 984 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Trub1Q8C0D0 Rps12-ps16-201ENSMUST00000118529 399 ntBASIC6.18□□□□□ -1.42
Trub1Q8C0D0 Gm11624-201ENSMUST00000118579 1041 ntBASIC6.18□□□□□ -1.42
Trub1Q8C0D0 Gm6744-201ENSMUST00000119303 543 ntBASIC6.18□□□□□ -1.42
Trub1Q8C0D0 Rpl21-ps9-201ENSMUST00000119897 482 ntBASIC6.18□□□□□ -1.42
Trub1Q8C0D0 Scgb2b23-ps-201ENSMUST00000122094 330 ntBASIC6.18□□□□□ -1.42
Trub1Q8C0D0 Gm12152-201ENSMUST00000122465 684 ntBASIC6.18□□□□□ -1.42
Trub1Q8C0D0 AI847159-203ENSMUST00000141786 915 ntTSL 2 BASIC6.18□□□□□ -1.42
Trub1Q8C0D0 Gm14950-201ENSMUST00000149500 1155 ntTSL 5 BASIC6.18□□□□□ -1.42
Trub1Q8C0D0 Gm16132-201ENSMUST00000159296 598 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Trub1Q8C0D0 Scnm1-202ENSMUST00000173462 666 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
Trub1Q8C0D0 Rps12-ps13-201ENSMUST00000178365 399 ntBASIC6.18□□□□□ -1.42
Trub1Q8C0D0 Rps12-ps11-201ENSMUST00000178427 399 ntBASIC6.18□□□□□ -1.42
Trub1Q8C0D0 Prp2-202ENSMUST00000178961 951 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Trub1Q8C0D0 Rps12-ps12-201ENSMUST00000179020 399 ntBASIC6.18□□□□□ -1.42
Trub1Q8C0D0 Gm498-203ENSMUST00000179036 990 ntTSL 5 BASIC6.18□□□□□ -1.42
Trub1Q8C0D0 Rps12-ps17-201ENSMUST00000179067 399 ntBASIC6.18□□□□□ -1.42
Trub1Q8C0D0 Rps12-ps6-201ENSMUST00000179239 399 ntBASIC6.18□□□□□ -1.42
Trub1Q8C0D0 Rps12-ps14-201ENSMUST00000179356 399 ntBASIC6.18□□□□□ -1.42
Trub1Q8C0D0 Rps12-ps18-201ENSMUST00000179420 399 ntBASIC6.18□□□□□ -1.42
Trub1Q8C0D0 Rps12-ps15-201ENSMUST00000179567 399 ntBASIC6.18□□□□□ -1.42
Trub1Q8C0D0 1700010L04Rik-203ENSMUST00000179662 1015 ntTSL 5 BASIC6.18□□□□□ -1.42
Trub1Q8C0D0 Rps12l1-201ENSMUST00000183090 399 ntBASIC6.18□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms