Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Klrb1-201ENSMUST00000112110 724 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Usp47Q8BY87 Rpl22-ps1-201ENSMUST00000118652 386 ntBASIC8.54□□□□□ -1.04
Usp47Q8BY87 Gm8061-201ENSMUST00000122380 350 ntBASIC8.54□□□□□ -1.04
Usp47Q8BY87 Gm11528-201ENSMUST00000156822 914 ntTSL 2 BASIC8.54□□□□□ -1.04
Usp47Q8BY87 Tmem258-204ENSMUST00000166412 447 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Usp47Q8BY87 Mir5125-201ENSMUST00000175240 79 ntBASIC8.54□□□□□ -1.04
Usp47Q8BY87 Scgb1b34-ps-201ENSMUST00000187959 331 ntBASIC8.54□□□□□ -1.04
Usp47Q8BY87 Gm28387-201ENSMUST00000189245 854 ntTSL 3 BASIC8.54□□□□□ -1.04
Usp47Q8BY87 Gm37609-201ENSMUST00000191778 678 ntBASIC8.54□□□□□ -1.04
Usp47Q8BY87 Gm2287-202ENSMUST00000199619 1000 ntBASIC8.54□□□□□ -1.04
Usp47Q8BY87 Gm45054-201ENSMUST00000206525 342 ntTSL 2 BASIC8.54□□□□□ -1.04
Usp47Q8BY87 Gm6070-201ENSMUST00000207275 419 ntBASIC8.54□□□□□ -1.04
Usp47Q8BY87 Rpl27a-ps2-201ENSMUST00000080234 450 ntBASIC8.54□□□□□ -1.04
Usp47Q8BY87 Gm23456-201ENSMUST00000083335 137 ntBASIC8.54□□□□□ -1.04
Usp47Q8BY87 9930111J21Rik2-202ENSMUST00000101295 5985 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Usp47Q8BY87 Gm20750-201ENSMUST00000194274 3515 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Usp47Q8BY87 Slc9a4-201ENSMUST00000027233 3962 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Usp47Q8BY87 Bnc2-201ENSMUST00000102820 4133 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
Usp47Q8BY87 Gm5512-201ENSMUST00000218013 1353 ntBASIC8.54□□□□□ -1.04
Usp47Q8BY87 Ogdh-202ENSMUST00000081894 4114 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Usp47Q8BY87 Ncoa2-202ENSMUST00000068304 8006 ntTSL 5 BASIC8.54□□□□□ -1.04
Usp47Q8BY87 Taf7-201ENSMUST00000066272 3302 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Usp47Q8BY87 Gm16092-201ENSMUST00000161449 2405 ntTSL 5 BASIC8.54□□□□□ -1.04
Usp47Q8BY87 Prkacb-204ENSMUST00000106138 3999 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Usp47Q8BY87 Wdr66-206ENSMUST00000163092 4009 ntTSL 5 BASIC8.54□□□□□ -1.04
Usp47Q8BY87 Adamts6-203ENSMUST00000224208 6480 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Usp47Q8BY87 AC110043.1-201ENSMUST00000220278 1627 ntBASIC8.53□□□□□ -1.04
Usp47Q8BY87 Gm15478-201ENSMUST00000145914 2172 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Usp47Q8BY87 Gm32736-201ENSMUST00000200427 2701 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Usp47Q8BY87 Ift80-201ENSMUST00000029347 3880 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Usp47Q8BY87 Rsrc2-219ENSMUST00000182955 1685 ntTSL 5 BASIC8.53□□□□□ -1.04
Usp47Q8BY87 Il18r1-205ENSMUST00000193793 1652 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Usp47Q8BY87 Tnik-206ENSMUST00000160518 3996 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
Usp47Q8BY87 Nr3c2-201ENSMUST00000034031 2955 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
Usp47Q8BY87 Ceacam12-202ENSMUST00000108483 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Usp47Q8BY87 Gm14245-201ENSMUST00000118939 1843 ntBASIC8.53□□□□□ -1.04
Usp47Q8BY87 Olfr1015-203ENSMUST00000215945 2479 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Usp47Q8BY87 Stk32a-201ENSMUST00000045477 3765 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Usp47Q8BY87 Mup3-202ENSMUST00000107472 916 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Usp47Q8BY87 Mir466f-4-201ENSMUST00000116930 121 ntBASIC8.53□□□□□ -1.04
Usp47Q8BY87 Gm13013-201ENSMUST00000119087 523 ntBASIC8.53□□□□□ -1.04
Usp47Q8BY87 Gm13489-201ENSMUST00000121234 971 ntBASIC8.53□□□□□ -1.04
Usp47Q8BY87 Gm25459-201ENSMUST00000157953 114 ntBASIC8.53□□□□□ -1.04
Usp47Q8BY87 Gm23662-201ENSMUST00000158046 111 ntBASIC8.53□□□□□ -1.04
Usp47Q8BY87 Mirt2-201ENSMUST00000175179 285 ntBASIC8.53□□□□□ -1.04
Usp47Q8BY87 Gm498-203ENSMUST00000179036 990 ntTSL 5 BASIC8.53□□□□□ -1.04
Usp47Q8BY87 Mir7008-201ENSMUST00000184398 63 ntBASIC8.53□□□□□ -1.04
Usp47Q8BY87 Gm28066-201ENSMUST00000188657 472 ntBASIC8.53□□□□□ -1.04
Usp47Q8BY87 A830029E22Rik-201ENSMUST00000193672 1194 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Usp47Q8BY87 AL669819.1-201ENSMUST00000225143 330 ntBASIC8.53□□□□□ -1.04
Usp47Q8BY87 Olfr646-201ENSMUST00000098182 939 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Usp47Q8BY87 Sox5-201ENSMUST00000038815 7243 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Usp47Q8BY87 Scp2-ps2-203ENSMUST00000216438 1370 ntBASIC8.53□□□□□ -1.04
Usp47Q8BY87 AC124421.1-201ENSMUST00000219114 4154 ntBASIC8.53□□□□□ -1.04
Usp47Q8BY87 Luzp1-201ENSMUST00000001116 7246 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Usp47Q8BY87 Gm7155-201ENSMUST00000121143 1671 ntBASIC8.53□□□□□ -1.04
Usp47Q8BY87 Txndc9-201ENSMUST00000162031 3381 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Usp47Q8BY87 Olfr110-202ENSMUST00000216472 1721 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Usp47Q8BY87 Klkb1-201ENSMUST00000026907 5249 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
Usp47Q8BY87 Gm36640-201ENSMUST00000203686 5934 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Usp47Q8BY87 Zfhx3-204ENSMUST00000220518 17152 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
Usp47Q8BY87 Gm15501-202ENSMUST00000140687 625 ntBASIC8.52□□□□□ -1.05
Usp47Q8BY87 Mir3097-201ENSMUST00000175356 67 ntBASIC8.52□□□□□ -1.05
Usp47Q8BY87 Gm6472-201ENSMUST00000178147 651 ntBASIC8.52□□□□□ -1.05
Usp47Q8BY87 Gm28998-201ENSMUST00000186194 919 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Usp47Q8BY87 Gm28576-201ENSMUST00000189007 919 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Usp47Q8BY87 2610509F24Rik-201ENSMUST00000193035 838 ntBASIC8.52□□□□□ -1.05
Usp47Q8BY87 1700019F05Rik-201ENSMUST00000202487 533 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Usp47Q8BY87 Gm5886-202ENSMUST00000203957 522 ntBASIC8.52□□□□□ -1.05
Usp47Q8BY87 Gm39090-202ENSMUST00000205992 508 ntTSL 5 BASIC8.52□□□□□ -1.05
Usp47Q8BY87 Olfr1084-201ENSMUST00000216851 961 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
Usp47Q8BY87 AC129219.1-201ENSMUST00000224336 448 ntBASIC8.52□□□□□ -1.05
Usp47Q8BY87 Mir194-1-201ENSMUST00000083647 67 ntBASIC8.52□□□□□ -1.05
Usp47Q8BY87 Ranbp17-201ENSMUST00000037522 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Usp47Q8BY87 Myct1-201ENSMUST00000051809 2845 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Usp47Q8BY87 Fcrl5-202ENSMUST00000166297 1527 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.05
Usp47Q8BY87 Gm37106-201ENSMUST00000193760 1532 ntBASIC8.52□□□□□ -1.05
Usp47Q8BY87 Klrb1f-201ENSMUST00000032257 1701 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Usp47Q8BY87 Serpina9-201ENSMUST00000058464 3571 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Usp47Q8BY87 Gm14326-202ENSMUST00000108930 1807 ntAPPRIS P1 TSL 2 BASIC8.52□□□□□ -1.05
Usp47Q8BY87 Gm31218-202ENSMUST00000221428 1823 ntTSL 5 BASIC8.52□□□□□ -1.05
Usp47Q8BY87 Gm38412-201ENSMUST00000199205 3895 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Usp47Q8BY87 Gm18259-201ENSMUST00000220991 2010 ntBASIC8.52□□□□□ -1.05
Usp47Q8BY87 Tnik-215ENSMUST00000162777 3894 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.05
Usp47Q8BY87 Amer1-201ENSMUST00000084535 8496 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Usp47Q8BY87 Gdap10-201ENSMUST00000180613 5003 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Usp47Q8BY87 Itga1-201ENSMUST00000061673 10967 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Usp47Q8BY87 Vmn1r220-202ENSMUST00000226651 6252 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
Usp47Q8BY87 Traj46-201ENSMUST00000103696 63 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
Usp47Q8BY87 Gm14326-201ENSMUST00000108928 767 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Usp47Q8BY87 Nuf2-202ENSMUST00000111368 2405 ntAPPRIS P2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Usp47Q8BY87 Gm14515-201ENSMUST00000121327 216 ntBASIC8.51□□□□□ -1.05
Usp47Q8BY87 Gm23149-201ENSMUST00000158837 230 ntBASIC8.51□□□□□ -1.05
Usp47Q8BY87 Gm25363-201ENSMUST00000158850 245 ntBASIC8.51□□□□□ -1.05
Usp47Q8BY87 Gm17206-201ENSMUST00000168123 577 ntTSL 5 BASIC8.51□□□□□ -1.05
Usp47Q8BY87 Vmn2r-ps4-201ENSMUST00000176989 1015 ntBASIC8.51□□□□□ -1.05
Usp47Q8BY87 Gm26653-201ENSMUST00000181537 1214 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Usp47Q8BY87 Gm28322-201ENSMUST00000185627 1475 ntBASIC8.51□□□□□ -1.05
Usp47Q8BY87 Mlh3-201ENSMUST00000019378 5463 ntAPPRIS P2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Usp47Q8BY87 Spcs2-206ENSMUST00000208465 736 ntTSL 5 BASIC8.51□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms