Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm13455-201ENSMUST00000118767 517 ntBASIC6.48□□□□□ -1.37
Ccdc40Q8BI79 Rpl5-ps2-201ENSMUST00000119057 891 ntBASIC6.48□□□□□ -1.37
Ccdc40Q8BI79 Gm24359-201ENSMUST00000158418 221 ntBASIC6.48□□□□□ -1.37
Ccdc40Q8BI79 Gm3242-201ENSMUST00000171273 485 ntBASIC6.48□□□□□ -1.37
Ccdc40Q8BI79 Gm9658-201ENSMUST00000182757 1012 ntBASIC6.48□□□□□ -1.37
Ccdc40Q8BI79 Olr1-203ENSMUST00000182784 570 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Ccdc40Q8BI79 Gm27160-201ENSMUST00000184837 199 ntBASIC6.48□□□□□ -1.37
Ccdc40Q8BI79 Gm37511-201ENSMUST00000192901 294 ntBASIC6.48□□□□□ -1.37
Ccdc40Q8BI79 Gm2979-201ENSMUST00000193442 463 ntBASIC6.48□□□□□ -1.37
Ccdc40Q8BI79 Gm37477-201ENSMUST00000195215 884 ntBASIC6.48□□□□□ -1.37
Ccdc40Q8BI79 Gm22897-202ENSMUST00000197782 127 ntBASIC6.48□□□□□ -1.37
Ccdc40Q8BI79 Gm43464-201ENSMUST00000198003 317 ntTSL 3 BASIC6.48□□□□□ -1.37
Ccdc40Q8BI79 Gm44225-201ENSMUST00000203582 186 ntBASIC6.48□□□□□ -1.37
Ccdc40Q8BI79 Gm35453-201ENSMUST00000210304 331 ntTSL 3 BASIC6.48□□□□□ -1.37
Ccdc40Q8BI79 AC108401.2-201ENSMUST00000220316 346 ntTSL 3 BASIC6.48□□□□□ -1.37
Ccdc40Q8BI79 AC122371.2-201ENSMUST00000220583 366 ntBASIC6.48□□□□□ -1.37
Ccdc40Q8BI79 Gm7557-201ENSMUST00000221935 865 ntBASIC6.48□□□□□ -1.37
Ccdc40Q8BI79 Gm9267-201ENSMUST00000222831 404 ntBASIC6.48□□□□□ -1.37
Ccdc40Q8BI79 AC132239.1-201ENSMUST00000223157 773 ntTSL 5 BASIC6.48□□□□□ -1.37
Ccdc40Q8BI79 Orm1-201ENSMUST00000030044 775 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Ccdc40Q8BI79 Orm2-201ENSMUST00000075341 775 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Ccdc40Q8BI79 Ceacam13-201ENSMUST00000081703 946 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
Ccdc40Q8BI79 Nlrp4a-202ENSMUST00000119386 3215 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Ccdc40Q8BI79 A830019P07Rik-201ENSMUST00000178904 1777 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Ccdc40Q8BI79 Mgat4a-206ENSMUST00000154819 2796 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Ccdc40Q8BI79 AC137871.4-201ENSMUST00000226323 3901 ntBASIC6.48□□□□□ -1.37
Ccdc40Q8BI79 Vmn1r86-204ENSMUST00000227700 5487 ntAPPRIS ALT2 BASIC6.48□□□□□ -1.37
Ccdc40Q8BI79 4922502D21Rik-201ENSMUST00000051283 1582 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Ccdc40Q8BI79 Slc28a2-201ENSMUST00000028652 3852 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Ccdc40Q8BI79 Zbbx-203ENSMUST00000107776 1978 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
Ccdc40Q8BI79 Wdr17-202ENSMUST00000127511 4668 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
Ccdc40Q8BI79 Gm45413-201ENSMUST00000210389 3538 ntBASIC6.47□□□□□ -1.37
Ccdc40Q8BI79 Cxcl15-201ENSMUST00000031322 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Ccdc40Q8BI79 Gm42697-201ENSMUST00000198992 4092 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Ccdc40Q8BI79 Olfr736-205ENSMUST00000215263 2255 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Ccdc40Q8BI79 Slc17a4-201ENSMUST00000021769 1604 ntAPPRIS P2 TSL 5 BASIC6.47□□□□□ -1.37
Ccdc40Q8BI79 Oxr1-201ENSMUST00000022918 4232 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Ccdc40Q8BI79 Copg2-201ENSMUST00000048774 3961 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Ccdc40Q8BI79 Hmgn3-203ENSMUST00000185315 1391 ntAPPRIS ALT2 TSL 2 BASIC6.47□□□□□ -1.37
Ccdc40Q8BI79 AC140393.3-201ENSMUST00000228396 1352 ntBASIC6.47□□□□□ -1.37
Ccdc40Q8BI79 Gm6125-201ENSMUST00000217983 3472 ntBASIC6.47□□□□□ -1.37
Ccdc40Q8BI79 Dnase1l1-202ENSMUST00000075821 1511 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Ccdc40Q8BI79 AC151971.5-201ENSMUST00000214422 3254 ntBASIC6.47□□□□□ -1.37
Ccdc40Q8BI79 Gabra6-203ENSMUST00000155218 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Ccdc40Q8BI79 Gm9602-201ENSMUST00000163325 2062 ntAPPRIS P5 TSL 1 (best) BASIC6.47□□□□□ -1.37
Ccdc40Q8BI79 Gm8356-201ENSMUST00000163636 2062 ntAPPRIS P5 TSL 5 BASIC6.47□□□□□ -1.37
Ccdc40Q8BI79 Gm9311-201ENSMUST00000118042 1269 ntBASIC6.47□□□□□ -1.37
Ccdc40Q8BI79 Spink8-201ENSMUST00000118732 637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Ccdc40Q8BI79 Gm14563-201ENSMUST00000120571 354 ntBASIC6.47□□□□□ -1.37
Ccdc40Q8BI79 Olfr408-ps1-201ENSMUST00000121710 941 ntBASIC6.47□□□□□ -1.37
Ccdc40Q8BI79 Gm16095-201ENSMUST00000128235 253 ntTSL 5 BASIC6.47□□□□□ -1.37
Ccdc40Q8BI79 Gm11368-201ENSMUST00000139576 609 ntTSL 3 BASIC6.47□□□□□ -1.37
Ccdc40Q8BI79 Gm13485-201ENSMUST00000146690 659 ntTSL 2 BASIC6.47□□□□□ -1.37
Ccdc40Q8BI79 Gm25374-201ENSMUST00000158158 101 ntBASIC6.47□□□□□ -1.37
Ccdc40Q8BI79 Gm4202-201ENSMUST00000169025 733 ntBASIC6.47□□□□□ -1.37
Ccdc40Q8BI79 Gm29093-201ENSMUST00000187366 409 ntTSL 5 BASIC6.47□□□□□ -1.37
Ccdc40Q8BI79 Gm37375-201ENSMUST00000193859 387 ntBASIC6.47□□□□□ -1.37
Ccdc40Q8BI79 Gm37385-201ENSMUST00000195223 387 ntBASIC6.47□□□□□ -1.37
Ccdc40Q8BI79 Csn2-202ENSMUST00000196163 722 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
Ccdc40Q8BI79 AC151967.1-201ENSMUST00000198146 76 ntBASIC6.47□□□□□ -1.37
Ccdc40Q8BI79 Gm43091-201ENSMUST00000198157 423 ntTSL 3 BASIC6.47□□□□□ -1.37
Ccdc40Q8BI79 Gm19104-201ENSMUST00000198392 679 ntBASIC6.47□□□□□ -1.37
Ccdc40Q8BI79 Gm43798-201ENSMUST00000202056 394 ntBASIC6.47□□□□□ -1.37
Ccdc40Q8BI79 Gm21048-201ENSMUST00000202470 1166 ntBASIC6.47□□□□□ -1.37
Ccdc40Q8BI79 Gm44097-201ENSMUST00000204112 563 ntTSL 3 BASIC6.47□□□□□ -1.37
Ccdc40Q8BI79 Gm36696-201ENSMUST00000205418 438 ntTSL 2 BASIC6.47□□□□□ -1.37
Ccdc40Q8BI79 Gm44623-201ENSMUST00000207934 434 ntBASIC6.47□□□□□ -1.37
Ccdc40Q8BI79 AC153729.4-201ENSMUST00000217582 3826 ntBASIC6.47□□□□□ -1.37
Ccdc40Q8BI79 Ppp1r36-204ENSMUST00000220187 504 ntTSL 3 BASIC6.47□□□□□ -1.37
Ccdc40Q8BI79 9530002B09Rik-201ENSMUST00000024032 803 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Ccdc40Q8BI79 Desi2-202ENSMUST00000069568 1193 ntBASIC6.47□□□□□ -1.37
Ccdc40Q8BI79 Olfr644-201ENSMUST00000077417 1071 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Ccdc40Q8BI79 Olfr192-201ENSMUST00000080251 925 ntBASIC6.47□□□□□ -1.37
Ccdc40Q8BI79 Gm10205-201ENSMUST00000087431 234 ntBASIC6.47□□□□□ -1.37
Ccdc40Q8BI79 Cox11-202ENSMUST00000099960 773 ntAPPRIS ALT2 TSL 2 BASIC6.47□□□□□ -1.37
Ccdc40Q8BI79 Arhgef38-202ENSMUST00000147041 6541 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Ccdc40Q8BI79 Gm37769-201ENSMUST00000193753 2369 ntBASIC6.47□□□□□ -1.37
Ccdc40Q8BI79 Gm37725-201ENSMUST00000193965 2125 ntBASIC6.47□□□□□ -1.37
Ccdc40Q8BI79 Sox6-204ENSMUST00000166877 8079 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
Ccdc40Q8BI79 Gm9239-201ENSMUST00000186942 2557 ntBASIC6.47□□□□□ -1.37
Ccdc40Q8BI79 2700049A03Rik-201ENSMUST00000045907 4507 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Ccdc40Q8BI79 Olfr1179-202ENSMUST00000213157 1309 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Ccdc40Q8BI79 AC132465.1-201ENSMUST00000219938 1307 ntBASIC6.47□□□□□ -1.37
Ccdc40Q8BI79 Gm28475-201ENSMUST00000187645 1497 ntTSL 5 BASIC6.47□□□□□ -1.37
Ccdc40Q8BI79 Map2-201ENSMUST00000024639 5195 ntTSL 5 BASIC6.46□□□□□ -1.37
Ccdc40Q8BI79 Adam39-201ENSMUST00000066814 2636 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
Ccdc40Q8BI79 Gm29017-201ENSMUST00000190598 2092 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
Ccdc40Q8BI79 Atr-213ENSMUST00000215311 8102 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
Ccdc40Q8BI79 Pum2-203ENSMUST00000111123 4984 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.37
Ccdc40Q8BI79 Gm45633-201ENSMUST00000210669 3253 ntBASIC6.46□□□□□ -1.37
Ccdc40Q8BI79 Gm13023-201ENSMUST00000085144 1810 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.37
Ccdc40Q8BI79 Olfr491-203ENSMUST00000214605 2136 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.37
Ccdc40Q8BI79 BC018473-204ENSMUST00000156293 4753 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Ccdc40Q8BI79 Platr25-202ENSMUST00000220733 2859 ntAPPRIS P5 TSL 5 BASIC6.46□□□□□ -1.38
Ccdc40Q8BI79 Gm26340-201ENSMUST00000102365 99 ntBASIC6.46□□□□□ -1.38
Ccdc40Q8BI79 Gm22267-201ENSMUST00000104008 131 ntBASIC6.46□□□□□ -1.38
Ccdc40Q8BI79 Gm12169-201ENSMUST00000109228 1065 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Ccdc40Q8BI79 Plscr2-202ENSMUST00000113044 1239 ntTSL 3 BASIC6.46□□□□□ -1.38
Ccdc40Q8BI79 Gm13311-201ENSMUST00000117863 379 ntBASIC6.46□□□□□ -1.38
Ccdc40Q8BI79 4930503H13Rik-201ENSMUST00000118320 725 ntBASIC6.46□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms