Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Scaf4Q6PFF0 Gm23687-201ENSMUST00000178664 79 ntBASIC6.64□□□□□ -1.35
Scaf4Q6PFF0 Gm24566-201ENSMUST00000179286 79 ntBASIC6.64□□□□□ -1.35
Scaf4Q6PFF0 Gm23305-201ENSMUST00000179342 79 ntBASIC6.64□□□□□ -1.35
Scaf4Q6PFF0 Gm26389-201ENSMUST00000179819 79 ntBASIC6.64□□□□□ -1.35
Scaf4Q6PFF0 Gm22130-201ENSMUST00000179979 79 ntBASIC6.64□□□□□ -1.35
Scaf4Q6PFF0 Gm22393-201ENSMUST00000180153 79 ntBASIC6.64□□□□□ -1.35
Scaf4Q6PFF0 Gm25085-201ENSMUST00000180298 79 ntBASIC6.64□□□□□ -1.35
Scaf4Q6PFF0 Platr5-202ENSMUST00000181016 479 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Scaf4Q6PFF0 Gm26528-201ENSMUST00000181965 283 ntBASIC6.64□□□□□ -1.35
Scaf4Q6PFF0 Gm8245-201ENSMUST00000182434 987 ntBASIC6.64□□□□□ -1.35
Scaf4Q6PFF0 Gm18501-201ENSMUST00000185363 664 ntBASIC6.64□□□□□ -1.35
Scaf4Q6PFF0 Oosp1-203ENSMUST00000186557 495 ntAPPRIS ALT2 TSL 2 BASIC6.64□□□□□ -1.35
Scaf4Q6PFF0 Gm37491-201ENSMUST00000192552 1111 ntBASIC6.64□□□□□ -1.35
Scaf4Q6PFF0 Gm38261-201ENSMUST00000192608 316 ntBASIC6.64□□□□□ -1.35
Scaf4Q6PFF0 Trav15d-3-201ENSMUST00000198604 167 ntBASIC6.64□□□□□ -1.35
Scaf4Q6PFF0 Gm43295-201ENSMUST00000201439 412 ntBASIC6.64□□□□□ -1.35
Scaf4Q6PFF0 Gm45122-201ENSMUST00000206376 784 ntBASIC6.64□□□□□ -1.35
Scaf4Q6PFF0 Gm44722-201ENSMUST00000206473 436 ntBASIC6.64□□□□□ -1.35
Scaf4Q6PFF0 Olfr1455-ps1-201ENSMUST00000208608 771 ntBASIC6.64□□□□□ -1.35
Scaf4Q6PFF0 Gm7394-201ENSMUST00000209138 1032 ntBASIC6.64□□□□□ -1.35
Scaf4Q6PFF0 Ccl7-201ENSMUST00000021011 801 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Scaf4Q6PFF0 Gm30808-201ENSMUST00000211166 845 ntTSL 5 BASIC6.64□□□□□ -1.35
Scaf4Q6PFF0 Gm45756-201ENSMUST00000212491 407 ntBASIC6.64□□□□□ -1.35
Scaf4Q6PFF0 Gm2774-201ENSMUST00000213650 1165 ntBASIC6.64□□□□□ -1.35
Scaf4Q6PFF0 Gm29154-253ENSMUST00000217229 1207 ntTSL 5 BASIC6.64□□□□□ -1.35
Scaf4Q6PFF0 Olfr809-203ENSMUST00000218237 1100 ntBASIC6.64□□□□□ -1.35
Scaf4Q6PFF0 AC160112.1-201ENSMUST00000219139 714 ntBASIC6.64□□□□□ -1.35
Scaf4Q6PFF0 Gm46424-201ENSMUST00000221567 168 ntBASIC6.64□□□□□ -1.35
Scaf4Q6PFF0 AC155305.1-201ENSMUST00000222207 319 ntBASIC6.64□□□□□ -1.35
Scaf4Q6PFF0 AC117769.2-201ENSMUST00000224612 469 ntBASIC6.64□□□□□ -1.35
Scaf4Q6PFF0 AC154747.4-201ENSMUST00000224802 903 ntBASIC6.64□□□□□ -1.35
Scaf4Q6PFF0 AC122393.1-201ENSMUST00000226570 319 ntBASIC6.64□□□□□ -1.35
Scaf4Q6PFF0 AC137902.2-201ENSMUST00000227989 576 ntBASIC6.64□□□□□ -1.35
Scaf4Q6PFF0 Tmed11-201ENSMUST00000004943 763 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Scaf4Q6PFF0 Gm5341-201ENSMUST00000058881 489 ntBASIC6.64□□□□□ -1.35
Scaf4Q6PFF0 Olfr809-201ENSMUST00000059891 1100 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Scaf4Q6PFF0 Olfr516-201ENSMUST00000071410 945 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Scaf4Q6PFF0 1700019A02Rik-201ENSMUST00000072235 646 ntAPPRIS P2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Scaf4Q6PFF0 Gm23238-201ENSMUST00000083007 164 ntBASIC6.64□□□□□ -1.35
Scaf4Q6PFF0 Olfr1456-ps1-201ENSMUST00000087769 518 ntBASIC6.64□□□□□ -1.35
Scaf4Q6PFF0 1110057P08Rik-201ENSMUST00000089097 465 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Scaf4Q6PFF0 Olfr1221-201ENSMUST00000099795 936 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Scaf4Q6PFF0 Map2-202ENSMUST00000077355 5125 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Scaf4Q6PFF0 Cfap61-206ENSMUST00000133433 3998 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Scaf4Q6PFF0 Tlr4-201ENSMUST00000048096 4077 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Scaf4Q6PFF0 Zfp345-201ENSMUST00000109914 2734 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Scaf4Q6PFF0 Gm3072-201ENSMUST00000167712 1395 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Scaf4Q6PFF0 Clca4a-201ENSMUST00000029923 3004 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Scaf4Q6PFF0 Spag17os-202ENSMUST00000145279 3219 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Scaf4Q6PFF0 Lrrtm4-201ENSMUST00000074662 3383 ntTSL 2 BASIC6.64□□□□□ -1.35
Scaf4Q6PFF0 Mrpl1-201ENSMUST00000036437 3431 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Scaf4Q6PFF0 Vmn2r44-201ENSMUST00000166499 3660 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Scaf4Q6PFF0 Nsd2-205ENSMUST00000114399 7786 ntTSL 5 BASIC6.64□□□□□ -1.35
Scaf4Q6PFF0 Gm10258-201ENSMUST00000091270 2123 ntBASIC6.64□□□□□ -1.35
Scaf4Q6PFF0 Gm10447-201ENSMUST00000084653 2307 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Scaf4Q6PFF0 Gm26816-201ENSMUST00000180679 2448 ntTSL 5 BASIC6.64□□□□□ -1.35
Scaf4Q6PFF0 Emcn-202ENSMUST00000122064 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Scaf4Q6PFF0 Gria3-202ENSMUST00000115103 3081 ntAPPRIS ALT1 TSL 5 BASIC6.63□□□□□ -1.35
Scaf4Q6PFF0 Gm45601-201ENSMUST00000211483 6753 ntTSL 5 BASIC6.63□□□□□ -1.35
Scaf4Q6PFF0 Lpin2-203ENSMUST00000126681 4167 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Scaf4Q6PFF0 Gm9573-201ENSMUST00000164502 5231 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Scaf4Q6PFF0 Foxp1-206ENSMUST00000113326 7029 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Scaf4Q6PFF0 Gm26079-201ENSMUST00000104066 133 ntBASIC6.63□□□□□ -1.35
Scaf4Q6PFF0 Gm12636-201ENSMUST00000117395 624 ntBASIC6.63□□□□□ -1.35
Scaf4Q6PFF0 Gm15779-201ENSMUST00000117470 412 ntBASIC6.63□□□□□ -1.35
Scaf4Q6PFF0 Rpl27-ps2-201ENSMUST00000120378 399 ntBASIC6.63□□□□□ -1.35
Scaf4Q6PFF0 Gm12819-201ENSMUST00000122223 629 ntBASIC6.63□□□□□ -1.35
Scaf4Q6PFF0 Pramef12os-201ENSMUST00000133334 767 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Scaf4Q6PFF0 Gm13715-201ENSMUST00000136578 411 ntTSL 3 BASIC6.63□□□□□ -1.35
Scaf4Q6PFF0 2610035D17Rik-204ENSMUST00000150712 947 ntTSL 2 BASIC6.63□□□□□ -1.35
Scaf4Q6PFF0 Gm11940-201ENSMUST00000153599 417 ntTSL 3 BASIC6.63□□□□□ -1.35
Scaf4Q6PFF0 Gm12031-201ENSMUST00000156150 627 ntTSL 2 BASIC6.63□□□□□ -1.35
Scaf4Q6PFF0 Tial1-211ENSMUST00000165023 2003 ntAPPRIS ALT1 TSL 5 BASIC6.63□□□□□ -1.35
Scaf4Q6PFF0 Tdrd3-203ENSMUST00000169504 5280 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Scaf4Q6PFF0 Nup205-202ENSMUST00000170234 1120 ntTSL 5 BASIC6.63□□□□□ -1.35
Scaf4Q6PFF0 Gm42936-201ENSMUST00000174019 652 ntTSL 3 BASIC6.63□□□□□ -1.35
Scaf4Q6PFF0 Ctage5-217ENSMUST00000176892 2784 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Scaf4Q6PFF0 Obox4-ps36-201ENSMUST00000177206 723 ntBASIC6.63□□□□□ -1.35
Scaf4Q6PFF0 Obox4-ps16-201ENSMUST00000177624 1137 ntBASIC6.63□□□□□ -1.35
Scaf4Q6PFF0 Obox4-ps17-201ENSMUST00000178341 1137 ntBASIC6.63□□□□□ -1.35
Scaf4Q6PFF0 Obox4-ps18-201ENSMUST00000179441 1137 ntBASIC6.63□□□□□ -1.35
Scaf4Q6PFF0 1500015L24Rik-202ENSMUST00000179640 780 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Scaf4Q6PFF0 Mir6940-201ENSMUST00000183447 70 ntBASIC6.63□□□□□ -1.35
Scaf4Q6PFF0 Gm29377-201ENSMUST00000185892 1161 ntTSL 5 BASIC6.63□□□□□ -1.35
Scaf4Q6PFF0 Gm29633-204ENSMUST00000187737 675 ntTSL 5 BASIC6.63□□□□□ -1.35
Scaf4Q6PFF0 Gm18181-201ENSMUST00000190670 736 ntBASIC6.63□□□□□ -1.35
Scaf4Q6PFF0 Gm37183-201ENSMUST00000191712 3405 ntBASIC6.63□□□□□ -1.35
Scaf4Q6PFF0 Osbpl9-219ENSMUST00000194478 2903 ntTSL 5 BASIC6.63□□□□□ -1.35
Scaf4Q6PFF0 Gm35212-201ENSMUST00000196672 606 ntBASIC6.63□□□□□ -1.35
Scaf4Q6PFF0 Csn2-206ENSMUST00000197422 1329 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
Scaf4Q6PFF0 Igkv12-49-201ENSMUST00000197714 278 ntBASIC6.63□□□□□ -1.35
Scaf4Q6PFF0 Gm43335-201ENSMUST00000198299 3276 ntBASIC6.63□□□□□ -1.35
Scaf4Q6PFF0 Gm43841-201ENSMUST00000199491 586 ntBASIC6.63□□□□□ -1.35
Scaf4Q6PFF0 Gm43343-201ENSMUST00000202454 1926 ntBASIC6.63□□□□□ -1.35
Scaf4Q6PFF0 Gm6261-201ENSMUST00000204707 760 ntBASIC6.63□□□□□ -1.35
Scaf4Q6PFF0 Gm45196-201ENSMUST00000206751 825 ntBASIC6.63□□□□□ -1.35
Scaf4Q6PFF0 6720469O03Rik-201ENSMUST00000206785 1201 ntBASIC6.63□□□□□ -1.35
Scaf4Q6PFF0 Gm45117-201ENSMUST00000207250 1774 ntBASIC6.63□□□□□ -1.35
Scaf4Q6PFF0 Gm44584-201ENSMUST00000208395 2880 ntBASIC6.63□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms