Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 1700003H04Rik-203ENSMUST00000178485 761 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Trim43aQ3TL54 1700010L04Rik-203ENSMUST00000179662 1015 ntTSL 5 BASIC6.47□□□□□ -1.37
Trim43aQ3TL54 Gm8367-201ENSMUST00000186145 887 ntBASIC6.47□□□□□ -1.37
Trim43aQ3TL54 Gm17934-201ENSMUST00000192818 422 ntBASIC6.47□□□□□ -1.37
Trim43aQ3TL54 Gm42865-201ENSMUST00000197981 613 ntTSL 3 BASIC6.47□□□□□ -1.37
Trim43aQ3TL54 Gm45008-201ENSMUST00000206420 493 ntBASIC6.47□□□□□ -1.37
Trim43aQ3TL54 Gm45607-201ENSMUST00000211143 678 ntTSL 3 BASIC6.47□□□□□ -1.37
Trim43aQ3TL54 Gm45602-202ENSMUST00000211703 1036 ntTSL 5 BASIC6.47□□□□□ -1.37
Trim43aQ3TL54 AC124601.1-201ENSMUST00000220531 135 ntBASIC6.47□□□□□ -1.37
Trim43aQ3TL54 Gm7240-202ENSMUST00000221961 353 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Trim43aQ3TL54 CT030645.3-201ENSMUST00000225483 1022 ntBASIC6.47□□□□□ -1.37
Trim43aQ3TL54 AC154527.1-201ENSMUST00000225809 242 ntBASIC6.47□□□□□ -1.37
Trim43aQ3TL54 Ear14-202ENSMUST00000228064 948 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Trim43aQ3TL54 Ninj2-201ENSMUST00000035244 823 ntAPPRIS ALT2 TSL 2 BASIC6.47□□□□□ -1.37
Trim43aQ3TL54 Gm22581-201ENSMUST00000083735 136 ntBASIC6.47□□□□□ -1.37
Trim43aQ3TL54 Gm5594-201ENSMUST00000172712 1429 ntBASIC6.47□□□□□ -1.37
Trim43aQ3TL54 Vmn2r14-201ENSMUST00000170341 2547 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Trim43aQ3TL54 Scn2a-202ENSMUST00000100067 8690 ntAPPRIS P3 TSL 5 BASIC6.47□□□□□ -1.37
Trim43aQ3TL54 2900018N21Rik-201ENSMUST00000195805 1580 ntBASIC6.47□□□□□ -1.37
Trim43aQ3TL54 Rag2-202ENSMUST00000111227 1857 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Trim43aQ3TL54 Sirpb1c-201ENSMUST00000050623 1499 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Trim43aQ3TL54 Sis-201ENSMUST00000094190 5887 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
Trim43aQ3TL54 Olfr419-202ENSMUST00000214725 2685 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
Trim43aQ3TL54 Gm3278-201ENSMUST00000164459 1500 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
Trim43aQ3TL54 CT025604.1-201ENSMUST00000221111 3436 ntBASIC6.46□□□□□ -1.37
Trim43aQ3TL54 Pter-203ENSMUST00000134794 3571 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
Trim43aQ3TL54 Olfr1295-203ENSMUST00000217772 5539 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Trim43aQ3TL54 Dock10-201ENSMUST00000077946 7198 ntAPPRIS P3 TSL 5 BASIC6.46□□□□□ -1.38
Trim43aQ3TL54 Hdac9-201ENSMUST00000110819 4413 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Trim43aQ3TL54 Gm13626-201ENSMUST00000119435 402 ntBASIC6.46□□□□□ -1.38
Trim43aQ3TL54 Arsk-201ENSMUST00000120573 3657 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Trim43aQ3TL54 Olfr360-201ENSMUST00000120704 954 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Trim43aQ3TL54 Gm12451-201ENSMUST00000121636 633 ntBASIC6.46□□□□□ -1.38
Trim43aQ3TL54 Gm13669-201ENSMUST00000122366 457 ntBASIC6.46□□□□□ -1.38
Trim43aQ3TL54 Gm11184-201ENSMUST00000126437 268 ntTSL 3 BASIC6.46□□□□□ -1.38
Trim43aQ3TL54 Hmgb4os-201ENSMUST00000131581 518 ntTSL 5 BASIC6.46□□□□□ -1.38
Trim43aQ3TL54 Gm12119-201ENSMUST00000136083 700 ntTSL 3 BASIC6.46□□□□□ -1.38
Trim43aQ3TL54 Tnfsf13os-201ENSMUST00000140371 816 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Trim43aQ3TL54 Gm13166-203ENSMUST00000144166 326 ntTSL 3 BASIC6.46□□□□□ -1.38
Trim43aQ3TL54 Gm15478-201ENSMUST00000145914 2172 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Trim43aQ3TL54 Mir1953-201ENSMUST00000157866 89 ntBASIC6.46□□□□□ -1.38
Trim43aQ3TL54 Gm16231-201ENSMUST00000160432 319 ntTSL 3 BASIC6.46□□□□□ -1.38
Trim43aQ3TL54 Gm8922-201ENSMUST00000170057 1167 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Trim43aQ3TL54 Gm6803-201ENSMUST00000178301 435 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Trim43aQ3TL54 Gm2075-201ENSMUST00000180285 435 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Trim43aQ3TL54 Gm26607-201ENSMUST00000180661 867 ntBASIC6.46□□□□□ -1.38
Trim43aQ3TL54 Olfr1252-201ENSMUST00000186710 1099 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Trim43aQ3TL54 Gm29663-201ENSMUST00000186962 853 ntBASIC6.46□□□□□ -1.38
Trim43aQ3TL54 4930526M16Rik-201ENSMUST00000197305 954 ntBASIC6.46□□□□□ -1.38
Trim43aQ3TL54 Gm42607-201ENSMUST00000200221 3393 ntBASIC6.46□□□□□ -1.38
Trim43aQ3TL54 Gm5306-201ENSMUST00000203325 757 ntBASIC6.46□□□□□ -1.38
Trim43aQ3TL54 4833403J16Rik-201ENSMUST00000204490 1031 ntBASIC6.46□□□□□ -1.38
Trim43aQ3TL54 Gm44707-201ENSMUST00000206293 1216 ntTSL 5 BASIC6.46□□□□□ -1.38
Trim43aQ3TL54 Smarca2-231ENSMUST00000208091 1140 ntTSL 5 BASIC6.46□□□□□ -1.38
Trim43aQ3TL54 Gm2022-201ENSMUST00000220585 435 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Trim43aQ3TL54 Gm8607-201ENSMUST00000221864 431 ntBASIC6.46□□□□□ -1.38
Trim43aQ3TL54 AC174082.2-201ENSMUST00000222094 543 ntBASIC6.46□□□□□ -1.38
Trim43aQ3TL54 AC133283.1-201ENSMUST00000228443 859 ntBASIC6.46□□□□□ -1.38
Trim43aQ3TL54 Dmxl1-201ENSMUST00000041772 12247 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
Trim43aQ3TL54 4930515G13Rik-201ENSMUST00000057521 492 ntBASIC6.46□□□□□ -1.38
Trim43aQ3TL54 Gm8444-201ENSMUST00000092020 357 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Trim43aQ3TL54 Mup8-201ENSMUST00000095058 925 ntAPPRIS ALT2 TSL 2 BASIC6.46□□□□□ -1.38
Trim43aQ3TL54 Olfr652-201ENSMUST00000098175 1061 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Trim43aQ3TL54 4930525G20Rik-201ENSMUST00000181912 2987 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Trim43aQ3TL54 Hrh2-202ENSMUST00000209846 4074 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
Trim43aQ3TL54 Htr2a-201ENSMUST00000036653 5606 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Trim43aQ3TL54 Gm37087-201ENSMUST00000192966 3309 ntBASIC6.46□□□□□ -1.38
Trim43aQ3TL54 Gm37752-201ENSMUST00000193494 3309 ntBASIC6.46□□□□□ -1.38
Trim43aQ3TL54 AC160966.1-202ENSMUST00000216860 1318 ntTSL 5 BASIC6.46□□□□□ -1.38
Trim43aQ3TL54 Tom1l1-202ENSMUST00000107867 2439 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Trim43aQ3TL54 Olfr1275-202ENSMUST00000216421 2418 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Trim43aQ3TL54 Utp14b-ps1-201ENSMUST00000197716 2265 ntBASIC6.46□□□□□ -1.38
Trim43aQ3TL54 C530043A13Rik-203ENSMUST00000189247 3364 ntBASIC6.46□□□□□ -1.38
Trim43aQ3TL54 Spata1-206ENSMUST00000197980 1807 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Trim43aQ3TL54 Gm45493-201ENSMUST00000209494 3948 ntBASIC6.45□□□□□ -1.38
Trim43aQ3TL54 Olfr1247-202ENSMUST00000111532 6070 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Trim43aQ3TL54 Brinp3-201ENSMUST00000074622 4023 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Trim43aQ3TL54 Mnd1-ps-202ENSMUST00000224435 2574 ntBASIC6.45□□□□□ -1.38
Trim43aQ3TL54 Olfr1285-202ENSMUST00000220153 1430 ntTSL 5 BASIC6.45□□□□□ -1.38
Trim43aQ3TL54 Olfr1299-202ENSMUST00000213511 1783 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Trim43aQ3TL54 Gm36099-201ENSMUST00000221946 1798 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Trim43aQ3TL54 Baz2b-202ENSMUST00000112550 7895 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Trim43aQ3TL54 Defb45-201ENSMUST00000109834 385 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Trim43aQ3TL54 Rps12-ps16-201ENSMUST00000118529 399 ntBASIC6.45□□□□□ -1.38
Trim43aQ3TL54 Rpl5-ps2-201ENSMUST00000119057 891 ntBASIC6.45□□□□□ -1.38
Trim43aQ3TL54 Gm15786-201ENSMUST00000121079 450 ntBASIC6.45□□□□□ -1.38
Trim43aQ3TL54 Gm12827-201ENSMUST00000132690 660 ntTSL 3 BASIC6.45□□□□□ -1.38
Trim43aQ3TL54 Gm12963-203ENSMUST00000156271 388 ntTSL 5 BASIC6.45□□□□□ -1.38
Trim43aQ3TL54 Mir1945-201ENSMUST00000157919 78 ntBASIC6.45□□□□□ -1.38
Trim43aQ3TL54 Speer1-201ENSMUST00000172106 1123 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Trim43aQ3TL54 Mir5617-201ENSMUST00000176786 57 ntBASIC6.45□□□□□ -1.38
Trim43aQ3TL54 Rps12-ps13-201ENSMUST00000178365 399 ntBASIC6.45□□□□□ -1.38
Trim43aQ3TL54 Rps12-ps11-201ENSMUST00000178427 399 ntBASIC6.45□□□□□ -1.38
Trim43aQ3TL54 Rps12-ps12-201ENSMUST00000179020 399 ntBASIC6.45□□□□□ -1.38
Trim43aQ3TL54 Rps12-ps17-201ENSMUST00000179067 399 ntBASIC6.45□□□□□ -1.38
Trim43aQ3TL54 Rps12-ps6-201ENSMUST00000179239 399 ntBASIC6.45□□□□□ -1.38
Trim43aQ3TL54 Rps12-ps14-201ENSMUST00000179356 399 ntBASIC6.45□□□□□ -1.38
Trim43aQ3TL54 Rps12-ps18-201ENSMUST00000179420 399 ntBASIC6.45□□□□□ -1.38
Trim43aQ3TL54 Rps12-ps15-201ENSMUST00000179567 399 ntBASIC6.45□□□□□ -1.38
Trim43aQ3TL54 Rps12l1-201ENSMUST00000183090 399 ntBASIC6.45□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 77.7 ms