Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 Gm18705-201ENSMUST00000215985 913 ntBASIC6.32□□□□□ -1.4
Usp39Q3TIX9 Gm40797-201ENSMUST00000219762 385 ntTSL 2 BASIC6.32□□□□□ -1.4
Usp39Q3TIX9 CT030175.1-201ENSMUST00000220822 408 ntBASIC6.32□□□□□ -1.4
Usp39Q3TIX9 AC122840.3-201ENSMUST00000221474 486 ntTSL 5 BASIC6.32□□□□□ -1.4
Usp39Q3TIX9 Aoah-202ENSMUST00000221982 919 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Usp39Q3TIX9 AC174082.2-201ENSMUST00000222094 543 ntBASIC6.32□□□□□ -1.4
Usp39Q3TIX9 AC144733.1-201ENSMUST00000222893 1289 ntBASIC6.32□□□□□ -1.4
Usp39Q3TIX9 CT009711.2-201ENSMUST00000225352 934 ntBASIC6.32□□□□□ -1.4
Usp39Q3TIX9 AC108945.1-201ENSMUST00000226477 94 ntBASIC6.32□□□□□ -1.4
Usp39Q3TIX9 AC159267.1-201ENSMUST00000226702 678 ntBASIC6.32□□□□□ -1.4
Usp39Q3TIX9 Vmn1r38-203ENSMUST00000227694 909 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Usp39Q3TIX9 2010106E10Rik-201ENSMUST00000026602 1257 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Usp39Q3TIX9 Vmn1r74-201ENSMUST00000050416 915 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Usp39Q3TIX9 Olfr177-201ENSMUST00000072853 930 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Usp39Q3TIX9 Gm14851-201ENSMUST00000077452 351 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Usp39Q3TIX9 n-R5s36-201ENSMUST00000082998 119 ntBASIC6.32□□□□□ -1.4
Usp39Q3TIX9 Gm23448-201ENSMUST00000083151 104 ntBASIC6.32□□□□□ -1.4
Usp39Q3TIX9 Taar4-201ENSMUST00000092660 1044 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Usp39Q3TIX9 Xcr1-201ENSMUST00000182350 4453 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Usp39Q3TIX9 Plb1-201ENSMUST00000101376 4699 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Usp39Q3TIX9 Gm29021-201ENSMUST00000185451 1498 ntTSL 5 BASIC6.32□□□□□ -1.4
Usp39Q3TIX9 Gm29071-201ENSMUST00000185729 1488 ntTSL 5 BASIC6.32□□□□□ -1.4
Usp39Q3TIX9 Gm28799-201ENSMUST00000186506 1498 ntTSL 5 BASIC6.32□□□□□ -1.4
Usp39Q3TIX9 Gm28663-201ENSMUST00000186567 1498 ntTSL 5 BASIC6.32□□□□□ -1.4
Usp39Q3TIX9 Gm28470-201ENSMUST00000186912 1498 ntTSL 5 BASIC6.32□□□□□ -1.4
Usp39Q3TIX9 Gm28971-201ENSMUST00000187506 1498 ntTSL 5 BASIC6.32□□□□□ -1.4
Usp39Q3TIX9 Gm28733-202ENSMUST00000187597 1498 ntTSL 5 BASIC6.32□□□□□ -1.4
Usp39Q3TIX9 Gm28820-201ENSMUST00000188530 1498 ntTSL 5 BASIC6.32□□□□□ -1.4
Usp39Q3TIX9 Gm29606-202ENSMUST00000188564 1498 ntTSL 5 BASIC6.32□□□□□ -1.4
Usp39Q3TIX9 Gm29225-202ENSMUST00000188647 1498 ntTSL 5 BASIC6.32□□□□□ -1.4
Usp39Q3TIX9 Gm28152-201ENSMUST00000188694 1498 ntTSL 5 BASIC6.32□□□□□ -1.4
Usp39Q3TIX9 Gm28771-202ENSMUST00000189399 1499 ntTSL 5 BASIC6.32□□□□□ -1.4
Usp39Q3TIX9 Gm28741-201ENSMUST00000189417 1498 ntTSL 5 BASIC6.32□□□□□ -1.4
Usp39Q3TIX9 Gm28540-202ENSMUST00000189573 1498 ntTSL 5 BASIC6.32□□□□□ -1.4
Usp39Q3TIX9 Gm29122-203ENSMUST00000189609 1498 ntTSL 5 BASIC6.32□□□□□ -1.4
Usp39Q3TIX9 Gm28613-201ENSMUST00000189627 1498 ntTSL 5 BASIC6.32□□□□□ -1.4
Usp39Q3TIX9 Gm28816-202ENSMUST00000189686 1498 ntTSL 5 BASIC6.32□□□□□ -1.4
Usp39Q3TIX9 Gm29584-202ENSMUST00000190181 1498 ntTSL 5 BASIC6.32□□□□□ -1.4
Usp39Q3TIX9 Gm28293-202ENSMUST00000190417 1498 ntTSL 5 BASIC6.32□□□□□ -1.4
Usp39Q3TIX9 Gm28463-203ENSMUST00000191085 1498 ntTSL 5 BASIC6.32□□□□□ -1.4
Usp39Q3TIX9 Gm28124-202ENSMUST00000191099 1498 ntTSL 5 BASIC6.32□□□□□ -1.4
Usp39Q3TIX9 Gm29217-202ENSMUST00000191270 1498 ntTSL 5 BASIC6.32□□□□□ -1.4
Usp39Q3TIX9 Gm28332-203ENSMUST00000191389 1498 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Usp39Q3TIX9 Gm37346-201ENSMUST00000191665 1498 ntTSL 5 BASIC6.32□□□□□ -1.4
Usp39Q3TIX9 Gm37454-202ENSMUST00000193918 1498 ntTSL 5 BASIC6.32□□□□□ -1.4
Usp39Q3TIX9 Gm38371-202ENSMUST00000193996 1498 ntTSL 5 BASIC6.32□□□□□ -1.4
Usp39Q3TIX9 Gm37434-203ENSMUST00000194239 1498 ntTSL 5 BASIC6.32□□□□□ -1.4
Usp39Q3TIX9 Gm37840-202ENSMUST00000194805 1498 ntTSL 5 BASIC6.32□□□□□ -1.4
Usp39Q3TIX9 Gm9874-202ENSMUST00000194957 1464 ntBASIC6.32□□□□□ -1.4
Usp39Q3TIX9 Gm37687-203ENSMUST00000195020 1498 ntTSL 5 BASIC6.32□□□□□ -1.4
Usp39Q3TIX9 Gm37071-203ENSMUST00000195814 1498 ntTSL 5 BASIC6.32□□□□□ -1.4
Usp39Q3TIX9 Heph-203ENSMUST00000113838 4611 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Usp39Q3TIX9 Vmn1r181-204ENSMUST00000227637 4587 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Usp39Q3TIX9 Gm4513-201ENSMUST00000207881 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Usp39Q3TIX9 Gm4565-201ENSMUST00000208134 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Usp39Q3TIX9 Nlrc4-201ENSMUST00000052124 3838 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Usp39Q3TIX9 Gm15448-202ENSMUST00000108619 2097 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
Usp39Q3TIX9 AC120347.1-201ENSMUST00000223326 1639 ntBASIC6.32□□□□□ -1.4
Usp39Q3TIX9 Gm14245-201ENSMUST00000118939 1843 ntBASIC6.32□□□□□ -1.4
Usp39Q3TIX9 Gm44046-201ENSMUST00000203145 2678 ntBASIC6.32□□□□□ -1.4
Usp39Q3TIX9 Fundc2-201ENSMUST00000033541 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Usp39Q3TIX9 Olfr976-204ENSMUST00000217630 2952 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
Usp39Q3TIX9 Zfp790-202ENSMUST00000178162 3356 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Usp39Q3TIX9 Csn2-206ENSMUST00000197422 1329 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
Usp39Q3TIX9 4933403O08Rik-202ENSMUST00000152343 1520 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Usp39Q3TIX9 Rbmy-201ENSMUST00000100360 1708 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Usp39Q3TIX9 Gm10256-202ENSMUST00000188114 1708 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Usp39Q3TIX9 Gm21708-203ENSMUST00000190283 1708 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Usp39Q3TIX9 Ckap5-203ENSMUST00000111337 6384 ntTSL 5 BASIC6.31□□□□□ -1.4
Usp39Q3TIX9 Tpk1-203ENSMUST00000114644 2148 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Usp39Q3TIX9 Gm8822-201ENSMUST00000118948 2347 ntBASIC6.31□□□□□ -1.4
Usp39Q3TIX9 Cyld-206ENSMUST00000209559 4476 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
Usp39Q3TIX9 B3gnt5-201ENSMUST00000079780 4258 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Usp39Q3TIX9 Gm43425-201ENSMUST00000201793 3291 ntBASIC6.31□□□□□ -1.4
Usp39Q3TIX9 Gm43189-201ENSMUST00000196040 3069 ntBASIC6.31□□□□□ -1.4
Usp39Q3TIX9 Pramel7-201ENSMUST00000026957 1861 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Usp39Q3TIX9 Ctps2-202ENSMUST00000101095 1665 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Usp39Q3TIX9 Gm29398-201ENSMUST00000186355 1491 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Usp39Q3TIX9 Tcrg-V6-201ENSMUST00000103555 403 ntAPPRIS ALT2 BASIC6.31□□□□□ -1.4
Usp39Q3TIX9 Gm2178-201ENSMUST00000104927 357 ntBASIC6.31□□□□□ -1.4
Usp39Q3TIX9 Gm13731-201ENSMUST00000117332 196 ntBASIC6.31□□□□□ -1.4
Usp39Q3TIX9 Gm5754-201ENSMUST00000118774 892 ntBASIC6.31□□□□□ -1.4
Usp39Q3TIX9 Apc-ps1-201ENSMUST00000119356 470 ntBASIC6.31□□□□□ -1.4
Usp39Q3TIX9 Rps19-ps14-201ENSMUST00000121832 269 ntBASIC6.31□□□□□ -1.4
Usp39Q3TIX9 Gm14847-201ENSMUST00000121978 519 ntBASIC6.31□□□□□ -1.4
Usp39Q3TIX9 Sycp3-203ENSMUST00000125612 1169 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Usp39Q3TIX9 Gm14092-201ENSMUST00000136794 617 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Usp39Q3TIX9 Gm13485-201ENSMUST00000146690 659 ntTSL 2 BASIC6.31□□□□□ -1.4
Usp39Q3TIX9 Gm2966-201ENSMUST00000166052 481 ntBASIC6.31□□□□□ -1.4
Usp39Q3TIX9 Gm17204-201ENSMUST00000167936 478 ntBASIC6.31□□□□□ -1.4
Usp39Q3TIX9 Gm23810-201ENSMUST00000175150 74 ntBASIC6.31□□□□□ -1.4
Usp39Q3TIX9 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC6.31□□□□□ -1.4
Usp39Q3TIX9 Vmn1r14-201ENSMUST00000177435 912 ntAPPRIS P2 BASIC6.31□□□□□ -1.4
Usp39Q3TIX9 B230110C06Rik-202ENSMUST00000181936 938 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Usp39Q3TIX9 Gm27602-201ENSMUST00000183861 111 ntBASIC6.31□□□□□ -1.4
Usp39Q3TIX9 1700003P14Rik-201ENSMUST00000185602 1078 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Usp39Q3TIX9 Gm8506-201ENSMUST00000186661 829 ntBASIC6.31□□□□□ -1.4
Usp39Q3TIX9 Gm7804-202ENSMUST00000194187 854 ntBASIC6.31□□□□□ -1.4
Usp39Q3TIX9 Gm38343-201ENSMUST00000195786 1060 ntTSL 5 BASIC6.31□□□□□ -1.4
Usp39Q3TIX9 Gm43629-201ENSMUST00000201782 704 ntBASIC6.31□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms