Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Gm44494-201ENSMUST00000196760 129 ntBASIC4.03□□□□□ -1.76
PrkdcP97313 Gm43973-201ENSMUST00000203562 210 ntBASIC4.03□□□□□ -1.76
PrkdcP97313 CAAA01216754.4-202ENSMUST00000215276 610 ntBASIC4.03□□□□□ -1.76
PrkdcP97313 CAAA01216754.4-203ENSMUST00000217178 1097 ntTSL 5 BASIC4.03□□□□□ -1.76
PrkdcP97313 Olfr1537-201ENSMUST00000073248 945 ntAPPRIS P2 BASIC4.03□□□□□ -1.76
PrkdcP97313 Gm23972-201ENSMUST00000083322 165 ntBASIC4.03□□□□□ -1.76
PrkdcP97313 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
PrkdcP97313 Arhgap12-202ENSMUST00000077128 4431 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
PrkdcP97313 Gm37551-201ENSMUST00000195556 2861 ntBASIC4.03□□□□□ -1.76
PrkdcP97313 Psg27-201ENSMUST00000094794 1942 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PrkdcP97313 Gm17654-201ENSMUST00000166110 1403 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
PrkdcP97313 Mylk4-201ENSMUST00000057428 5571 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
PrkdcP97313 Gm10062-201ENSMUST00000072180 1470 ntBASIC4.03□□□□□ -1.76
PrkdcP97313 Gm2245-201ENSMUST00000160698 3376 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PrkdcP97313 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PrkdcP97313 Gm37101-201ENSMUST00000191656 3660 ntBASIC4.03□□□□□ -1.76
PrkdcP97313 Dusp3-202ENSMUST00000107172 4445 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.77
PrkdcP97313 Col4a4-201ENSMUST00000087050 10108 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PrkdcP97313 Zfp455-202ENSMUST00000120861 2712 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
PrkdcP97313 Cse1l-210ENSMUST00000168599 2748 ntTSL 5 BASIC4.02□□□□□ -1.77
PrkdcP97313 Ggta1-203ENSMUST00000102794 3606 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
PrkdcP97313 Smco3-201ENSMUST00000068293 2056 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PrkdcP97313 Olfr590-ps1-201ENSMUST00000118801 898 ntBASIC4.02□□□□□ -1.77
PrkdcP97313 Vmn1r-ps99-201ENSMUST00000120067 766 ntBASIC4.02□□□□□ -1.77
PrkdcP97313 Gm22204-201ENSMUST00000122654 327 ntBASIC4.02□□□□□ -1.77
PrkdcP97313 Has2os-203ENSMUST00000165880 638 ntTSL 2 BASIC4.02□□□□□ -1.77
PrkdcP97313 Gm23631-201ENSMUST00000175291 123 ntBASIC4.02□□□□□ -1.77
PrkdcP97313 Gm26763-201ENSMUST00000180968 1093 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PrkdcP97313 Mir3473f-201ENSMUST00000183743 136 ntBASIC4.02□□□□□ -1.77
PrkdcP97313 Gm28153-201ENSMUST00000189853 629 ntTSL 3 BASIC4.02□□□□□ -1.77
PrkdcP97313 Axdnd1-210ENSMUST00000212747 1238 ntTSL 5 BASIC4.02□□□□□ -1.77
PrkdcP97313 AC154472.2-201ENSMUST00000221186 288 ntTSL 5 BASIC4.02□□□□□ -1.77
PrkdcP97313 AC125543.1-201ENSMUST00000222778 101 ntBASIC4.02□□□□□ -1.77
PrkdcP97313 Prl3b1-201ENSMUST00000035273 879 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PrkdcP97313 Rslcan18-201ENSMUST00000091526 2981 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
PrkdcP97313 Gm6093-202ENSMUST00000222963 2163 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PrkdcP97313 AC134860.3-201ENSMUST00000223564 1300 ntBASIC4.02□□□□□ -1.77
PrkdcP97313 Gm43981-201ENSMUST00000203285 1467 ntBASIC4.02□□□□□ -1.77
PrkdcP97313 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PrkdcP97313 Myo18a-223ENSMUST00000169105 6475 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
PrkdcP97313 Nmnat2-201ENSMUST00000043313 4626 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PrkdcP97313 Gm11516-201ENSMUST00000118450 1582 ntBASIC4.02□□□□□ -1.77
PrkdcP97313 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PrkdcP97313 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
PrkdcP97313 Rtel1-201ENSMUST00000048608 4135 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
PrkdcP97313 Gm15228-201ENSMUST00000142044 3440 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PrkdcP97313 Trpm1-201ENSMUST00000085222 5711 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
PrkdcP97313 Arhgap12-208ENSMUST00000182213 4162 ntAPPRIS ALT1 TSL 5 BASIC4.02□□□□□ -1.77
PrkdcP97313 Slc6a2-201ENSMUST00000072939 6187 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PrkdcP97313 Tmc5-201ENSMUST00000057320 2926 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
PrkdcP97313 Igkv4-92-201ENSMUST00000103332 351 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
PrkdcP97313 Rps15a-201ENSMUST00000106588 640 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
PrkdcP97313 Serpinb1-ps1-201ENSMUST00000118548 586 ntBASIC4.02□□□□□ -1.77
PrkdcP97313 Gm4234-201ENSMUST00000119747 714 ntBASIC4.02□□□□□ -1.77
PrkdcP97313 Gm12519-201ENSMUST00000134099 693 ntTSL 5 BASIC4.02□□□□□ -1.77
PrkdcP97313 Gm24905-201ENSMUST00000158129 104 ntBASIC4.02□□□□□ -1.77
PrkdcP97313 Gm43744-201ENSMUST00000196387 688 ntBASIC4.02□□□□□ -1.77
PrkdcP97313 Gm43408-201ENSMUST00000198263 440 ntBASIC4.02□□□□□ -1.77
PrkdcP97313 Vmn2r-ps92-201ENSMUST00000220242 388 ntBASIC4.02□□□□□ -1.77
PrkdcP97313 Rnase12-202ENSMUST00000227764 673 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
PrkdcP97313 Olfr749-201ENSMUST00000074674 1016 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
PrkdcP97313 Rnase12-201ENSMUST00000089798 545 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
PrkdcP97313 Gm30931-202ENSMUST00000211698 1320 ntTSL 3 BASIC4.02□□□□□ -1.77
PrkdcP97313 Odam-202ENSMUST00000129757 1370 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
PrkdcP97313 AC155255.1-201ENSMUST00000218751 1428 ntTSL 5 BASIC4.02□□□□□ -1.77
PrkdcP97313 Gm21693-202ENSMUST00000186047 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PrkdcP97313 Gm3376-202ENSMUST00000186140 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PrkdcP97313 Gm21704-202ENSMUST00000187277 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PrkdcP97313 Gm10352-202ENSMUST00000187842 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PrkdcP97313 Gm21677-202ENSMUST00000189592 1576 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
PrkdcP97313 Gm44271-201ENSMUST00000204525 2600 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PrkdcP97313 Ttk-202ENSMUST00000185913 2731 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PrkdcP97313 Serpinb8-201ENSMUST00000000514 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PrkdcP97313 AC165080.3-201ENSMUST00000217162 3116 ntBASIC4.02□□□□□ -1.77
PrkdcP97313 Arsk-201ENSMUST00000120573 3657 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PrkdcP97313 Wdr17-209ENSMUST00000150488 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
PrkdcP97313 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC4.02□□□□□ -1.77
PrkdcP97313 Plagl2-202ENSMUST00000109795 5571 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PrkdcP97313 Zmynd11-205ENSMUST00000110636 4117 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PrkdcP97313 Olfr1505-203ENSMUST00000216835 3685 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
PrkdcP97313 A330015K06Rik-202ENSMUST00000195685 2196 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PrkdcP97313 Ank3-247ENSMUST00000218680 5500 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
PrkdcP97313 Aspa-206ENSMUST00000184572 1746 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
PrkdcP97313 Scn2b-201ENSMUST00000093855 3958 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
PrkdcP97313 Gm6427-201ENSMUST00000118721 979 ntBASIC4.02□□□□□ -1.77
PrkdcP97313 Gm15660-201ENSMUST00000118997 478 ntBASIC4.02□□□□□ -1.77
PrkdcP97313 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC4.02□□□□□ -1.77
PrkdcP97313 Gm44776-201ENSMUST00000207212 381 ntBASIC4.02□□□□□ -1.77
PrkdcP97313 Gm8290-201ENSMUST00000218202 477 ntBASIC4.02□□□□□ -1.77
PrkdcP97313 CT025667.1-201ENSMUST00000225872 382 ntBASIC4.02□□□□□ -1.77
PrkdcP97313 Olfr1431-201ENSMUST00000072316 939 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
PrkdcP97313 Fasn-205ENSMUST00000206589 8333 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
PrkdcP97313 Zfp92-201ENSMUST00000033740 5767 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PrkdcP97313 Gm43490-201ENSMUST00000197593 2652 ntBASIC4.02□□□□□ -1.77
PrkdcP97313 AC159264.1-201ENSMUST00000224844 4257 ntBASIC4.02□□□□□ -1.77
PrkdcP97313 Gm13083-201ENSMUST00000105773 2464 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
PrkdcP97313 Pde10a-204ENSMUST00000115715 2783 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
PrkdcP97313 Hbp1-201ENSMUST00000167458 2733 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PrkdcP97313 Tshr-204ENSMUST00000221216 1638 ntTSL 5 BASIC4.02□□□□□ -1.77
PrkdcP97313 Ipo7-201ENSMUST00000084731 4763 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 74.5 ms