Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Pcdh9-202ENSMUST00000192221 5161 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
H3f3aP84244 Gm17690-201ENSMUST00000180958 3467 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
H3f3aP84244 Brinp3-201ENSMUST00000074622 4023 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
H3f3aP84244 Gm9521-201ENSMUST00000206656 1516 ntBASIC5.45□□□□□ -1.54
H3f3aP84244 Xpo7-203ENSMUST00000226448 3663 ntBASIC5.45□□□□□ -1.54
H3f3aP84244 Pgbd1-201ENSMUST00000099719 3283 ntAPPRIS P4 TSL 1 (best) BASIC5.45□□□□□ -1.54
H3f3aP84244 E330013P04Rik-201ENSMUST00000065383 2070 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
H3f3aP84244 Ighv1-64-201ENSMUST00000103535 405 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
H3f3aP84244 Tfpi-207ENSMUST00000111722 1232 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
H3f3aP84244 Gm22952-201ENSMUST00000116720 120 ntBASIC5.45□□□□□ -1.54
H3f3aP84244 Gm14382-201ENSMUST00000117374 437 ntBASIC5.45□□□□□ -1.54
H3f3aP84244 Gm15048-201ENSMUST00000118201 954 ntBASIC5.45□□□□□ -1.54
H3f3aP84244 Rpl21-ps9-201ENSMUST00000119897 482 ntBASIC5.45□□□□□ -1.54
H3f3aP84244 Gm12140-201ENSMUST00000121214 544 ntBASIC5.45□□□□□ -1.54
H3f3aP84244 Gm15618-201ENSMUST00000121610 452 ntBASIC5.45□□□□□ -1.54
H3f3aP84244 Gm12610-201ENSMUST00000139272 581 ntTSL 3 BASIC5.45□□□□□ -1.54
H3f3aP84244 Klra5-201ENSMUST00000014683 1147 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
H3f3aP84244 1700057H21Rik-201ENSMUST00000152467 383 ntTSL 5 BASIC5.45□□□□□ -1.54
H3f3aP84244 Pdzph1-203ENSMUST00000177360 950 ntTSL 5 BASIC5.45□□□□□ -1.54
H3f3aP84244 Sbp-205ENSMUST00000183017 700 ntTSL 5 BASIC5.45□□□□□ -1.54
H3f3aP84244 Scgb1b4-ps-201ENSMUST00000186920 271 ntBASIC5.45□□□□□ -1.54
H3f3aP84244 Gm28493-201ENSMUST00000188427 604 ntTSL 5 BASIC5.45□□□□□ -1.54
H3f3aP84244 1700108F19Rik-206ENSMUST00000191266 857 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
H3f3aP84244 Gm43132-201ENSMUST00000199106 792 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
H3f3aP84244 Gm21461-201ENSMUST00000200382 863 ntBASIC5.45□□□□□ -1.54
H3f3aP84244 4930518I17Rik-201ENSMUST00000203902 656 ntBASIC5.45□□□□□ -1.54
H3f3aP84244 AC165292.1-201ENSMUST00000215218 620 ntBASIC5.45□□□□□ -1.54
H3f3aP84244 Gm33312-201ENSMUST00000222443 332 ntBASIC5.45□□□□□ -1.54
H3f3aP84244 CT009556.1-201ENSMUST00000227282 449 ntBASIC5.45□□□□□ -1.54
H3f3aP84244 Mir194-1-201ENSMUST00000083647 67 ntBASIC5.45□□□□□ -1.54
H3f3aP84244 Gm5832-201ENSMUST00000121704 1582 ntBASIC5.45□□□□□ -1.54
H3f3aP84244 Gm1527-201ENSMUST00000099170 2120 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
H3f3aP84244 A930006L05Rik-201ENSMUST00000186821 2814 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
H3f3aP84244 Gm12388-201ENSMUST00000119112 1887 ntBASIC5.45□□□□□ -1.54
H3f3aP84244 Gm37894-201ENSMUST00000195416 2599 ntBASIC5.45□□□□□ -1.54
H3f3aP84244 Rfx4-203ENSMUST00000095388 3274 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
H3f3aP84244 Pnpla8-202ENSMUST00000122902 2728 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
H3f3aP84244 Gm15228-201ENSMUST00000142044 3440 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
H3f3aP84244 1700011H14Rik-205ENSMUST00000228936 3444 ntAPPRIS P2 BASIC5.45□□□□□ -1.54
H3f3aP84244 Olfr1295-203ENSMUST00000217772 5539 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
H3f3aP84244 Gje1-201ENSMUST00000020016 1480 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
H3f3aP84244 Gm43981-201ENSMUST00000203285 1467 ntBASIC5.45□□□□□ -1.54
H3f3aP84244 4921524L21Rik-201ENSMUST00000044829 1480 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
H3f3aP84244 Clmn-201ENSMUST00000109936 11866 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
H3f3aP84244 Ccdc186-201ENSMUST00000076085 2754 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
H3f3aP84244 D030045P18Rik-202ENSMUST00000213571 2370 ntBASIC5.44□□□□□ -1.54
H3f3aP84244 Rnf24-201ENSMUST00000059372 5978 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
H3f3aP84244 Gm44043-201ENSMUST00000203426 3253 ntBASIC5.44□□□□□ -1.54
H3f3aP84244 Vmn1r8-203ENSMUST00000228690 1699 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
H3f3aP84244 Ddx58-201ENSMUST00000037907 3874 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
H3f3aP84244 Sgip1-205ENSMUST00000106882 6061 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
H3f3aP84244 Lrrtm4-208ENSMUST00000147663 3033 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
H3f3aP84244 Vwc2l-201ENSMUST00000053922 4655 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
H3f3aP84244 Gm26144-201ENSMUST00000104475 132 ntBASIC5.44□□□□□ -1.54
H3f3aP84244 Smt3h1-ps-201ENSMUST00000117126 280 ntBASIC5.44□□□□□ -1.54
H3f3aP84244 A730017C20Rik-203ENSMUST00000118510 785 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
H3f3aP84244 Gm13493-201ENSMUST00000120318 493 ntBASIC5.44□□□□□ -1.54
H3f3aP84244 Gm12307-201ENSMUST00000120581 590 ntBASIC5.44□□□□□ -1.54
H3f3aP84244 Tmem216-203ENSMUST00000123788 935 ntAPPRIS P1 TSL 3 BASIC5.44□□□□□ -1.54
H3f3aP84244 Gm13373-201ENSMUST00000144634 655 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
H3f3aP84244 Gm28782-201ENSMUST00000185980 414 ntTSL 3 BASIC5.44□□□□□ -1.54
H3f3aP84244 Gm28610-201ENSMUST00000187716 406 ntTSL 2 BASIC5.44□□□□□ -1.54
H3f3aP84244 Gm28179-202ENSMUST00000189029 327 ntTSL 5 BASIC5.44□□□□□ -1.54
H3f3aP84244 Gm28532-201ENSMUST00000190408 572 ntTSL 5 BASIC5.44□□□□□ -1.54
H3f3aP84244 Ighv5-3-201ENSMUST00000195336 322 ntBASIC5.44□□□□□ -1.54
H3f3aP84244 Gm6070-201ENSMUST00000207275 419 ntBASIC5.44□□□□□ -1.54
H3f3aP84244 Gm39119-201ENSMUST00000208466 951 ntTSL 5 BASIC5.44□□□□□ -1.54
H3f3aP84244 Gm10688-201ENSMUST00000214985 520 ntBASIC5.44□□□□□ -1.54
H3f3aP84244 Tmem45a2-203ENSMUST00000227043 1447 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
H3f3aP84244 Gm8256-203ENSMUST00000228692 591 ntBASIC5.44□□□□□ -1.54
H3f3aP84244 Olfr794-201ENSMUST00000059957 963 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
H3f3aP84244 Gm38412-201ENSMUST00000199205 3895 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
H3f3aP84244 Hyal4-201ENSMUST00000031691 3269 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
H3f3aP84244 Celf2-201ENSMUST00000002176 7718 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
H3f3aP84244 Dock2-202ENSMUST00000101364 1616 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
H3f3aP84244 Vrk2-202ENSMUST00000109504 1642 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
H3f3aP84244 Gm12794-201ENSMUST00000052027 1452 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
H3f3aP84244 Gm10636-201ENSMUST00000197639 2419 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
H3f3aP84244 Olfr1377-202ENSMUST00000213291 2441 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
H3f3aP84244 Chek1-201ENSMUST00000034625 3397 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
H3f3aP84244 Gbp3-203ENSMUST00000106222 2629 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
H3f3aP84244 Zbed4-ps2-201ENSMUST00000187003 3448 ntBASIC5.44□□□□□ -1.54
H3f3aP84244 Ftx-205ENSMUST00000156211 4215 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
H3f3aP84244 Oxr1-201ENSMUST00000022918 4232 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
H3f3aP84244 Il5-201ENSMUST00000048605 1537 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
H3f3aP84244 AU023762-203ENSMUST00000209897 2179 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
H3f3aP84244 Nmrk1-201ENSMUST00000042392 1357 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
H3f3aP84244 AC160029.1-201ENSMUST00000219628 2678 ntBASIC5.43□□□□□ -1.54
H3f3aP84244 Specc1-217ENSMUST00000202905 3841 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
H3f3aP84244 Gm6145-206ENSMUST00000211251 2850 ntTSL 5 BASIC5.43□□□□□ -1.54
H3f3aP84244 Olfr559-202ENSMUST00000215657 1560 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
H3f3aP84244 Psd3-214ENSMUST00000212960 4562 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
H3f3aP84244 Vmn1r36-204ENSMUST00000226829 1923 ntAPPRIS P2 BASIC5.43□□□□□ -1.54
H3f3aP84244 Nr3c1-204ENSMUST00000115571 6327 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
H3f3aP84244 Olfr398-203ENSMUST00000214334 5348 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
H3f3aP84244 Trbv4-201ENSMUST00000103265 393 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
H3f3aP84244 Apoa2-203ENSMUST00000111320 470 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
H3f3aP84244 Apoa2-204ENSMUST00000111321 518 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
H3f3aP84244 Gm14510-201ENSMUST00000116165 1092 ntBASIC5.43□□□□□ -1.54
H3f3aP84244 Gm9836-201ENSMUST00000117132 216 ntBASIC5.43□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms