Protein–RNA interactions for Protein: P70362

Ufd1, Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1P70362 A930017M01Rik-201ENSMUST00000081361 2884 ntBASIC5.17□□□□□ -1.58
Ufd1P70362 Hgf-204ENSMUST00000199581 3468 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Ufd1P70362 Olfr329-ps-203ENSMUST00000219448 4052 ntAPPRIS P2 TSL 5 BASIC5.17□□□□□ -1.58
Ufd1P70362 BC055308-201ENSMUST00000193380 2538 ntBASIC5.17□□□□□ -1.58
Ufd1P70362 Nlrp1b-202ENSMUST00000108514 3541 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
Ufd1P70362 Gm37482-201ENSMUST00000194899 2791 ntBASIC5.16□□□□□ -1.58
Ufd1P70362 Nme7-202ENSMUST00000191947 1635 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Ufd1P70362 Tmem156-204ENSMUST00000212080 1411 ntAPPRIS P5 TSL 5 BASIC5.16□□□□□ -1.58
Ufd1P70362 Zscan4c-201ENSMUST00000131379 2276 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Ufd1P70362 Gm29506-201ENSMUST00000191045 2078 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Ufd1P70362 Lamp3-201ENSMUST00000081880 3343 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Ufd1P70362 Kcnj2-201ENSMUST00000042970 5444 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Ufd1P70362 CT009734.1-201ENSMUST00000227657 1687 ntBASIC5.16□□□□□ -1.58
Ufd1P70362 Mir674-201ENSMUST00000102421 100 ntBASIC5.16□□□□□ -1.58
Ufd1P70362 Gm23294-201ENSMUST00000104150 164 ntBASIC5.16□□□□□ -1.58
Ufd1P70362 Spaca7-201ENSMUST00000010579 762 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Ufd1P70362 Skint1-201ENSMUST00000117379 875 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Ufd1P70362 Mgst1-204ENSMUST00000120302 559 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
Ufd1P70362 Olfr1004-ps1-201ENSMUST00000120361 580 ntBASIC5.16□□□□□ -1.58
Ufd1P70362 Gm3810-201ENSMUST00000122413 476 ntBASIC5.16□□□□□ -1.58
Ufd1P70362 Gm14133-201ENSMUST00000139471 1274 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Ufd1P70362 Gm22728-201ENSMUST00000158087 129 ntBASIC5.16□□□□□ -1.58
Ufd1P70362 Skint1-203ENSMUST00000161389 960 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Ufd1P70362 Snhg5-201ENSMUST00000180563 1004 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Ufd1P70362 4930532G15Rik-201ENSMUST00000180632 699 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Ufd1P70362 Gm28846-201ENSMUST00000189161 368 ntBASIC5.16□□□□□ -1.58
Ufd1P70362 Gm28289-201ENSMUST00000189331 315 ntTSL 5 BASIC5.16□□□□□ -1.58
Ufd1P70362 Gm31831-201ENSMUST00000196240 684 ntTSL 3 BASIC5.16□□□□□ -1.58
Ufd1P70362 Gm29736-201ENSMUST00000198189 385 ntBASIC5.16□□□□□ -1.58
Ufd1P70362 Gm23604-202ENSMUST00000198428 137 ntBASIC5.16□□□□□ -1.58
Ufd1P70362 Sox2ot-214ENSMUST00000198758 1286 ntTSL 2 BASIC5.16□□□□□ -1.58
Ufd1P70362 AC099934.1-201ENSMUST00000200493 79 ntBASIC5.16□□□□□ -1.58
Ufd1P70362 Klra13-ps-203ENSMUST00000204367 850 ntBASIC5.16□□□□□ -1.58
Ufd1P70362 Gm44199-201ENSMUST00000205219 739 ntTSL 3 BASIC5.16□□□□□ -1.58
Ufd1P70362 Olfr1348-204ENSMUST00000208066 1135 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Ufd1P70362 Spaca7-202ENSMUST00000209428 758 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Ufd1P70362 Gm41231-201ENSMUST00000211525 449 ntTSL 5 BASIC5.16□□□□□ -1.58
Ufd1P70362 AC171206.1-201ENSMUST00000213612 213 ntBASIC5.16□□□□□ -1.58
Ufd1P70362 AC164550.1-201ENSMUST00000217821 1066 ntBASIC5.16□□□□□ -1.58
Ufd1P70362 Gm6991-201ENSMUST00000218475 1178 ntBASIC5.16□□□□□ -1.58
Ufd1P70362 Gm4808-201ENSMUST00000222283 1203 ntBASIC5.16□□□□□ -1.58
Ufd1P70362 AC132260.1-201ENSMUST00000225499 734 ntBASIC5.16□□□□□ -1.58
Ufd1P70362 AC124395.1-201ENSMUST00000225940 707 ntBASIC5.16□□□□□ -1.58
Ufd1P70362 AC154757.2-201ENSMUST00000228885 743 ntBASIC5.16□□□□□ -1.58
Ufd1P70362 Rida-201ENSMUST00000022946 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Ufd1P70362 Rps26-201ENSMUST00000026420 681 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Ufd1P70362 Olfr796-201ENSMUST00000037071 933 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Ufd1P70362 Nup43-201ENSMUST00000040135 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Ufd1P70362 Magea4-201ENSMUST00000048675 948 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Ufd1P70362 Olfr266-201ENSMUST00000059486 1027 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Ufd1P70362 Pou1f1-204ENSMUST00000176330 1310 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Ufd1P70362 CT030185.2-201ENSMUST00000222614 1310 ntBASIC5.16□□□□□ -1.58
Ufd1P70362 Gm136-201ENSMUST00000095129 1311 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Ufd1P70362 Vmn1r235-201ENSMUST00000060603 1781 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Ufd1P70362 Gm16344-201ENSMUST00000150084 1567 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Ufd1P70362 9530036O11Rik-202ENSMUST00000181202 2926 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Ufd1P70362 Cdh17-201ENSMUST00000029871 3462 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Ufd1P70362 Arhgap12-202ENSMUST00000077128 4431 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
Ufd1P70362 Ap5m1-208ENSMUST00000228238 3514 ntBASIC5.15□□□□□ -1.58
Ufd1P70362 Kcnu1-201ENSMUST00000098858 3536 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Ufd1P70362 Gm37725-201ENSMUST00000193965 2125 ntBASIC5.15□□□□□ -1.58
Ufd1P70362 Gm37773-201ENSMUST00000194141 2120 ntBASIC5.15□□□□□ -1.58
Ufd1P70362 Dhrs9-201ENSMUST00000063690 4281 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Ufd1P70362 AC156569.1-201ENSMUST00000222020 3841 ntBASIC5.15□□□□□ -1.58
Ufd1P70362 Olfr947-ps1-201ENSMUST00000214075 2165 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.58
Ufd1P70362 CT025604.1-201ENSMUST00000221111 3436 ntBASIC5.15□□□□□ -1.58
Ufd1P70362 Gm39327-201ENSMUST00000213594 1982 ntTSL 5 BASIC5.15□□□□□ -1.58
Ufd1P70362 Omd-202ENSMUST00000221170 2249 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Ufd1P70362 Spef2-206ENSMUST00000208854 7038 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
Ufd1P70362 AC134577.3-201ENSMUST00000226490 3000 ntBASIC5.15□□□□□ -1.58
Ufd1P70362 Gm26806-201ENSMUST00000180403 1519 ntTSL 5 BASIC5.15□□□□□ -1.58
Ufd1P70362 Gm42520-201ENSMUST00000199642 1502 ntBASIC5.15□□□□□ -1.58
Ufd1P70362 Gm26422-201ENSMUST00000104276 132 ntBASIC5.15□□□□□ -1.59
Ufd1P70362 Gm12169-201ENSMUST00000109228 1065 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Ufd1P70362 Gm15016-201ENSMUST00000117300 720 ntBASIC5.15□□□□□ -1.59
Ufd1P70362 Gm11926-201ENSMUST00000118520 430 ntBASIC5.15□□□□□ -1.59
Ufd1P70362 Gm7058-201ENSMUST00000119209 902 ntBASIC5.15□□□□□ -1.59
Ufd1P70362 Gm14098-201ENSMUST00000119295 623 ntBASIC5.15□□□□□ -1.59
Ufd1P70362 Gm12104-201ENSMUST00000120359 979 ntBASIC5.15□□□□□ -1.59
Ufd1P70362 Gm11370-201ENSMUST00000120583 260 ntBASIC5.15□□□□□ -1.59
Ufd1P70362 Gm22604-201ENSMUST00000157604 311 ntBASIC5.15□□□□□ -1.59
Ufd1P70362 Mir1945-201ENSMUST00000157919 78 ntBASIC5.15□□□□□ -1.59
Ufd1P70362 Dab2-209ENSMUST00000161040 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
Ufd1P70362 1700091H14Rik-201ENSMUST00000167772 590 ntBASIC5.15□□□□□ -1.59
Ufd1P70362 Gm17233-201ENSMUST00000168470 698 ntTSL 3 BASIC5.15□□□□□ -1.59
Ufd1P70362 Csnk2b-209ENSMUST00000174779 632 ntTSL 2 BASIC5.15□□□□□ -1.59
Ufd1P70362 Gm5885-201ENSMUST00000178578 648 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Ufd1P70362 Pfdn6-206ENSMUST00000179418 514 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.59
Ufd1P70362 Gm27026-201ENSMUST00000183003 892 ntBASIC5.15□□□□□ -1.59
Ufd1P70362 Gm27160-201ENSMUST00000184837 199 ntBASIC5.15□□□□□ -1.59
Ufd1P70362 Gm28237-201ENSMUST00000186563 641 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Ufd1P70362 Gm29482-201ENSMUST00000187845 230 ntTSL 3 BASIC5.15□□□□□ -1.59
Ufd1P70362 Gm29141-201ENSMUST00000190357 882 ntBASIC5.15□□□□□ -1.59
Ufd1P70362 Gm6525-201ENSMUST00000193882 1029 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Ufd1P70362 Gm7512-201ENSMUST00000195217 1170 ntBASIC5.15□□□□□ -1.59
Ufd1P70362 Gm31887-201ENSMUST00000197661 501 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Ufd1P70362 Gm42776-201ENSMUST00000198031 406 ntBASIC5.15□□□□□ -1.59
Ufd1P70362 Gm19653-201ENSMUST00000204326 1039 ntBASIC5.15□□□□□ -1.59
Ufd1P70362 Gm31036-201ENSMUST00000212925 521 ntTSL 3 BASIC5.15□□□□□ -1.59
Ufd1P70362 AC166902.2-201ENSMUST00000215193 837 ntTSL 5 BASIC5.15□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 96.7 ms