Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Olfr55-203ENSMUST00000214891 4428 ntTSL 5 BASIC5.64□□□□□ -1.51
Cdh11P55288 Nxf7-202ENSMUST00000113163 2233 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Cdh11P55288 AC154682.1-201ENSMUST00000225871 3124 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Cdh11P55288 Slc35a5-201ENSMUST00000023344 4233 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Cdh11P55288 Gm44440-201ENSMUST00000203139 2373 ntBASIC5.64□□□□□ -1.51
Cdh11P55288 Gm10826-201ENSMUST00000215366 3304 ntBASIC5.64□□□□□ -1.51
Cdh11P55288 Dclre1c-204ENSMUST00000115066 3828 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Cdh11P55288 Olfr2-205ENSMUST00000214105 5798 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Cdh11P55288 Gm45838-201ENSMUST00000207355 2447 ntBASIC5.64□□□□□ -1.51
Cdh11P55288 Pcdh15-222ENSMUST00000147189 6806 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Cdh11P55288 Reep3-202ENSMUST00000217841 2925 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Cdh11P55288 Cd209a-201ENSMUST00000012847 1482 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Cdh11P55288 Gm45520-201ENSMUST00000210109 2031 ntBASIC5.64□□□□□ -1.51
Cdh11P55288 Ect2-203ENSMUST00000108300 4086 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Cdh11P55288 Gm16344-201ENSMUST00000150084 1567 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Cdh11P55288 Gm2080-201ENSMUST00000211299 1573 ntBASIC5.63□□□□□ -1.51
Cdh11P55288 Fat1-205ENSMUST00000191428 14814 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Cdh11P55288 Smgc-202ENSMUST00000100293 2878 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Cdh11P55288 Gm37775-201ENSMUST00000194120 2313 ntBASIC5.63□□□□□ -1.51
Cdh11P55288 Osbpl9-216ENSMUST00000161363 2356 ntTSL 5 BASIC5.63□□□□□ -1.51
Cdh11P55288 Gm21269-201ENSMUST00000206521 12456 ntTSL 3 BASIC5.63□□□□□ -1.51
Cdh11P55288 Ndufaf4-201ENSMUST00000029925 3632 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Cdh11P55288 Trbv13-3-201ENSMUST00000103271 340 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Cdh11P55288 Ighv1-64-201ENSMUST00000103535 405 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Cdh11P55288 Gm24069-201ENSMUST00000104512 127 ntBASIC5.63□□□□□ -1.51
Cdh11P55288 Insl5-202ENSMUST00000106869 438 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Cdh11P55288 Gm649-201ENSMUST00000117284 1054 ntBASIC5.63□□□□□ -1.51
Cdh11P55288 Gm14356-201ENSMUST00000118322 869 ntBASIC5.63□□□□□ -1.51
Cdh11P55288 Gm11920-201ENSMUST00000118491 563 ntBASIC5.63□□□□□ -1.51
Cdh11P55288 Rpl5-ps2-201ENSMUST00000119057 891 ntBASIC5.63□□□□□ -1.51
Cdh11P55288 Gm7658-201ENSMUST00000119064 1124 ntBASIC5.63□□□□□ -1.51
Cdh11P55288 Gm14375-201ENSMUST00000119490 855 ntBASIC5.63□□□□□ -1.51
Cdh11P55288 n-R5s201-201ENSMUST00000122622 116 ntBASIC5.63□□□□□ -1.51
Cdh11P55288 Fam229b-202ENSMUST00000124941 721 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Cdh11P55288 2210411M09Rik-201ENSMUST00000128545 643 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Cdh11P55288 Rpl35a-ps5-201ENSMUST00000137013 333 ntBASIC5.63□□□□□ -1.51
Cdh11P55288 Gm23207-201ENSMUST00000158665 102 ntBASIC5.63□□□□□ -1.51
Cdh11P55288 Speer1-201ENSMUST00000172106 1123 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Cdh11P55288 Vmn2r-ps3-201ENSMUST00000176077 1101 ntBASIC5.63□□□□□ -1.51
Cdh11P55288 Esd-208ENSMUST00000177137 853 ntTSL 5 BASIC5.63□□□□□ -1.51
Cdh11P55288 Olr1-203ENSMUST00000182784 570 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Cdh11P55288 Gm28455-201ENSMUST00000189105 1290 ntBASIC5.63□□□□□ -1.51
Cdh11P55288 Gm29011-201ENSMUST00000191059 712 ntBASIC5.63□□□□□ -1.51
Cdh11P55288 Gm17790-201ENSMUST00000191545 1228 ntBASIC5.63□□□□□ -1.51
Cdh11P55288 Gm9517-201ENSMUST00000195021 874 ntBASIC5.63□□□□□ -1.51
Cdh11P55288 Gm7554-201ENSMUST00000202282 574 ntBASIC5.63□□□□□ -1.51
Cdh11P55288 Gm18600-201ENSMUST00000207205 505 ntBASIC5.63□□□□□ -1.51
Cdh11P55288 Cd209a-204ENSMUST00000208960 844 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
Cdh11P55288 Gm45479-201ENSMUST00000211613 802 ntTSL 3 BASIC5.63□□□□□ -1.51
Cdh11P55288 AC153537.1-201ENSMUST00000215530 858 ntTSL 5 BASIC5.63□□□□□ -1.51
Cdh11P55288 AC133207.2-201ENSMUST00000218430 237 ntTSL 5 BASIC5.63□□□□□ -1.51
Cdh11P55288 AC134917.2-201ENSMUST00000223354 124 ntBASIC5.63□□□□□ -1.51
Cdh11P55288 AC154573.2-201ENSMUST00000224174 378 ntBASIC5.63□□□□□ -1.51
Cdh11P55288 AC158388.1-201ENSMUST00000225441 256 ntBASIC5.63□□□□□ -1.51
Cdh11P55288 Lyrm1-201ENSMUST00000054440 752 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Cdh11P55288 Spink14-201ENSMUST00000060328 566 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Cdh11P55288 Gm10037-201ENSMUST00000060609 315 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
Cdh11P55288 Gm10540-201ENSMUST00000097581 276 ntBASIC5.63□□□□□ -1.51
Cdh11P55288 Olfr678-201ENSMUST00000098160 942 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Cdh11P55288 Olfr633-201ENSMUST00000098188 939 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Cdh11P55288 1700057G04Rik-201ENSMUST00000098477 1052 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Cdh11P55288 Olfr1353-201ENSMUST00000039718 1992 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
Cdh11P55288 Gm33594-201ENSMUST00000209502 1333 ntTSL 5 BASIC5.63□□□□□ -1.51
Cdh11P55288 Ncoa4-201ENSMUST00000111994 3343 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Cdh11P55288 Gm4924-203ENSMUST00000210381 3330 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
Cdh11P55288 Angptl1-201ENSMUST00000027885 2651 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Cdh11P55288 Ppig-202ENSMUST00000090858 6127 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Cdh11P55288 Tet1-206ENSMUST00000174189 14369 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
Cdh11P55288 Olfr25-202ENSMUST00000212354 1362 ntAPPRIS ALT2 BASIC5.63□□□□□ -1.51
Cdh11P55288 Gm20644-201ENSMUST00000176721 2063 ntBASIC5.63□□□□□ -1.51
Cdh11P55288 Gm37289-201ENSMUST00000195409 1402 ntBASIC5.63□□□□□ -1.51
Cdh11P55288 Iqub-201ENSMUST00000052277 3651 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Cdh11P55288 Olfr465-ps1-201ENSMUST00000206324 2234 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Cdh11P55288 Stk32a-201ENSMUST00000045477 3765 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Cdh11P55288 Gm37076-201ENSMUST00000192033 2294 ntBASIC5.63□□□□□ -1.51
Cdh11P55288 Olfr1500-207ENSMUST00000219674 2287 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Cdh11P55288 Gm43891-201ENSMUST00000205132 3112 ntBASIC5.63□□□□□ -1.51
Cdh11P55288 BC018473-204ENSMUST00000156293 4753 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Cdh11P55288 Gm16092-201ENSMUST00000161449 2405 ntTSL 5 BASIC5.63□□□□□ -1.51
Cdh11P55288 Palmd-202ENSMUST00000119557 3305 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Cdh11P55288 Gm45424-201ENSMUST00000210575 3300 ntBASIC5.63□□□□□ -1.51
Cdh11P55288 Gm37474-201ENSMUST00000194812 1814 ntBASIC5.62□□□□□ -1.51
Cdh11P55288 Gm44416-201ENSMUST00000204055 2066 ntBASIC5.62□□□□□ -1.51
Cdh11P55288 Gk-208ENSMUST00000156390 4245 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
Cdh11P55288 Nfatc3-206ENSMUST00000212742 3207 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Cdh11P55288 Gm44043-201ENSMUST00000203426 3253 ntBASIC5.62□□□□□ -1.51
Cdh11P55288 Bche-201ENSMUST00000029367 6210 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Cdh11P55288 Igkv9-120-201ENSMUST00000103316 353 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Cdh11P55288 Traj18-201ENSMUST00000103723 66 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Cdh11P55288 Gm26422-201ENSMUST00000104276 132 ntBASIC5.62□□□□□ -1.51
Cdh11P55288 Gm22374-201ENSMUST00000104583 132 ntBASIC5.62□□□□□ -1.51
Cdh11P55288 Mup3-203ENSMUST00000107488 984 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Cdh11P55288 Synj2bp-202ENSMUST00000114201 1121 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Cdh11P55288 Gm14382-201ENSMUST00000117374 437 ntBASIC5.62□□□□□ -1.51
Cdh11P55288 Gm11462-201ENSMUST00000117749 562 ntBASIC5.62□□□□□ -1.51
Cdh11P55288 Gm11256-201ENSMUST00000118109 829 ntBASIC5.62□□□□□ -1.51
Cdh11P55288 Gm13299-201ENSMUST00000133644 425 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Cdh11P55288 Gm13307-202ENSMUST00000142990 425 ntTSL 5 BASIC5.62□□□□□ -1.51
Cdh11P55288 Gm13373-201ENSMUST00000144634 655 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Cdh11P55288 Sox5os4-201ENSMUST00000155562 365 ntTSL 3 BASIC5.62□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 99.7 ms