Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm12041-201ENSMUST00000121606 602 ntBASIC8.07□□□□□ -1.12
Rfx1P48377 Mup9-204ENSMUST00000122381 864 ntAPPRIS P2 TSL 2 BASIC8.07□□□□□ -1.12
Rfx1P48377 Gm11681-201ENSMUST00000127337 870 ntTSL 2 BASIC8.07□□□□□ -1.12
Rfx1P48377 Gm14710-201ENSMUST00000146082 1066 ntBASIC8.07□□□□□ -1.12
Rfx1P48377 Gm14549-201ENSMUST00000154993 1035 ntTSL 5 BASIC8.07□□□□□ -1.12
Rfx1P48377 Gm14419-203ENSMUST00000156844 752 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Rfx1P48377 Gm25722-201ENSMUST00000157498 279 ntBASIC8.07□□□□□ -1.12
Rfx1P48377 Cldn34a-201ENSMUST00000164764 636 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Rfx1P48377 Gm8323-201ENSMUST00000168436 1201 ntBASIC8.07□□□□□ -1.12
Rfx1P48377 Gm17234-201ENSMUST00000172128 392 ntTSL 3 BASIC8.07□□□□□ -1.12
Rfx1P48377 Gm10074-201ENSMUST00000174543 249 ntBASIC8.07□□□□□ -1.12
Rfx1P48377 Gm20663-201ENSMUST00000176647 474 ntTSL 3 BASIC8.07□□□□□ -1.12
Rfx1P48377 Gm4904-201ENSMUST00000178243 1195 ntBASIC8.07□□□□□ -1.12
Rfx1P48377 Gm2871-201ENSMUST00000179984 1204 ntBASIC8.07□□□□□ -1.12
Rfx1P48377 Mrgpra14-201ENSMUST00000189782 913 ntBASIC8.07□□□□□ -1.12
Rfx1P48377 Gm17833-201ENSMUST00000197629 1065 ntBASIC8.07□□□□□ -1.12
Rfx1P48377 Gm43036-201ENSMUST00000200594 373 ntBASIC8.07□□□□□ -1.12
Rfx1P48377 Gm18861-201ENSMUST00000202509 1186 ntBASIC8.07□□□□□ -1.12
Rfx1P48377 Mgam-206ENSMUST00000202779 3821 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Rfx1P48377 4930425L21Rik-202ENSMUST00000205073 871 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Rfx1P48377 Gm5586-201ENSMUST00000206264 795 ntBASIC8.07□□□□□ -1.12
Rfx1P48377 Gm8556-201ENSMUST00000210437 664 ntBASIC8.07□□□□□ -1.12
Rfx1P48377 Gm21320-201ENSMUST00000211875 861 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Rfx1P48377 AC153821.1-201ENSMUST00000217893 581 ntTSL 2 BASIC8.07□□□□□ -1.12
Rfx1P48377 AC160970.1-201ENSMUST00000219311 475 ntBASIC8.07□□□□□ -1.12
Rfx1P48377 Gm36756-201ENSMUST00000222011 1214 ntTSL 5 BASIC8.07□□□□□ -1.12
Rfx1P48377 AC139209.2-201ENSMUST00000227680 1208 ntBASIC8.07□□□□□ -1.12
Rfx1P48377 Myl12a-201ENSMUST00000024846 980 ntAPPRIS P1 TSL 2 BASIC8.07□□□□□ -1.12
Rfx1P48377 4930550C14Rik-201ENSMUST00000005262 1237 ntAPPRIS P2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Rfx1P48377 Tas2r139-201ENSMUST00000057686 960 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Rfx1P48377 Olfr429-201ENSMUST00000060693 943 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Rfx1P48377 Vmn1r214-201ENSMUST00000074252 1227 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Rfx1P48377 Gm24405-201ENSMUST00000083033 167 ntBASIC8.07□□□□□ -1.12
Rfx1P48377 Gm22864-201ENSMUST00000083950 130 ntBASIC8.07□□□□□ -1.12
Rfx1P48377 Gm7493-201ENSMUST00000085919 626 ntBASIC8.07□□□□□ -1.12
Rfx1P48377 Olfr154-201ENSMUST00000099918 1079 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Rfx1P48377 4931406B18Rik-203ENSMUST00000163619 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Rfx1P48377 Olfr859-202ENSMUST00000212540 9532 ntAPPRIS P1 TSL 3 BASIC8.07□□□□□ -1.12
Rfx1P48377 Trps1-207ENSMUST00000184885 3492 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Rfx1P48377 Gm7982-202ENSMUST00000136313 1536 ntAPPRIS P5 TSL 5 BASIC8.07□□□□□ -1.12
Rfx1P48377 Hsf3-204ENSMUST00000164693 2076 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Rfx1P48377 Gm20362-201ENSMUST00000204808 2072 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Rfx1P48377 Cpa6-201ENSMUST00000035577 1932 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Rfx1P48377 Atp2b1-201ENSMUST00000020107 7130 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
Rfx1P48377 Gm43953-201ENSMUST00000203709 2867 ntBASIC8.07□□□□□ -1.12
Rfx1P48377 Gm44620-201ENSMUST00000209183 2887 ntBASIC8.07□□□□□ -1.12
Rfx1P48377 Gm15232-201ENSMUST00000146929 2318 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Rfx1P48377 Etl4-202ENSMUST00000066509 7197 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
Rfx1P48377 Gm39465-201ENSMUST00000213810 9813 ntTSL 3 BASIC8.07□□□□□ -1.12
Rfx1P48377 Slc28a3-201ENSMUST00000022036 4567 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Rfx1P48377 2700078F05Rik-201ENSMUST00000194331 3244 ntBASIC8.07□□□□□ -1.12
Rfx1P48377 Gm38126-201ENSMUST00000195297 4003 ntBASIC8.06□□□□□ -1.12
Rfx1P48377 Ugt2b38-201ENSMUST00000072818 1891 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Rfx1P48377 Gm8700-201ENSMUST00000222187 3054 ntBASIC8.06□□□□□ -1.12
Rfx1P48377 B3gnt5-201ENSMUST00000079780 4258 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Rfx1P48377 Zbtb44-202ENSMUST00000167346 1308 ntTSL 3 BASIC8.06□□□□□ -1.12
Rfx1P48377 Zfp976-201ENSMUST00000098503 1976 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
Rfx1P48377 Gm20679-201ENSMUST00000177285 1402 ntBASIC8.06□□□□□ -1.12
Rfx1P48377 Gm43502-201ENSMUST00000200263 2596 ntBASIC8.06□□□□□ -1.12
Rfx1P48377 Gm31822-201ENSMUST00000216096 2572 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Rfx1P48377 3000002C10Rik-203ENSMUST00000144161 3977 ntTSL 2 BASIC8.06□□□□□ -1.12
Rfx1P48377 Fancd2-208ENSMUST00000204827 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Rfx1P48377 Trappc2-201ENSMUST00000112192 1294 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Rfx1P48377 Plac1-202ENSMUST00000114843 1201 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Rfx1P48377 Gm12393-201ENSMUST00000117084 848 ntBASIC8.06□□□□□ -1.12
Rfx1P48377 Rpl21-ps9-201ENSMUST00000119897 482 ntBASIC8.06□□□□□ -1.12
Rfx1P48377 Cd48-201ENSMUST00000015499 922 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Rfx1P48377 Gm24190-201ENSMUST00000157976 216 ntBASIC8.06□□□□□ -1.12
Rfx1P48377 AU015336-201ENSMUST00000159040 849 ntTSL 5 BASIC8.06□□□□□ -1.12
Rfx1P48377 Vmn1r-ps27-201ENSMUST00000174619 985 ntBASIC8.06□□□□□ -1.12
Rfx1P48377 Obox4-ps30-201ENSMUST00000176032 948 ntBASIC8.06□□□□□ -1.12
Rfx1P48377 Obox4-ps36-201ENSMUST00000177206 723 ntBASIC8.06□□□□□ -1.12
Rfx1P48377 Obox4-ps16-201ENSMUST00000177624 1137 ntBASIC8.06□□□□□ -1.12
Rfx1P48377 Obox4-ps17-201ENSMUST00000178341 1137 ntBASIC8.06□□□□□ -1.12
Rfx1P48377 Gm23145-201ENSMUST00000178912 79 ntBASIC8.06□□□□□ -1.12
Rfx1P48377 Crnde-205ENSMUST00000179400 651 ntTSL 2 BASIC8.06□□□□□ -1.12
Rfx1P48377 Obox4-ps18-201ENSMUST00000179441 1137 ntBASIC8.06□□□□□ -1.12
Rfx1P48377 Rps19-ps6-201ENSMUST00000181233 438 ntBASIC8.06□□□□□ -1.12
Rfx1P48377 Mir6337-201ENSMUST00000184194 105 ntBASIC8.06□□□□□ -1.12
Rfx1P48377 Gm5575-201ENSMUST00000190879 398 ntBASIC8.06□□□□□ -1.12
Rfx1P48377 Gm37727-201ENSMUST00000191637 819 ntBASIC8.06□□□□□ -1.12
Rfx1P48377 Gm37425-201ENSMUST00000193184 432 ntTSL 5 BASIC8.06□□□□□ -1.12
Rfx1P48377 Rrh-205ENSMUST00000196902 1250 ntAPPRIS P2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Rfx1P48377 Gm24826-202ENSMUST00000197298 216 ntBASIC8.06□□□□□ -1.12
Rfx1P48377 Traj59-202ENSMUST00000197589 62 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
Rfx1P48377 Gm44722-201ENSMUST00000206473 436 ntBASIC8.06□□□□□ -1.12
Rfx1P48377 Gm4270-201ENSMUST00000209666 406 ntBASIC8.06□□□□□ -1.12
Rfx1P48377 Gm45764-201ENSMUST00000213047 571 ntTSL 5 BASIC8.06□□□□□ -1.12
Rfx1P48377 Gm40418-201ENSMUST00000218806 1013 ntTSL 5 BASIC8.06□□□□□ -1.12
Rfx1P48377 AC109214.2-201ENSMUST00000220089 358 ntBASIC8.06□□□□□ -1.12
Rfx1P48377 AC152819.1-201ENSMUST00000220435 871 ntTSL 5 BASIC8.06□□□□□ -1.12
Rfx1P48377 4930474N09Rik-201ENSMUST00000223511 1176 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Rfx1P48377 Olfr730-201ENSMUST00000051453 957 ntAPPRIS P2 BASIC8.06□□□□□ -1.12
Rfx1P48377 Prl2c1-201ENSMUST00000054932 681 ntAPPRIS P2 TSL 5 BASIC8.06□□□□□ -1.12
Rfx1P48377 Olfr646-201ENSMUST00000098182 939 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
Rfx1P48377 Zfp568-202ENSMUST00000146074 6867 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Rfx1P48377 Gm14988-201ENSMUST00000117224 1548 ntBASIC8.06□□□□□ -1.12
Rfx1P48377 Olfr799-204ENSMUST00000216446 1513 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Rfx1P48377 Zfp708-202ENSMUST00000109743 2536 ntAPPRIS ALT2 TSL 2 BASIC8.06□□□□□ -1.12
Rfx1P48377 Cyb5r2-201ENSMUST00000052438 2772 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms