Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm44694-201ENSMUST00000205317 1298 ntBASIC7.24□□□□□ -1.25
Traf1P39428 Gm45196-201ENSMUST00000206751 825 ntBASIC7.24□□□□□ -1.25
Traf1P39428 Camta1-213ENSMUST00000214673 243 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Traf1P39428 Gm18618-201ENSMUST00000222211 473 ntBASIC7.24□□□□□ -1.25
Traf1P39428 Gm33312-201ENSMUST00000222443 332 ntBASIC7.24□□□□□ -1.25
Traf1P39428 AC105407.1-201ENSMUST00000225684 614 ntBASIC7.24□□□□□ -1.25
Traf1P39428 AC159205.4-201ENSMUST00000225964 704 ntBASIC7.24□□□□□ -1.25
Traf1P39428 Gkn3-201ENSMUST00000032127 856 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Traf1P39428 F730035P03Rik-201ENSMUST00000065741 917 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Traf1P39428 Gm24454-201ENSMUST00000083349 132 ntBASIC7.24□□□□□ -1.25
Traf1P39428 Nms-201ENSMUST00000088029 1001 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Traf1P39428 Enpp2-201ENSMUST00000041591 3095 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
Traf1P39428 Fundc2-201ENSMUST00000033541 2562 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Traf1P39428 Gm26648-201ENSMUST00000181925 5831 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Traf1P39428 Olfr1055-203ENSMUST00000213564 1444 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Traf1P39428 Diaph2-202ENSMUST00000113320 8196 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
Traf1P39428 F930017D23Rik-201ENSMUST00000099888 1836 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Traf1P39428 9830132P13Rik-201ENSMUST00000198240 4187 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Traf1P39428 Trp63-208ENSMUST00000115310 5366 ntAPPRIS ALT1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Traf1P39428 Zranb3-203ENSMUST00000112538 4741 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Traf1P39428 Ehf-202ENSMUST00000111174 1307 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Traf1P39428 Olfr398-203ENSMUST00000214334 5348 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Traf1P39428 AI838599-201ENSMUST00000133960 2953 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Traf1P39428 Gm6871-202ENSMUST00000110214 1638 ntAPPRIS P5 TSL 5 BASIC7.23□□□□□ -1.25
Traf1P39428 Ctage5-202ENSMUST00000069430 2869 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Traf1P39428 Igsf10-203ENSMUST00000194546 8393 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Traf1P39428 Gm14326-204ENSMUST00000178829 1665 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Traf1P39428 Ugt2a2-201ENSMUST00000079811 2539 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Traf1P39428 AC141476.1-201ENSMUST00000224988 3387 ntBASIC7.23□□□□□ -1.25
Traf1P39428 Rab11fip2-203ENSMUST00000171986 5363 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Traf1P39428 Klra7-204ENSMUST00000112013 1104 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
Traf1P39428 Gm13114-201ENSMUST00000117605 106 ntBASIC7.23□□□□□ -1.25
Traf1P39428 Gm14173-201ENSMUST00000117690 278 ntBASIC7.23□□□□□ -1.25
Traf1P39428 Gm15366-201ENSMUST00000118433 1019 ntBASIC7.23□□□□□ -1.25
Traf1P39428 Gm13690-201ENSMUST00000118989 285 ntBASIC7.23□□□□□ -1.25
Traf1P39428 Gm22235-201ENSMUST00000157085 110 ntBASIC7.23□□□□□ -1.25
Traf1P39428 Gm23995-201ENSMUST00000158060 129 ntBASIC7.23□□□□□ -1.25
Traf1P39428 Rnf32-211ENSMUST00000168460 1107 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Traf1P39428 Gm27512-201ENSMUST00000175328 126 ntBASIC7.23□□□□□ -1.25
Traf1P39428 Gm25246-201ENSMUST00000175476 69 ntBASIC7.23□□□□□ -1.25
Traf1P39428 Gm31887-201ENSMUST00000197661 501 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Traf1P39428 Tsg101-ps-201ENSMUST00000201023 1170 ntBASIC7.23□□□□□ -1.25
Traf1P39428 Gm44091-201ENSMUST00000205212 649 ntBASIC7.23□□□□□ -1.25
Traf1P39428 BC024386-204ENSMUST00000209842 688 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Traf1P39428 Gm34574-201ENSMUST00000217795 1240 ntTSL 5 BASIC7.23□□□□□ -1.25
Traf1P39428 4930486F22Rik-201ENSMUST00000218077 559 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Traf1P39428 Smim15-202ENSMUST00000223808 808 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Traf1P39428 Mmp12-202ENSMUST00000065079 1185 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Traf1P39428 1700013H16Rik-201ENSMUST00000067940 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Traf1P39428 Vmn1r11-201ENSMUST00000071304 900 ntAPPRIS P2 BASIC7.23□□□□□ -1.25
Traf1P39428 Olfr726-201ENSMUST00000072370 966 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Traf1P39428 Gm8526-201ENSMUST00000079153 475 ntBASIC7.23□□□□□ -1.25
Traf1P39428 Bex6-201ENSMUST00000099990 764 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Traf1P39428 Ogdh-202ENSMUST00000081894 4114 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Traf1P39428 Lrrc3b-202ENSMUST00000163937 1424 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Traf1P39428 Ift80-201ENSMUST00000029347 3880 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Traf1P39428 Robo2-210ENSMUST00000226478 8059 ntBASIC7.23□□□□□ -1.25
Traf1P39428 Timd2-204ENSMUST00000169584 2926 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Traf1P39428 Tnik-206ENSMUST00000160518 3996 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
Traf1P39428 Csn2-206ENSMUST00000197422 1329 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
Traf1P39428 Gm29274-202ENSMUST00000188814 1498 ntTSL 5 BASIC7.23□□□□□ -1.25
Traf1P39428 Gm42676-201ENSMUST00000197609 2686 ntBASIC7.23□□□□□ -1.25
Traf1P39428 Trp53inp1-201ENSMUST00000029865 5404 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Traf1P39428 AC121997.2-201ENSMUST00000228095 2294 ntBASIC7.22□□□□□ -1.25
Traf1P39428 Prom1-208ENSMUST00000179059 3579 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
Traf1P39428 Nlrp1a-201ENSMUST00000048514 3903 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Traf1P39428 Abcc2-201ENSMUST00000026208 8027 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Traf1P39428 9330111N05Rik-201ENSMUST00000180409 1407 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Traf1P39428 Olfr726-207ENSMUST00000217319 1419 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Traf1P39428 Ube2u-201ENSMUST00000092730 1435 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Traf1P39428 Ube4a-201ENSMUST00000117506 6039 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Traf1P39428 Gm6884-201ENSMUST00000119318 615 ntBASIC7.22□□□□□ -1.25
Traf1P39428 Gm12890-201ENSMUST00000120885 373 ntBASIC7.22□□□□□ -1.25
Traf1P39428 Gm13024-201ENSMUST00000121756 718 ntBASIC7.22□□□□□ -1.25
Traf1P39428 Tctex1d1-203ENSMUST00000125417 859 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
Traf1P39428 Gm13291-201ENSMUST00000143527 655 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Traf1P39428 Rpl29-ps5-201ENSMUST00000164794 477 ntBASIC7.22□□□□□ -1.25
Traf1P39428 BC050972-202ENSMUST00000169153 467 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Traf1P39428 Vmn1r-ps46-201ENSMUST00000173862 949 ntBASIC7.22□□□□□ -1.25
Traf1P39428 Gm44370-201ENSMUST00000175436 112 ntBASIC7.22□□□□□ -1.25
Traf1P39428 Gm27240-201ENSMUST00000183616 677 ntTSL 3 BASIC7.22□□□□□ -1.25
Traf1P39428 Gm28934-201ENSMUST00000186491 346 ntBASIC7.22□□□□□ -1.25
Traf1P39428 Gm29529-201ENSMUST00000187154 714 ntTSL 3 BASIC7.22□□□□□ -1.25
Traf1P39428 1700124L16Rik-202ENSMUST00000189308 546 ntTSL 5 BASIC7.22□□□□□ -1.25
Traf1P39428 Gm29587-201ENSMUST00000189898 332 ntTSL 5 BASIC7.22□□□□□ -1.25
Traf1P39428 Gm18839-201ENSMUST00000204292 670 ntBASIC7.22□□□□□ -1.25
Traf1P39428 Gm39384-201ENSMUST00000213703 743 ntTSL 5 BASIC7.22□□□□□ -1.25
Traf1P39428 Gm35189-201ENSMUST00000219319 789 ntTSL 3 BASIC7.22□□□□□ -1.25
Traf1P39428 AC211878.6-201ENSMUST00000221896 358 ntBASIC7.22□□□□□ -1.25
Traf1P39428 Gm7557-201ENSMUST00000221935 865 ntBASIC7.22□□□□□ -1.25
Traf1P39428 AC120375.2-202ENSMUST00000228722 397 ntBASIC7.22□□□□□ -1.25
Traf1P39428 Defb42-201ENSMUST00000067990 618 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Traf1P39428 Spag17os-201ENSMUST00000137776 2437 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Traf1P39428 4921529L05Rik-201ENSMUST00000203047 1997 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Traf1P39428 Vmn1r34-207ENSMUST00000228647 2979 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
Traf1P39428 Vmn2r96-201ENSMUST00000165692 2343 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Traf1P39428 C030017G13Rik-201ENSMUST00000202959 2331 ntBASIC7.22□□□□□ -1.25
Traf1P39428 Olfr947-ps1-202ENSMUST00000214936 2168 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
Traf1P39428 Gm44045-201ENSMUST00000204906 2520 ntBASIC7.22□□□□□ -1.25
Traf1P39428 Gm9521-201ENSMUST00000206656 1516 ntBASIC7.22□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 81.3 ms