Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Gm4922-202ENSMUST00000216654 2357 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
P20040 5330409N07Rik-201ENSMUST00000222069 3518 ntBASIC5.43□□□□□ -1.54
P20040 Zscan4e-201ENSMUST00000166753 1722 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
P20040 Nxf7-202ENSMUST00000113163 2233 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
P20040 Olfr1036-201ENSMUST00000164985 3203 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
P20040 Rsrc2-203ENSMUST00000111515 4223 ntTSL 5 BASIC5.43□□□□□ -1.54
P20040 Kmt2d-202ENSMUST00000178486 19805 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
P20040 9330111N05Rik-201ENSMUST00000180409 1407 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
P20040 AC124516.3-201ENSMUST00000221302 3613 ntBASIC5.43□□□□□ -1.54
P20040 Pira2-201ENSMUST00000108615 3462 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
P20040 Gm15922-201ENSMUST00000118068 3462 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
P20040 Serpinb9-202ENSMUST00000063191 3472 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
P20040 Gm24272-201ENSMUST00000102329 98 ntBASIC5.43□□□□□ -1.54
P20040 Gm24989-201ENSMUST00000104461 88 ntBASIC5.43□□□□□ -1.54
P20040 Mup1-203ENSMUST00000107499 797 ntAPPRIS P3 TSL 2 BASIC5.43□□□□□ -1.54
P20040 Gm14356-201ENSMUST00000118322 869 ntBASIC5.43□□□□□ -1.54
P20040 Gm4234-201ENSMUST00000119747 714 ntBASIC5.43□□□□□ -1.54
P20040 Vmn1r239-ps-201ENSMUST00000127465 960 ntBASIC5.43□□□□□ -1.54
P20040 Gm14272-201ENSMUST00000133525 484 ntTSL 3 BASIC5.43□□□□□ -1.54
P20040 Gm16133-202ENSMUST00000160278 565 ntTSL 3 BASIC5.43□□□□□ -1.54
P20040 Gm15056-202ENSMUST00000167686 314 ntAPPRIS P2 TSL 5 BASIC5.43□□□□□ -1.54
P20040 Vmn1r-ps51-201ENSMUST00000175667 320 ntBASIC5.43□□□□□ -1.54
P20040 D630011A20Rik-201ENSMUST00000180858 500 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
P20040 Gm27193-201ENSMUST00000184217 586 ntBASIC5.43□□□□□ -1.54
P20040 Gm18700-201ENSMUST00000185791 553 ntBASIC5.43□□□□□ -1.54
P20040 Gm28078-201ENSMUST00000190381 874 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
P20040 Gm37974-201ENSMUST00000193668 220 ntTSL 3 BASIC5.43□□□□□ -1.54
P20040 Gm37477-201ENSMUST00000195215 884 ntBASIC5.43□□□□□ -1.54
P20040 Gm43838-201ENSMUST00000196357 348 ntTSL 3 BASIC5.43□□□□□ -1.54
P20040 Gm44105-201ENSMUST00000204401 308 ntTSL 5 BASIC5.43□□□□□ -1.54
P20040 Gm44163-201ENSMUST00000205140 475 ntBASIC5.43□□□□□ -1.54
P20040 4930567H12Rik-202ENSMUST00000212512 766 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
P20040 Amd-ps6-201ENSMUST00000214455 1003 ntBASIC5.43□□□□□ -1.54
P20040 AC153361.2-203ENSMUST00000218083 661 ntTSL 3 BASIC5.43□□□□□ -1.54
P20040 AC147782.1-201ENSMUST00000219169 475 ntBASIC5.43□□□□□ -1.54
P20040 AC091783.2-201ENSMUST00000224626 740 ntBASIC5.43□□□□□ -1.54
P20040 AC163631.1-201ENSMUST00000225041 598 ntBASIC5.43□□□□□ -1.54
P20040 CT010453.2-201ENSMUST00000227005 483 ntBASIC5.43□□□□□ -1.54
P20040 AC154757.2-201ENSMUST00000228885 743 ntBASIC5.43□□□□□ -1.54
P20040 Mcoln3-201ENSMUST00000039450 2991 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
P20040 Tsga13-201ENSMUST00000048580 1141 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
P20040 1700019A02Rik-201ENSMUST00000072235 646 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
P20040 Gm15732-201ENSMUST00000079794 480 ntBASIC5.43□□□□□ -1.54
P20040 Gm26442-201ENSMUST00000082588 153 ntBASIC5.43□□□□□ -1.54
P20040 Gm22351-201ENSMUST00000083925 107 ntBASIC5.43□□□□□ -1.54
P20040 Calcoco2-202ENSMUST00000097162 968 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
P20040 9430062P05Rik-201ENSMUST00000192703 3345 ntBASIC5.43□□□□□ -1.54
P20040 Qser1-201ENSMUST00000117237 8973 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
P20040 Gm36799-202ENSMUST00000215783 1634 ntTSL 5 BASIC5.43□□□□□ -1.54
P20040 Gm43088-201ENSMUST00000197530 2347 ntBASIC5.43□□□□□ -1.54
P20040 Olfr1385-202ENSMUST00000214948 4412 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
P20040 4930547M16Rik-201ENSMUST00000181590 2400 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
P20040 Vmn1r71-209ENSMUST00000228526 5137 ntAPPRIS P2 BASIC5.43□□□□□ -1.54
P20040 Cavin4-201ENSMUST00000030033 2054 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
P20040 Zfp871-201ENSMUST00000057501 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
P20040 Gm42531-201ENSMUST00000201648 4048 ntBASIC5.42□□□□□ -1.54
P20040 Cnga1-201ENSMUST00000087213 2739 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
P20040 Slc26a3-201ENSMUST00000001254 2908 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
P20040 Gm10648-201ENSMUST00000207552 2902 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
P20040 Cr2-202ENSMUST00000082321 6207 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
P20040 Gm17751-201ENSMUST00000189132 2004 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
P20040 Nuf2-202ENSMUST00000111368 2405 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
P20040 Gm25564-201ENSMUST00000104604 132 ntBASIC5.42□□□□□ -1.54
P20040 Gm12169-201ENSMUST00000109228 1065 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
P20040 Gm11271-201ENSMUST00000116054 440 ntBASIC5.42□□□□□ -1.54
P20040 Gm13455-201ENSMUST00000118767 517 ntBASIC5.42□□□□□ -1.54
P20040 Gm7212-201ENSMUST00000120817 348 ntBASIC5.42□□□□□ -1.54
P20040 Gm6977-201ENSMUST00000121568 512 ntBASIC5.42□□□□□ -1.54
P20040 Gm12438-201ENSMUST00000122034 336 ntBASIC5.42□□□□□ -1.54
P20040 Gm15503-201ENSMUST00000141541 449 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
P20040 Gm15275-201ENSMUST00000154752 347 ntBASIC5.42□□□□□ -1.54
P20040 Vmn1r-ps46-201ENSMUST00000173862 949 ntBASIC5.42□□□□□ -1.54
P20040 Gm27853-201ENSMUST00000184176 250 ntBASIC5.42□□□□□ -1.54
P20040 Gm29082-201ENSMUST00000185207 448 ntTSL 5 BASIC5.42□□□□□ -1.54
P20040 Gm29060-201ENSMUST00000185339 457 ntTSL 5 BASIC5.42□□□□□ -1.54
P20040 Gm28887-201ENSMUST00000186065 294 ntTSL 5 BASIC5.42□□□□□ -1.54
P20040 Gm28664-201ENSMUST00000186118 457 ntTSL 5 BASIC5.42□□□□□ -1.54
P20040 Gm28149-201ENSMUST00000187102 378 ntBASIC5.42□□□□□ -1.54
P20040 Gm29209-201ENSMUST00000188176 457 ntTSL 5 BASIC5.42□□□□□ -1.54
P20040 Gm29090-201ENSMUST00000188526 457 ntTSL 5 BASIC5.42□□□□□ -1.54
P20040 Gm28768-201ENSMUST00000189034 378 ntBASIC5.42□□□□□ -1.54
P20040 1700120G07Rik-202ENSMUST00000190881 885 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
P20040 Ighv1-45-201ENSMUST00000193677 352 ntBASIC5.42□□□□□ -1.54
P20040 Gm43354-201ENSMUST00000196862 346 ntBASIC5.42□□□□□ -1.54
P20040 Gm32754-201ENSMUST00000199442 257 ntTSL 5 BASIC5.42□□□□□ -1.54
P20040 Gm44538-201ENSMUST00000205615 348 ntBASIC5.42□□□□□ -1.54
P20040 Gm18805-201ENSMUST00000206872 655 ntBASIC5.42□□□□□ -1.54
P20040 Gm45044-201ENSMUST00000208078 396 ntTSL 5 BASIC5.42□□□□□ -1.54
P20040 Gm35453-201ENSMUST00000210304 331 ntTSL 3 BASIC5.42□□□□□ -1.54
P20040 Olfr562-ps1-201ENSMUST00000210779 951 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
P20040 CT485607.3-201ENSMUST00000213361 672 ntBASIC5.42□□□□□ -1.54
P20040 Gm18103-201ENSMUST00000216621 779 ntBASIC5.42□□□□□ -1.54
P20040 Gm30933-201ENSMUST00000217174 381 ntTSL 2 BASIC5.42□□□□□ -1.54
P20040 Gm19116-201ENSMUST00000218592 642 ntBASIC5.42□□□□□ -1.54
P20040 Gm3785-201ENSMUST00000221000 202 ntBASIC5.42□□□□□ -1.54
P20040 AC129597.1-201ENSMUST00000223046 1234 ntBASIC5.42□□□□□ -1.54
P20040 CT030195.1-201ENSMUST00000223887 378 ntBASIC5.42□□□□□ -1.54
P20040 AC154250.1-201ENSMUST00000224775 489 ntBASIC5.42□□□□□ -1.54
P20040 Olfr564-201ENSMUST00000061096 951 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
P20040 Vmn1r50-201ENSMUST00000081706 933 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms