Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm28258-201ENSMUST00000189033 587 ntTSL 3 BASIC6.17□□□□□ -1.42
Lire1P11260 Gm29363-201ENSMUST00000189365 621 ntTSL 5 BASIC6.17□□□□□ -1.42
Lire1P11260 Gm37620-201ENSMUST00000192910 501 ntBASIC6.17□□□□□ -1.42
Lire1P11260 Gm3143-201ENSMUST00000196308 580 ntTSL 3 BASIC6.17□□□□□ -1.42
Lire1P11260 Gm4751-201ENSMUST00000200620 1105 ntBASIC6.17□□□□□ -1.42
Lire1P11260 Gm7452-201ENSMUST00000200764 788 ntBASIC6.17□□□□□ -1.42
Lire1P11260 Mir670hg-207ENSMUST00000211619 819 ntTSL 5 BASIC6.17□□□□□ -1.42
Lire1P11260 Olfr1134-203ENSMUST00000213939 1015 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Lire1P11260 Serpina3a-201ENSMUST00000021496 1269 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Lire1P11260 CAAA01216754.4-201ENSMUST00000216416 802 ntTSL 5 BASIC6.17□□□□□ -1.42
Lire1P11260 4930545H06Rik-201ENSMUST00000218225 763 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Lire1P11260 AC163684.1-201ENSMUST00000223766 927 ntBASIC6.17□□□□□ -1.42
Lire1P11260 Snrpd1-201ENSMUST00000002551 837 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Lire1P11260 Olfr1323-201ENSMUST00000057071 930 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Lire1P11260 Platr26-201ENSMUST00000079720 641 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Lire1P11260 Olfr18-201ENSMUST00000086473 1156 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Lire1P11260 Gm29486-201ENSMUST00000088648 372 ntBASIC6.17□□□□□ -1.42
Lire1P11260 Slx-201ENSMUST00000096913 925 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Lire1P11260 Olfr1312-201ENSMUST00000099600 954 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Lire1P11260 Akt3-202ENSMUST00000111159 4906 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Lire1P11260 Mbd3l2-201ENSMUST00000051008 2075 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Lire1P11260 AC152944.1-201ENSMUST00000220160 3101 ntBASIC6.17□□□□□ -1.42
Lire1P11260 Nostrin-201ENSMUST00000041865 1808 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Lire1P11260 AC164092.3-201ENSMUST00000216970 1323 ntBASIC6.17□□□□□ -1.42
Lire1P11260 Gm3512-202ENSMUST00000172431 1861 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Lire1P11260 Dleu2-207ENSMUST00000182756 3530 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Lire1P11260 Creb5-203ENSMUST00000203528 7917 ntAPPRIS P2 TSL 5 BASIC6.17□□□□□ -1.42
Lire1P11260 Slamf7-202ENSMUST00000192024 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Lire1P11260 AC155167.2-201ENSMUST00000226127 1945 ntBASIC6.17□□□□□ -1.42
Lire1P11260 Olfr183-203ENSMUST00000213465 2200 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Lire1P11260 Olfr183-205ENSMUST00000214916 2249 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Lire1P11260 Gm45183-201ENSMUST00000207937 1497 ntBASIC6.16□□□□□ -1.42
Lire1P11260 Zc4h2-202ENSMUST00000119640 2075 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Lire1P11260 Gm3106-201ENSMUST00000179743 2383 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Lire1P11260 Bnip3l-202ENSMUST00000111115 3259 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Lire1P11260 Kcnma1-201ENSMUST00000065788 4524 ntTSL 5 BASIC6.16□□□□□ -1.42
Lire1P11260 Gm45073-201ENSMUST00000207688 4247 ntBASIC6.16□□□□□ -1.42
Lire1P11260 Atf2-206ENSMUST00000112016 3943 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Lire1P11260 Gm3259-202ENSMUST00000160045 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Lire1P11260 C87414-201ENSMUST00000076321 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Lire1P11260 Gm43891-201ENSMUST00000205132 3112 ntBASIC6.16□□□□□ -1.42
Lire1P11260 Vmn1r6-202ENSMUST00000226689 8453 ntAPPRIS P2 BASIC6.16□□□□□ -1.42
Lire1P11260 AC124680.1-201ENSMUST00000223923 1585 ntBASIC6.16□□□□□ -1.42
Lire1P11260 Gm22256-201ENSMUST00000102291 107 ntBASIC6.16□□□□□ -1.42
Lire1P11260 Gm20730-201ENSMUST00000103301 359 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Lire1P11260 Apoa2-203ENSMUST00000111320 470 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
Lire1P11260 Amelx-202ENSMUST00000112118 799 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Lire1P11260 Eif3s6-ps1-201ENSMUST00000117907 470 ntBASIC6.16□□□□□ -1.42
Lire1P11260 Gm14741-201ENSMUST00000120777 1009 ntBASIC6.16□□□□□ -1.42
Lire1P11260 Gm12288-201ENSMUST00000121054 1282 ntBASIC6.16□□□□□ -1.42
Lire1P11260 Gm16098-201ENSMUST00000141926 796 ntTSL 2 BASIC6.16□□□□□ -1.42
Lire1P11260 Gm12600-201ENSMUST00000146704 708 ntTSL 3 BASIC6.16□□□□□ -1.42
Lire1P11260 Gm15239-201ENSMUST00000150690 603 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Lire1P11260 Gm25962-201ENSMUST00000157173 168 ntBASIC6.16□□□□□ -1.42
Lire1P11260 Gm10177-201ENSMUST00000160052 444 ntBASIC6.16□□□□□ -1.42
Lire1P11260 Gm16006-201ENSMUST00000160938 566 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Lire1P11260 Six3os1-204ENSMUST00000161688 567 ntTSL 3 BASIC6.16□□□□□ -1.42
Lire1P11260 Gm22857-201ENSMUST00000174969 134 ntBASIC6.16□□□□□ -1.42
Lire1P11260 Pantr1-203ENSMUST00000176154 514 ntTSL 5 BASIC6.16□□□□□ -1.42
Lire1P11260 Gm2888-202ENSMUST00000178577 618 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Lire1P11260 Vmn1r227-202ENSMUST00000179914 1026 ntBASIC6.16□□□□□ -1.42
Lire1P11260 Gm21877-201ENSMUST00000185640 694 ntBASIC6.16□□□□□ -1.42
Lire1P11260 Gm28883-201ENSMUST00000189256 369 ntBASIC6.16□□□□□ -1.42
Lire1P11260 Gm29206-201ENSMUST00000189321 827 ntTSL 5 BASIC6.16□□□□□ -1.42
Lire1P11260 Gm18183-201ENSMUST00000191024 615 ntBASIC6.16□□□□□ -1.42
Lire1P11260 Gm28425-202ENSMUST00000191542 621 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Lire1P11260 Gm37328-201ENSMUST00000193191 640 ntBASIC6.16□□□□□ -1.42
Lire1P11260 Ighv1-14-201ENSMUST00000194015 402 ntBASIC6.16□□□□□ -1.42
Lire1P11260 Gm43044-201ENSMUST00000198091 379 ntBASIC6.16□□□□□ -1.42
Lire1P11260 Gm43599-201ENSMUST00000202680 528 ntTSL 2 BASIC6.16□□□□□ -1.42
Lire1P11260 Gm44411-201ENSMUST00000204172 349 ntBASIC6.16□□□□□ -1.42
Lire1P11260 Gm45279-201ENSMUST00000210315 391 ntBASIC6.16□□□□□ -1.42
Lire1P11260 Aldoa-ps4-201ENSMUST00000216332 753 ntBASIC6.16□□□□□ -1.42
Lire1P11260 Gm32105-201ENSMUST00000218512 511 ntTSL 5 BASIC6.16□□□□□ -1.42
Lire1P11260 Mylf-ps-201ENSMUST00000222174 421 ntBASIC6.16□□□□□ -1.42
Lire1P11260 Gm4808-201ENSMUST00000222283 1203 ntBASIC6.16□□□□□ -1.42
Lire1P11260 Gm9267-201ENSMUST00000222831 404 ntBASIC6.16□□□□□ -1.42
Lire1P11260 Dusp21-201ENSMUST00000026018 845 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Lire1P11260 Gm24405-201ENSMUST00000083033 167 ntBASIC6.16□□□□□ -1.42
Lire1P11260 Olfr606-201ENSMUST00000098200 960 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Lire1P11260 Pter-203ENSMUST00000134794 3571 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Lire1P11260 Gm37049-201ENSMUST00000194356 1983 ntBASIC6.16□□□□□ -1.42
Lire1P11260 Fanci-201ENSMUST00000036865 4645 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Lire1P11260 Itih4-201ENSMUST00000006703 2980 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Lire1P11260 AC132465.1-201ENSMUST00000219938 1307 ntBASIC6.16□□□□□ -1.42
Lire1P11260 Zfp352-201ENSMUST00000080541 1656 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Lire1P11260 Rgs17-204ENSMUST00000131996 8107 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Lire1P11260 D630023O14Rik-201ENSMUST00000191913 3099 ntBASIC6.16□□□□□ -1.42
Lire1P11260 Arhgef38-202ENSMUST00000147041 6541 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Lire1P11260 Cr2-202ENSMUST00000082321 6207 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Lire1P11260 Rpgr-201ENSMUST00000044598 3805 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Lire1P11260 Gm43162-201ENSMUST00000198292 1770 ntBASIC6.16□□□□□ -1.42
Lire1P11260 Gm12388-201ENSMUST00000119112 1887 ntBASIC6.15□□□□□ -1.42
Lire1P11260 Pirt-201ENSMUST00000123434 4200 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Lire1P11260 Celf2-201ENSMUST00000002176 7718 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
Lire1P11260 Gm10165-201ENSMUST00000217666 2380 ntTSL 2 BASIC6.15□□□□□ -1.42
Lire1P11260 AC132852.2-201ENSMUST00000216052 2794 ntBASIC6.15□□□□□ -1.42
Lire1P11260 Olfr1417-203ENSMUST00000214887 3582 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Lire1P11260 Gm21269-201ENSMUST00000206521 12456 ntTSL 3 BASIC6.15□□□□□ -1.42
Lire1P11260 Gm18493-201ENSMUST00000192084 1612 ntBASIC6.15□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms