Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 Gm13024-201ENSMUST00000121756 718 ntBASIC6.35□□□□□ -1.39
Cldn5O54942 Gm4764-201ENSMUST00000130207 1233 ntBASIC6.35□□□□□ -1.39
Cldn5O54942 Gm14349-201ENSMUST00000137155 902 ntBASIC6.35□□□□□ -1.39
Cldn5O54942 Gm15634-201ENSMUST00000147206 492 ntTSL 3 BASIC6.35□□□□□ -1.39
Cldn5O54942 Gm23050-201ENSMUST00000158775 165 ntBASIC6.35□□□□□ -1.39
Cldn5O54942 Gm44370-201ENSMUST00000175436 112 ntBASIC6.35□□□□□ -1.39
Cldn5O54942 Lsm5-203ENSMUST00000176595 274 ntTSL 5 BASIC6.35□□□□□ -1.39
Cldn5O54942 Gm26057-201ENSMUST00000178099 165 ntBASIC6.35□□□□□ -1.39
Cldn5O54942 Gm3650-201ENSMUST00000180600 747 ntBASIC6.35□□□□□ -1.39
Cldn5O54942 Gm2042-202ENSMUST00000180706 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Cldn5O54942 Mir6992-201ENSMUST00000183342 109 ntBASIC6.35□□□□□ -1.39
Cldn5O54942 Gm27468-201ENSMUST00000183577 106 ntBASIC6.35□□□□□ -1.39
Cldn5O54942 Gm5692-201ENSMUST00000187254 1057 ntBASIC6.35□□□□□ -1.39
Cldn5O54942 Gm38097-201ENSMUST00000192936 439 ntBASIC6.35□□□□□ -1.39
Cldn5O54942 4930512P04Rik-201ENSMUST00000197000 424 ntBASIC6.35□□□□□ -1.39
Cldn5O54942 Gm45479-201ENSMUST00000211613 802 ntTSL 3 BASIC6.35□□□□□ -1.39
Cldn5O54942 Gm45850-201ENSMUST00000212536 338 ntBASIC6.35□□□□□ -1.39
Cldn5O54942 AC165256.1-201ENSMUST00000216687 670 ntTSL 2 BASIC6.35□□□□□ -1.39
Cldn5O54942 CT010431.1-201ENSMUST00000221249 1080 ntBASIC6.35□□□□□ -1.39
Cldn5O54942 AC163664.2-201ENSMUST00000228894 459 ntBASIC6.35□□□□□ -1.39
Cldn5O54942 4930519F16Rik-201ENSMUST00000033688 1113 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Cldn5O54942 Scgb2b24-201ENSMUST00000055444 523 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Cldn5O54942 1700013H16Rik-201ENSMUST00000067940 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Cldn5O54942 Gm22126-201ENSMUST00000083244 142 ntBASIC6.35□□□□□ -1.39
Cldn5O54942 Gm10221-201ENSMUST00000088299 309 ntBASIC6.35□□□□□ -1.39
Cldn5O54942 Cldn34b3-201ENSMUST00000096389 1077 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Cldn5O54942 Olfr657-201ENSMUST00000098171 960 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Cldn5O54942 Gm3629-201ENSMUST00000171706 1756 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Cldn5O54942 Acsm2-207ENSMUST00000167935 6738 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Cldn5O54942 Zfp60-201ENSMUST00000042641 2727 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Cldn5O54942 B3gnt5-203ENSMUST00000121344 4175 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Cldn5O54942 Olfr259-203ENSMUST00000215828 4095 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Cldn5O54942 Il21-201ENSMUST00000029273 3072 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
Cldn5O54942 Olfr508-201ENSMUST00000072914 1635 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Cldn5O54942 Ctage5-202ENSMUST00000069430 2869 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Cldn5O54942 Cxcr6-202ENSMUST00000216072 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Cldn5O54942 Eif2s3x-201ENSMUST00000050328 3647 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Cldn5O54942 Sgms1-209ENSMUST00000142618 4036 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Cldn5O54942 Prrg1-201ENSMUST00000114024 3900 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
Cldn5O54942 Atp13a5-203ENSMUST00000143373 3789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Cldn5O54942 Dock7-205ENSMUST00000127417 6796 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
Cldn5O54942 Prox1-202ENSMUST00000175916 7913 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Cldn5O54942 Nr3c1-204ENSMUST00000115571 6327 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Cldn5O54942 Serpinb6c-202ENSMUST00000172184 1327 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Cldn5O54942 Cnga1-202ENSMUST00000126799 2061 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Cldn5O54942 Nsun6-203ENSMUST00000114713 2420 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Cldn5O54942 Lum-201ENSMUST00000038160 2448 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Cldn5O54942 4930519E07Rik-201ENSMUST00000200907 1665 ntBASIC6.34□□□□□ -1.39
Cldn5O54942 Skint8-201ENSMUST00000106572 1290 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
Cldn5O54942 Gm11485-201ENSMUST00000120048 1175 ntBASIC6.34□□□□□ -1.39
Cldn5O54942 Platr28-201ENSMUST00000133824 1294 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Cldn5O54942 S100a2-201ENSMUST00000179550 315 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Cldn5O54942 Gm27004-201ENSMUST00000183300 727 ntBASIC6.34□□□□□ -1.39
Cldn5O54942 Gm27460-201ENSMUST00000184213 100 ntBASIC6.34□□□□□ -1.39
Cldn5O54942 Gm28973-201ENSMUST00000189310 613 ntBASIC6.34□□□□□ -1.39
Cldn5O54942 Gm34768-201ENSMUST00000193884 565 ntBASIC6.34□□□□□ -1.39
Cldn5O54942 A330069K06Rik-201ENSMUST00000194077 917 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Cldn5O54942 Trav3n-2-201ENSMUST00000197693 334 ntBASIC6.34□□□□□ -1.39
Cldn5O54942 Trav3d-2-201ENSMUST00000199874 334 ntBASIC6.34□□□□□ -1.39
Cldn5O54942 Gm44243-201ENSMUST00000204323 692 ntBASIC6.34□□□□□ -1.39
Cldn5O54942 Gm44940-201ENSMUST00000206225 1247 ntBASIC6.34□□□□□ -1.39
Cldn5O54942 AC118476.1-201ENSMUST00000216237 349 ntTSL 3 BASIC6.34□□□□□ -1.39
Cldn5O54942 AC079680.1-201ENSMUST00000218730 649 ntTSL 5 BASIC6.34□□□□□ -1.39
Cldn5O54942 AC211878.5-201ENSMUST00000221697 409 ntBASIC6.34□□□□□ -1.39
Cldn5O54942 Gm40653-202ENSMUST00000222122 1155 ntTSL 5 BASIC6.34□□□□□ -1.39
Cldn5O54942 Gm36262-201ENSMUST00000223274 499 ntBASIC6.34□□□□□ -1.39
Cldn5O54942 Gm5229-201ENSMUST00000039375 354 ntBASIC6.34□□□□□ -1.39
Cldn5O54942 Olfr250-201ENSMUST00000052085 996 ntAPPRIS P2 BASIC6.34□□□□□ -1.39
Cldn5O54942 Gm5612-201ENSMUST00000053326 375 ntBASIC6.34□□□□□ -1.39
Cldn5O54942 Olfr597-201ENSMUST00000098203 948 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Cldn5O54942 Pdzph1-201ENSMUST00000025064 4174 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Cldn5O54942 Zranb3-203ENSMUST00000112538 4741 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Cldn5O54942 Cep57l1-204ENSMUST00000186239 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Cldn5O54942 Olfr1500-207ENSMUST00000219674 2287 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Cldn5O54942 Ttc41-202ENSMUST00000075632 4366 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Cldn5O54942 Gm19272-202ENSMUST00000185181 2217 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Cldn5O54942 Vmn1r220-204ENSMUST00000227950 6238 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Cldn5O54942 2700049A03Rik-201ENSMUST00000045907 4507 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Cldn5O54942 A930006L05Rik-201ENSMUST00000186821 2814 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
Cldn5O54942 AL607131.1-201ENSMUST00000222575 1835 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
Cldn5O54942 Lig4-202ENSMUST00000170033 3105 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
Cldn5O54942 Stk32a-201ENSMUST00000045477 3765 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
Cldn5O54942 BC080695-202ENSMUST00000105774 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
Cldn5O54942 AC158595.1-201ENSMUST00000217989 1435 ntBASIC6.33□□□□□ -1.4
Cldn5O54942 Gm43842-201ENSMUST00000202890 2982 ntBASIC6.33□□□□□ -1.4
Cldn5O54942 Gm45516-201ENSMUST00000211588 4182 ntBASIC6.33□□□□□ -1.4
Cldn5O54942 Gm37100-201ENSMUST00000193344 1353 ntBASIC6.33□□□□□ -1.4
Cldn5O54942 AC155243.1-201ENSMUST00000220141 2262 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Cldn5O54942 Dcx-201ENSMUST00000033642 9074 ntAPPRIS ALT1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Cldn5O54942 Dock2-202ENSMUST00000101364 1616 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Cldn5O54942 Colec10-201ENSMUST00000036737 4587 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Cldn5O54942 Pramel7-201ENSMUST00000026957 1861 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Cldn5O54942 Bnip3l-202ENSMUST00000111115 3259 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Cldn5O54942 Olfr1381-202ENSMUST00000213256 4954 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Cldn5O54942 Ighv1-64-201ENSMUST00000103535 405 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Cldn5O54942 Mup6-202ENSMUST00000107520 540 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Cldn5O54942 Gng2-ps1-201ENSMUST00000120523 217 ntBASIC6.33□□□□□ -1.4
Cldn5O54942 Rhox3b-ps-201ENSMUST00000121045 868 ntBASIC6.33□□□□□ -1.4
Cldn5O54942 Gm22518-201ENSMUST00000158267 68 ntBASIC6.33□□□□□ -1.4
Cldn5O54942 B230118H07Rik-209ENSMUST00000160722 931 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 123.2 ms