Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Rnu11-201ENSMUST00000104135 134 ntBASIC4.88□□□□□ -1.63
Hmgb3O54879 Lrrc51-205ENSMUST00000106965 743 ntTSL 3 BASIC4.88□□□□□ -1.63
Hmgb3O54879 Homer1-209ENSMUST00000109496 772 ntTSL 5 BASIC4.88□□□□□ -1.63
Hmgb3O54879 Gin1-202ENSMUST00000112842 1037 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Hmgb3O54879 Rpl7a-ps9-201ENSMUST00000117118 777 ntBASIC4.88□□□□□ -1.63
Hmgb3O54879 Gm13455-201ENSMUST00000118767 517 ntBASIC4.88□□□□□ -1.63
Hmgb3O54879 Gm5601-201ENSMUST00000118909 972 ntBASIC4.88□□□□□ -1.63
Hmgb3O54879 Gm22025-201ENSMUST00000122734 302 ntBASIC4.88□□□□□ -1.63
Hmgb3O54879 Gm13465-201ENSMUST00000129687 979 ntTSL 2 BASIC4.88□□□□□ -1.63
Hmgb3O54879 Gm11368-201ENSMUST00000139576 609 ntTSL 3 BASIC4.88□□□□□ -1.63
Hmgb3O54879 Ttc39aos1-201ENSMUST00000150239 796 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Hmgb3O54879 Lrrc51-210ENSMUST00000163903 939 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Hmgb3O54879 Gm5861-201ENSMUST00000168407 1016 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
Hmgb3O54879 Gm7393-201ENSMUST00000172650 739 ntBASIC4.88□□□□□ -1.63
Hmgb3O54879 Vmn2r-ps37-201ENSMUST00000174682 1044 ntBASIC4.88□□□□□ -1.63
Hmgb3O54879 Gm27295-201ENSMUST00000184264 153 ntBASIC4.88□□□□□ -1.63
Hmgb3O54879 Ly6a-203ENSMUST00000187171 853 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Hmgb3O54879 Gm29605-201ENSMUST00000190800 292 ntBASIC4.88□□□□□ -1.63
Hmgb3O54879 Gm4785-201ENSMUST00000191025 751 ntBASIC4.88□□□□□ -1.63
Hmgb3O54879 1700034J04Rik-201ENSMUST00000192736 750 ntBASIC4.88□□□□□ -1.63
Hmgb3O54879 Gm8869-201ENSMUST00000195222 947 ntBASIC4.88□□□□□ -1.63
Hmgb3O54879 Gm5306-201ENSMUST00000203325 757 ntBASIC4.88□□□□□ -1.63
Hmgb3O54879 Pde6h-203ENSMUST00000204382 211 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Hmgb3O54879 Gm44036-201ENSMUST00000204551 336 ntTSL 3 BASIC4.88□□□□□ -1.63
Hmgb3O54879 Gm44199-201ENSMUST00000205219 739 ntTSL 3 BASIC4.88□□□□□ -1.63
Hmgb3O54879 Gm29759-201ENSMUST00000205860 327 ntBASIC4.88□□□□□ -1.63
Hmgb3O54879 Gm44707-201ENSMUST00000206293 1216 ntTSL 5 BASIC4.88□□□□□ -1.63
Hmgb3O54879 Gm45628-201ENSMUST00000210849 274 ntBASIC4.88□□□□□ -1.63
Hmgb3O54879 Stx3-206ENSMUST00000211047 870 ntTSL 5 BASIC4.88□□□□□ -1.63
Hmgb3O54879 CT485607.3-201ENSMUST00000213361 672 ntBASIC4.88□□□□□ -1.63
Hmgb3O54879 Gm1715-201ENSMUST00000213681 1018 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Hmgb3O54879 Rpl17-ps6-201ENSMUST00000222192 532 ntBASIC4.88□□□□□ -1.63
Hmgb3O54879 AC105407.1-201ENSMUST00000225684 614 ntBASIC4.88□□□□□ -1.63
Hmgb3O54879 AC154692.1-202ENSMUST00000226632 1231 ntBASIC4.88□□□□□ -1.63
Hmgb3O54879 AC118250.1-201ENSMUST00000228569 875 ntBASIC4.88□□□□□ -1.63
Hmgb3O54879 Gm5160-201ENSMUST00000069552 444 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Hmgb3O54879 Defa37-201ENSMUST00000084040 403 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Hmgb3O54879 Gm15337-201ENSMUST00000135378 3888 ntTSL 5 BASIC4.88□□□□□ -1.63
Hmgb3O54879 Gm26789-201ENSMUST00000181342 2502 ntTSL 5 BASIC4.88□□□□□ -1.63
Hmgb3O54879 Eps8-202ENSMUST00000100841 4151 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Hmgb3O54879 Gm14418-201ENSMUST00000108955 1415 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Hmgb3O54879 Ccar1-201ENSMUST00000020268 4352 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Hmgb3O54879 AC116797.1-201ENSMUST00000223988 3955 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Hmgb3O54879 Olfr1120-202ENSMUST00000215163 4404 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
Hmgb3O54879 Fat3-201ENSMUST00000082170 18456 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Hmgb3O54879 Wdr17-202ENSMUST00000127511 4668 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
Hmgb3O54879 Serpinb11-201ENSMUST00000027566 2084 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Hmgb3O54879 Zscan4e-201ENSMUST00000166753 1722 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Hmgb3O54879 Olfr461-202ENSMUST00000215009 4292 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Hmgb3O54879 G930045G22Rik-201ENSMUST00000101402 480 ntTSL 5 BASIC4.87□□□□□ -1.63
Hmgb3O54879 Olfr1293-ps-201ENSMUST00000102551 888 ntAPPRIS ALT2 BASIC4.87□□□□□ -1.63
Hmgb3O54879 Gm22103-201ENSMUST00000116733 121 ntBASIC4.87□□□□□ -1.63
Hmgb3O54879 Gm26475-201ENSMUST00000116769 121 ntBASIC4.87□□□□□ -1.63
Hmgb3O54879 Gm23620-201ENSMUST00000116812 121 ntBASIC4.87□□□□□ -1.63
Hmgb3O54879 Gm25042-201ENSMUST00000116856 121 ntBASIC4.87□□□□□ -1.63
Hmgb3O54879 Gm25540-201ENSMUST00000116880 121 ntBASIC4.87□□□□□ -1.63
Hmgb3O54879 Gm14173-201ENSMUST00000117690 278 ntBASIC4.87□□□□□ -1.63
Hmgb3O54879 Gm11858-201ENSMUST00000117935 838 ntBASIC4.87□□□□□ -1.63
Hmgb3O54879 Gm6620-201ENSMUST00000120113 715 ntBASIC4.87□□□□□ -1.63
Hmgb3O54879 Gm15842-201ENSMUST00000120513 618 ntBASIC4.87□□□□□ -1.63
Hmgb3O54879 Gm12066-201ENSMUST00000123592 443 ntTSL 3 BASIC4.87□□□□□ -1.63
Hmgb3O54879 Gm15991-201ENSMUST00000127631 942 ntTSL 5 BASIC4.87□□□□□ -1.63
Hmgb3O54879 Gm11423-201ENSMUST00000136051 655 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Hmgb3O54879 Gm15527-201ENSMUST00000138259 858 ntTSL 3 BASIC4.87□□□□□ -1.63
Hmgb3O54879 Gm13166-203ENSMUST00000144166 326 ntTSL 3 BASIC4.87□□□□□ -1.63
Hmgb3O54879 Gm11816-202ENSMUST00000149848 714 ntTSL 2 BASIC4.87□□□□□ -1.63
Hmgb3O54879 Gm16062-201ENSMUST00000151825 771 ntTSL 2 BASIC4.87□□□□□ -1.63
Hmgb3O54879 Mir1945-201ENSMUST00000157919 78 ntBASIC4.87□□□□□ -1.63
Hmgb3O54879 Gm24363-201ENSMUST00000158440 311 ntBASIC4.87□□□□□ -1.63
Hmgb3O54879 Vmn1r176-201ENSMUST00000171073 915 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Hmgb3O54879 Gm23550-201ENSMUST00000179003 121 ntBASIC4.87□□□□□ -1.63
Hmgb3O54879 Gm25123-201ENSMUST00000179154 121 ntBASIC4.87□□□□□ -1.63
Hmgb3O54879 Gm25353-201ENSMUST00000179366 121 ntBASIC4.87□□□□□ -1.63
Hmgb3O54879 Gm22992-201ENSMUST00000179496 121 ntBASIC4.87□□□□□ -1.63
Hmgb3O54879 Gm25892-201ENSMUST00000179867 121 ntBASIC4.87□□□□□ -1.63
Hmgb3O54879 Gm24092-201ENSMUST00000180257 121 ntBASIC4.87□□□□□ -1.63
Hmgb3O54879 4930532G15Rik-201ENSMUST00000180632 699 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Hmgb3O54879 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Hmgb3O54879 Gm17895-201ENSMUST00000194028 874 ntBASIC4.87□□□□□ -1.63
Hmgb3O54879 Gm38343-201ENSMUST00000195786 1060 ntTSL 5 BASIC4.87□□□□□ -1.63
Hmgb3O54879 Rpl9-ps8-201ENSMUST00000198343 562 ntBASIC4.87□□□□□ -1.63
Hmgb3O54879 Gm43241-201ENSMUST00000198375 364 ntTSL 3 BASIC4.87□□□□□ -1.63
Hmgb3O54879 Gm44463-201ENSMUST00000198895 137 ntBASIC4.87□□□□□ -1.63
Hmgb3O54879 Gm30735-201ENSMUST00000199488 726 ntTSL 3 BASIC4.87□□□□□ -1.63
Hmgb3O54879 Gm42640-201ENSMUST00000199792 1195 ntBASIC4.87□□□□□ -1.63
Hmgb3O54879 Gm16571-202ENSMUST00000203839 585 ntTSL 5 BASIC4.87□□□□□ -1.63
Hmgb3O54879 Gm39119-201ENSMUST00000208466 951 ntTSL 5 BASIC4.87□□□□□ -1.63
Hmgb3O54879 Gm35520-201ENSMUST00000209235 784 ntTSL 5 BASIC4.87□□□□□ -1.63
Hmgb3O54879 Gm34623-201ENSMUST00000210900 977 ntTSL 5 BASIC4.87□□□□□ -1.63
Hmgb3O54879 Gm45725-201ENSMUST00000212962 337 ntBASIC4.87□□□□□ -1.63
Hmgb3O54879 AC122428.4-201ENSMUST00000213494 589 ntTSL 3 BASIC4.87□□□□□ -1.63
Hmgb3O54879 Gm33467-201ENSMUST00000221885 652 ntTSL 3 BASIC4.87□□□□□ -1.63
Hmgb3O54879 AC073562.1-201ENSMUST00000222117 401 ntBASIC4.87□□□□□ -1.63
Hmgb3O54879 Olfr732-201ENSMUST00000071208 1044 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Hmgb3O54879 Mrpl42-201ENSMUST00000075829 666 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Hmgb3O54879 Gm10197-201ENSMUST00000086887 201 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Hmgb3O54879 Larp1b-204ENSMUST00000099121 1030 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Hmgb3O54879 Anapc10-201ENSMUST00000048147 2801 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Hmgb3O54879 Ceacam12-202ENSMUST00000108483 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Hmgb3O54879 Ankrd66-201ENSMUST00000178772 1321 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 87.7 ms