Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Cep55-201ENSMUST00000096096 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Srp54bE9PXC0 Olfr10-202ENSMUST00000217290 2776 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Srp54bE9PXC0 Vmn1r34-207ENSMUST00000228647 2979 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Srp54bE9PXC0 Olfr97-205ENSMUST00000214848 1861 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Srp54bE9PXC0 Gm43682-201ENSMUST00000202150 2090 ntBASIC6.19□□□□□ -1.42
Srp54bE9PXC0 Zfp87-204ENSMUST00000181767 2656 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Srp54bE9PXC0 Dclre1c-204ENSMUST00000115066 3828 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Srp54bE9PXC0 Smim15-201ENSMUST00000095458 1918 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Srp54bE9PXC0 Cyld-206ENSMUST00000209559 4476 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
Srp54bE9PXC0 Ogdh-202ENSMUST00000081894 4114 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Srp54bE9PXC0 Pja2-201ENSMUST00000024888 4531 ntAPPRIS P4 TSL 5 BASIC6.18□□□□□ -1.42
Srp54bE9PXC0 Fam227b-204ENSMUST00000178118 1599 ntAPPRIS P2 TSL 5 BASIC6.18□□□□□ -1.42
Srp54bE9PXC0 Olfr947-ps1-202ENSMUST00000214936 2168 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
Srp54bE9PXC0 Gm15328-201ENSMUST00000144006 2977 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Srp54bE9PXC0 Tmprss15-201ENSMUST00000023566 4177 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
Srp54bE9PXC0 Ikzf2-201ENSMUST00000027146 9278 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Srp54bE9PXC0 Olfr350-202ENSMUST00000214457 2022 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Srp54bE9PXC0 Trim24-202ENSMUST00000120238 3258 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Srp54bE9PXC0 Zc2hc1a-201ENSMUST00000051064 3292 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Srp54bE9PXC0 Homer1-203ENSMUST00000080127 3052 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Srp54bE9PXC0 Shprh-201ENSMUST00000044053 9271 ntAPPRIS P4 TSL 1 (best) BASIC6.18□□□□□ -1.42
Srp54bE9PXC0 Igkv6-23-201ENSMUST00000103386 369 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Srp54bE9PXC0 Klra7-204ENSMUST00000112013 1104 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Srp54bE9PXC0 4933411O13Rik-203ENSMUST00000146849 607 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Srp54bE9PXC0 Gm24179-201ENSMUST00000158925 127 ntBASIC6.18□□□□□ -1.42
Srp54bE9PXC0 Gm3076-201ENSMUST00000161613 451 ntBASIC6.18□□□□□ -1.42
Srp54bE9PXC0 Sptssb-202ENSMUST00000171529 772 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Srp54bE9PXC0 Spint4-201ENSMUST00000017454 751 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Srp54bE9PXC0 Rpl31-ps16-201ENSMUST00000181130 376 ntBASIC6.18□□□□□ -1.42
Srp54bE9PXC0 Mlip-214ENSMUST00000185039 1295 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Srp54bE9PXC0 4933404I11Rik-201ENSMUST00000190294 1202 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Srp54bE9PXC0 Gm37491-201ENSMUST00000192552 1111 ntBASIC6.18□□□□□ -1.42
Srp54bE9PXC0 Gm44360-201ENSMUST00000200081 82 ntBASIC6.18□□□□□ -1.42
Srp54bE9PXC0 Gm44930-201ENSMUST00000207545 489 ntTSL 5 BASIC6.18□□□□□ -1.42
Srp54bE9PXC0 Gm33619-201ENSMUST00000215633 662 ntTSL 2 BASIC6.18□□□□□ -1.42
Srp54bE9PXC0 AC154808.1-201ENSMUST00000223156 730 ntTSL 5 BASIC6.18□□□□□ -1.42
Srp54bE9PXC0 AC154634.3-201ENSMUST00000224589 736 ntBASIC6.18□□□□□ -1.42
Srp54bE9PXC0 9530002B09Rik-201ENSMUST00000024032 803 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Srp54bE9PXC0 Scp2d1-201ENSMUST00000028918 760 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Srp54bE9PXC0 Ctag2-201ENSMUST00000033524 854 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Srp54bE9PXC0 Olfr1126-201ENSMUST00000071355 945 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Srp54bE9PXC0 Timm17a-201ENSMUST00000081104 7280 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Srp54bE9PXC0 Abca14-201ENSMUST00000084640 5384 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Srp54bE9PXC0 Ogdh-201ENSMUST00000003461 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Srp54bE9PXC0 Fbxo3-202ENSMUST00000102565 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Srp54bE9PXC0 Kif27-201ENSMUST00000043605 4462 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Srp54bE9PXC0 Htr2a-201ENSMUST00000036653 5606 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Srp54bE9PXC0 Gm10309-201ENSMUST00000095186 2005 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Srp54bE9PXC0 Slc22a29-201ENSMUST00000113298 2271 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Srp54bE9PXC0 Vmn1r176-204ENSMUST00000227129 2955 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Srp54bE9PXC0 Olfr25-202ENSMUST00000212354 1362 ntAPPRIS ALT2 BASIC6.18□□□□□ -1.42
Srp54bE9PXC0 Lipk-203ENSMUST00000225505 2083 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Srp54bE9PXC0 CT025619.1-201ENSMUST00000214294 2331 ntTSL 5 BASIC6.17□□□□□ -1.42
Srp54bE9PXC0 Gm37127-201ENSMUST00000192924 3036 ntBASIC6.17□□□□□ -1.42
Srp54bE9PXC0 Crtam-203ENSMUST00000180872 4443 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Srp54bE9PXC0 Pkd1l3-202ENSMUST00000109242 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Srp54bE9PXC0 Gm5949-201ENSMUST00000213468 1421 ntBASIC6.17□□□□□ -1.42
Srp54bE9PXC0 Olfr726-207ENSMUST00000217319 1419 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Srp54bE9PXC0 Itih2-201ENSMUST00000042290 3100 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Srp54bE9PXC0 Gm12763-201ENSMUST00000151344 1939 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Srp54bE9PXC0 Zfp934-209ENSMUST00000222746 2206 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Srp54bE9PXC0 Gm6337-201ENSMUST00000168088 1758 ntAPPRIS P5 TSL 5 BASIC6.17□□□□□ -1.42
Srp54bE9PXC0 Gm10378-201ENSMUST00000100696 429 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Srp54bE9PXC0 Gm11318-201ENSMUST00000118640 961 ntBASIC6.17□□□□□ -1.42
Srp54bE9PXC0 Gm12099-201ENSMUST00000118660 750 ntBASIC6.17□□□□□ -1.42
Srp54bE9PXC0 Gm7931-201ENSMUST00000121537 271 ntBASIC6.17□□□□□ -1.42
Srp54bE9PXC0 Gm23995-201ENSMUST00000158060 129 ntBASIC6.17□□□□□ -1.42
Srp54bE9PXC0 Gm7152-201ENSMUST00000163570 605 ntBASIC6.17□□□□□ -1.42
Srp54bE9PXC0 Vmn1r-ps46-201ENSMUST00000173862 949 ntBASIC6.17□□□□□ -1.42
Srp54bE9PXC0 Vmn2r-ps3-201ENSMUST00000176077 1101 ntBASIC6.17□□□□□ -1.42
Srp54bE9PXC0 Gm6055-201ENSMUST00000180532 378 ntBASIC6.17□□□□□ -1.42
Srp54bE9PXC0 Gm26715-201ENSMUST00000181676 1095 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Srp54bE9PXC0 Gm37784-201ENSMUST00000193233 189 ntBASIC6.17□□□□□ -1.42
Srp54bE9PXC0 Olfr1409-ps1-201ENSMUST00000194013 252 ntBASIC6.17□□□□□ -1.42
Srp54bE9PXC0 Gm2040-201ENSMUST00000202979 289 ntBASIC6.17□□□□□ -1.42
Srp54bE9PXC0 Gm44206-201ENSMUST00000203044 592 ntTSL 5 BASIC6.17□□□□□ -1.42
Srp54bE9PXC0 Gm2996-201ENSMUST00000211398 537 ntBASIC6.17□□□□□ -1.42
Srp54bE9PXC0 CAAA01216754.4-203ENSMUST00000217178 1097 ntTSL 5 BASIC6.17□□□□□ -1.42
Srp54bE9PXC0 Vmn1r22-205ENSMUST00000228322 909 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Srp54bE9PXC0 Nme5-201ENSMUST00000079287 843 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Srp54bE9PXC0 Vaultrc5-201ENSMUST00000083211 143 ntBASIC6.17□□□□□ -1.42
Srp54bE9PXC0 Gm7995-201ENSMUST00000089789 429 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Srp54bE9PXC0 Olfr568-201ENSMUST00000098216 942 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Srp54bE9PXC0 Vmn1r6-204ENSMUST00000227188 8185 ntAPPRIS ALT2 BASIC6.17□□□□□ -1.42
Srp54bE9PXC0 Gm37864-201ENSMUST00000195308 3075 ntBASIC6.17□□□□□ -1.42
Srp54bE9PXC0 Fundc2-201ENSMUST00000033541 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Srp54bE9PXC0 Il18r1-202ENSMUST00000108044 4158 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Srp54bE9PXC0 Zmat4-201ENSMUST00000042352 4182 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Srp54bE9PXC0 Mdga2-210ENSMUST00000222167 2871 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Srp54bE9PXC0 Mdga2-213ENSMUST00000223141 2850 ntTSL 2 BASIC6.17□□□□□ -1.42
Srp54bE9PXC0 AC022682.2-202ENSMUST00000224394 3943 ntBASIC6.17□□□□□ -1.42
Srp54bE9PXC0 Slc24a2-204ENSMUST00000107158 10499 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Srp54bE9PXC0 Prox1-202ENSMUST00000175916 7913 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Srp54bE9PXC0 Lilrb4a-201ENSMUST00000217706 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Srp54bE9PXC0 Cntnap2-202ENSMUST00000114641 9827 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Srp54bE9PXC0 Gm10693-202ENSMUST00000205904 4007 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Srp54bE9PXC0 Zfp871-201ENSMUST00000057501 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Srp54bE9PXC0 Obox3-202ENSMUST00000095217 1603 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Srp54bE9PXC0 Odam-202ENSMUST00000129757 1370 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Srp54bE9PXC0 Spire1-202ENSMUST00000082243 4950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 76.9 ms