Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Vmn1r4-201ENSMUST00000096612 1034 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Col6a4A2AX52 Olfr556-201ENSMUST00000098219 1023 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Col6a4A2AX52 4933400F21Rik-203ENSMUST00000187295 2633 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Col6a4A2AX52 AC159195.2-201ENSMUST00000223670 3757 ntBASIC5.14□□□□□ -1.59
Col6a4A2AX52 Sptlc3-202ENSMUST00000110083 2227 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Col6a4A2AX52 Rfc1-201ENSMUST00000172732 4699 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Col6a4A2AX52 Sirpb1b-202ENSMUST00000192382 1437 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
Col6a4A2AX52 Lrriq1-201ENSMUST00000020043 2542 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Col6a4A2AX52 Cxcr6-202ENSMUST00000216072 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Col6a4A2AX52 Lgi1-209ENSMUST00000199812 2262 ntTSL 5 BASIC5.14□□□□□ -1.59
Col6a4A2AX52 Atp10b-201ENSMUST00000077659 6825 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Col6a4A2AX52 Ms4a4c-201ENSMUST00000072729 1723 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Col6a4A2AX52 Amot-202ENSMUST00000112836 6957 ntAPPRIS P2 TSL 5 BASIC5.14□□□□□ -1.59
Col6a4A2AX52 Fcrl5-204ENSMUST00000193229 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Col6a4A2AX52 Vmn1r81-204ENSMUST00000228482 13495 ntAPPRIS ALT2 BASIC5.13□□□□□ -1.59
Col6a4A2AX52 Gm44750-201ENSMUST00000206185 2223 ntBASIC5.13□□□□□ -1.59
Col6a4A2AX52 AC135119.1-202ENSMUST00000228435 2203 ntBASIC5.13□□□□□ -1.59
Col6a4A2AX52 Aktip-204ENSMUST00000120426 1687 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Col6a4A2AX52 Phf6-203ENSMUST00000154864 3057 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Col6a4A2AX52 Fsbp-201ENSMUST00000180239 4358 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Col6a4A2AX52 Cntn5-202ENSMUST00000160216 4192 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Col6a4A2AX52 Fpr3-202ENSMUST00000115565 1220 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Col6a4A2AX52 Gm8501-201ENSMUST00000117684 432 ntBASIC5.13□□□□□ -1.59
Col6a4A2AX52 Gm5381-201ENSMUST00000117975 1250 ntBASIC5.13□□□□□ -1.59
Col6a4A2AX52 Gm12937-201ENSMUST00000118333 448 ntBASIC5.13□□□□□ -1.59
Col6a4A2AX52 Gm14098-201ENSMUST00000119295 623 ntBASIC5.13□□□□□ -1.59
Col6a4A2AX52 Gm23224-201ENSMUST00000158122 271 ntBASIC5.13□□□□□ -1.59
Col6a4A2AX52 Gm28818-201ENSMUST00000187553 2989 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Col6a4A2AX52 Gm8480-201ENSMUST00000190350 698 ntBASIC5.13□□□□□ -1.59
Col6a4A2AX52 1810006J02Rik-202ENSMUST00000191060 523 ntTSL 2 BASIC5.13□□□□□ -1.59
Col6a4A2AX52 Gm37493-201ENSMUST00000193167 433 ntBASIC5.13□□□□□ -1.59
Col6a4A2AX52 Gm20926-201ENSMUST00000194457 696 ntBASIC5.13□□□□□ -1.59
Col6a4A2AX52 AC158954.1-201ENSMUST00000228272 1006 ntBASIC5.13□□□□□ -1.59
Col6a4A2AX52 Fpr3-201ENSMUST00000054871 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Col6a4A2AX52 Xlr4b-203ENSMUST00000081827 1077 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Col6a4A2AX52 Vmn1r6-203ENSMUST00000227131 8330 ntAPPRIS P2 BASIC5.13□□□□□ -1.59
Col6a4A2AX52 4930442L01Rik-201ENSMUST00000145865 2077 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Col6a4A2AX52 Gm42636-201ENSMUST00000197174 2239 ntBASIC5.13□□□□□ -1.59
Col6a4A2AX52 Serpinb9-201ENSMUST00000006391 3397 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Col6a4A2AX52 Gm29461-201ENSMUST00000189232 4176 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Col6a4A2AX52 Helz-203ENSMUST00000106746 13147 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
Col6a4A2AX52 Xpr1-201ENSMUST00000027741 7492 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Col6a4A2AX52 Nsun4-206ENSMUST00000165493 3920 ntTSL 2 BASIC5.13□□□□□ -1.59
Col6a4A2AX52 Gm7155-201ENSMUST00000121143 1671 ntBASIC5.13□□□□□ -1.59
Col6a4A2AX52 Gstz1-201ENSMUST00000063117 1656 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Col6a4A2AX52 Ncf2-202ENSMUST00000186568 3550 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Col6a4A2AX52 Ralgapa2-202ENSMUST00000109986 11030 ntAPPRIS P2 TSL 5 BASIC5.13□□□□□ -1.59
Col6a4A2AX52 Papolg-201ENSMUST00000020513 3747 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Col6a4A2AX52 Wdr17-202ENSMUST00000127511 4668 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
Col6a4A2AX52 Gm38026-201ENSMUST00000193284 3880 ntBASIC5.13□□□□□ -1.59
Col6a4A2AX52 Tmc5-204ENSMUST00000121744 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Col6a4A2AX52 Adam30-201ENSMUST00000050342 3510 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Col6a4A2AX52 Atp5l-ps2-201ENSMUST00000121382 314 ntBASIC5.13□□□□□ -1.59
Col6a4A2AX52 Vmn1r-ps107-201ENSMUST00000121458 581 ntBASIC5.13□□□□□ -1.59
Col6a4A2AX52 Gm7879-201ENSMUST00000122204 774 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Col6a4A2AX52 Gm12066-201ENSMUST00000123592 443 ntTSL 3 BASIC5.13□□□□□ -1.59
Col6a4A2AX52 Olfr377-ps1-201ENSMUST00000134011 1136 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
Col6a4A2AX52 3110099E03Rik-202ENSMUST00000134580 2644 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Col6a4A2AX52 Gm12610-201ENSMUST00000139272 581 ntTSL 3 BASIC5.13□□□□□ -1.59
Col6a4A2AX52 Gm11197-201ENSMUST00000145158 839 ntBASIC5.13□□□□□ -1.59
Col6a4A2AX52 Gm23250-201ENSMUST00000157444 267 ntBASIC5.13□□□□□ -1.59
Col6a4A2AX52 Vmn1r91-201ENSMUST00000165330 924 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Col6a4A2AX52 Vmn2r-ps131-201ENSMUST00000176094 1046 ntBASIC5.13□□□□□ -1.59
Col6a4A2AX52 Trav12-2-201ENSMUST00000180972 426 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Col6a4A2AX52 Rhox7-ps2-201ENSMUST00000197804 322 ntBASIC5.13□□□□□ -1.59
Col6a4A2AX52 Gm43421-201ENSMUST00000200044 2905 ntBASIC5.13□□□□□ -1.59
Col6a4A2AX52 Alox5ap-203ENSMUST00000200928 356 ntTSL 3 BASIC5.13□□□□□ -1.59
Col6a4A2AX52 Gm33242-201ENSMUST00000212130 1057 ntBASIC5.13□□□□□ -1.59
Col6a4A2AX52 AC122371.2-201ENSMUST00000220583 366 ntBASIC5.13□□□□□ -1.59
Col6a4A2AX52 Smim15-202ENSMUST00000223808 808 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Col6a4A2AX52 AL607142.1-201ENSMUST00000226560 78 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Col6a4A2AX52 AC163664.2-201ENSMUST00000228894 459 ntBASIC5.13□□□□□ -1.59
Col6a4A2AX52 Gm9788-201ENSMUST00000057038 906 ntBASIC5.13□□□□□ -1.59
Col6a4A2AX52 Vmn2r41-201ENSMUST00000168807 3617 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Col6a4A2AX52 Vmn1r8-203ENSMUST00000228690 1699 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Col6a4A2AX52 Ryr3-201ENSMUST00000080673 15422 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
Col6a4A2AX52 Angptl1-201ENSMUST00000027885 2651 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Col6a4A2AX52 Gm15354-201ENSMUST00000132019 1772 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Col6a4A2AX52 B3gnt5-203ENSMUST00000121344 4175 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Col6a4A2AX52 Gm15232-201ENSMUST00000146929 2318 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Col6a4A2AX52 Olfr202-203ENSMUST00000217485 1321 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Col6a4A2AX52 Aox3-201ENSMUST00000040999 4606 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Col6a4A2AX52 Ints9-201ENSMUST00000043914 2674 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Col6a4A2AX52 Rab11fip2-203ENSMUST00000171986 5363 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Col6a4A2AX52 Mgam2-ps-201ENSMUST00000195870 3745 ntBASIC5.12□□□□□ -1.59
Col6a4A2AX52 Ttc41-201ENSMUST00000061458 1815 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Col6a4A2AX52 5830416I19Rik-201ENSMUST00000198687 2627 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Col6a4A2AX52 Gm16205-201ENSMUST00000117720 1027 ntBASIC5.12□□□□□ -1.59
Col6a4A2AX52 Gm11909-201ENSMUST00000121424 759 ntBASIC5.12□□□□□ -1.59
Col6a4A2AX52 Gm12399-201ENSMUST00000121475 446 ntBASIC5.12□□□□□ -1.59
Col6a4A2AX52 Gm13007-201ENSMUST00000121866 365 ntBASIC5.12□□□□□ -1.59
Col6a4A2AX52 Gm22959-201ENSMUST00000122514 303 ntBASIC5.12□□□□□ -1.59
Col6a4A2AX52 Gm26312-201ENSMUST00000157769 165 ntBASIC5.12□□□□□ -1.59
Col6a4A2AX52 Gm24236-201ENSMUST00000157794 134 ntBASIC5.12□□□□□ -1.59
Col6a4A2AX52 Gm23071-201ENSMUST00000158242 115 ntBASIC5.12□□□□□ -1.59
Col6a4A2AX52 Rps8-ps1-201ENSMUST00000172445 624 ntBASIC5.12□□□□□ -1.59
Col6a4A2AX52 Rps12-ps24-201ENSMUST00000182321 381 ntBASIC5.12□□□□□ -1.59
Col6a4A2AX52 Gm5306-201ENSMUST00000203325 757 ntBASIC5.12□□□□□ -1.59
Col6a4A2AX52 Gm7557-201ENSMUST00000221935 865 ntBASIC5.12□□□□□ -1.59
Col6a4A2AX52 Tas2r105-201ENSMUST00000053652 964 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 77 ms