Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Gm28066-201ENSMUST00000188657 472 ntBASIC6.74□□□□□ -1.33
Scn3aA2ASI5 Gm28501-201ENSMUST00000188729 421 ntTSL 2 BASIC6.74□□□□□ -1.33
Scn3aA2ASI5 Ass-ps1-201ENSMUST00000197717 761 ntBASIC6.74□□□□□ -1.33
Scn3aA2ASI5 Noxred1-201ENSMUST00000021423 1101 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Scn3aA2ASI5 AC117797.1-201ENSMUST00000223977 695 ntBASIC6.74□□□□□ -1.33
Scn3aA2ASI5 Ceacam12-201ENSMUST00000032520 1056 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
Scn3aA2ASI5 Spata31d1d-201ENSMUST00000052978 3827 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
Scn3aA2ASI5 Olfr263-201ENSMUST00000096006 1087 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Scn3aA2ASI5 Vmn1r168-201ENSMUST00000098704 930 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Scn3aA2ASI5 AC110043.1-201ENSMUST00000220278 1627 ntBASIC6.74□□□□□ -1.33
Scn3aA2ASI5 Eif2s3x-201ENSMUST00000050328 3647 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Scn3aA2ASI5 Adgrb3-201ENSMUST00000041838 5059 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Scn3aA2ASI5 A2m-201ENSMUST00000032203 4605 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Scn3aA2ASI5 Fbxo3-204ENSMUST00000111136 4211 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Scn3aA2ASI5 Gm4221-202ENSMUST00000181765 2988 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Scn3aA2ASI5 Gm45876-201ENSMUST00000212698 2709 ntBASIC6.73□□□□□ -1.33
Scn3aA2ASI5 Gm12018-201ENSMUST00000150694 3375 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Scn3aA2ASI5 Golph3l-201ENSMUST00000060323 2652 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Scn3aA2ASI5 Sestd1-202ENSMUST00000102660 8990 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Scn3aA2ASI5 Olfr508-201ENSMUST00000072914 1635 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Scn3aA2ASI5 Gm11737-201ENSMUST00000118713 468 ntBASIC6.73□□□□□ -1.33
Scn3aA2ASI5 Gm15660-201ENSMUST00000118997 478 ntBASIC6.73□□□□□ -1.33
Scn3aA2ASI5 Olfr405-ps1-201ENSMUST00000120649 936 ntBASIC6.73□□□□□ -1.33
Scn3aA2ASI5 Gm5401-201ENSMUST00000122444 365 ntBASIC6.73□□□□□ -1.33
Scn3aA2ASI5 Gm15063-201ENSMUST00000152648 895 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Scn3aA2ASI5 Vmn2r-ps32-201ENSMUST00000175794 757 ntBASIC6.73□□□□□ -1.33
Scn3aA2ASI5 Gm27225-201ENSMUST00000183833 557 ntBASIC6.73□□□□□ -1.33
Scn3aA2ASI5 Ly6a-204ENSMUST00000187994 955 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Scn3aA2ASI5 Tbc1d24-213ENSMUST00000201805 3806 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Scn3aA2ASI5 Gm36328-201ENSMUST00000204237 432 ntTSL 3 BASIC6.73□□□□□ -1.33
Scn3aA2ASI5 Gm20756-202ENSMUST00000201324 1565 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Scn3aA2ASI5 Cd44-207ENSMUST00000111194 5045 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Scn3aA2ASI5 Mir99ahg-214ENSMUST00000183333 3422 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Scn3aA2ASI5 AC154630.1-201ENSMUST00000215334 2440 ntBASIC6.73□□□□□ -1.33
Scn3aA2ASI5 Ptpn22-201ENSMUST00000029433 2743 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Scn3aA2ASI5 Adipor2-201ENSMUST00000032272 4184 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Scn3aA2ASI5 Themis-203ENSMUST00000105516 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Scn3aA2ASI5 Adamts12-201ENSMUST00000061318 8579 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Scn3aA2ASI5 Fbxw27-208ENSMUST00000212725 1483 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Scn3aA2ASI5 Aox4-201ENSMUST00000040442 4973 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Scn3aA2ASI5 Olfr521-202ENSMUST00000219663 2277 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Scn3aA2ASI5 Gmeb1-207ENSMUST00000168553 6523 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Scn3aA2ASI5 Olfr1392-206ENSMUST00000215861 3670 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Scn3aA2ASI5 Ttf1-201ENSMUST00000100237 4160 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Scn3aA2ASI5 Gm17473-201ENSMUST00000180585 2216 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Scn3aA2ASI5 Gm44043-201ENSMUST00000203426 3253 ntBASIC6.72□□□□□ -1.33
Scn3aA2ASI5 Zfp773-202ENSMUST00000211240 4073 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Scn3aA2ASI5 Mxi1-203ENSMUST00000111737 4843 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Scn3aA2ASI5 Gm37855-201ENSMUST00000192571 3700 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Scn3aA2ASI5 Ms4a13-202ENSMUST00000188464 1301 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Scn3aA2ASI5 Sntg1-204ENSMUST00000132064 4165 ntTSL 5 BASIC6.72□□□□□ -1.33
Scn3aA2ASI5 Kbtbd8-201ENSMUST00000032107 4869 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Scn3aA2ASI5 Igkv8-26-201ENSMUST00000103382 371 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Scn3aA2ASI5 Gm13489-201ENSMUST00000121234 971 ntBASIC6.72□□□□□ -1.33
Scn3aA2ASI5 Klra13-ps-201ENSMUST00000125813 802 ntBASIC6.72□□□□□ -1.33
Scn3aA2ASI5 Sumo2-207ENSMUST00000153892 1051 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Scn3aA2ASI5 Obox4-ps23-201ENSMUST00000175738 1137 ntBASIC6.72□□□□□ -1.33
Scn3aA2ASI5 Obox4-ps33-201ENSMUST00000176649 1139 ntBASIC6.72□□□□□ -1.33
Scn3aA2ASI5 Obox4-ps22-201ENSMUST00000179602 1137 ntBASIC6.72□□□□□ -1.33
Scn3aA2ASI5 Obox4-ps13-201ENSMUST00000180123 1137 ntBASIC6.72□□□□□ -1.33
Scn3aA2ASI5 1700101I11Rik-201ENSMUST00000181594 896 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Scn3aA2ASI5 Gm4258-201ENSMUST00000182127 506 ntTSL 2 BASIC6.72□□□□□ -1.33
Scn3aA2ASI5 1700028M03Rik-201ENSMUST00000185938 476 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Scn3aA2ASI5 Gm43779-201ENSMUST00000196691 829 ntBASIC6.72□□□□□ -1.33
Scn3aA2ASI5 Gm43456-201ENSMUST00000202519 457 ntBASIC6.72□□□□□ -1.33
Scn3aA2ASI5 Gm44997-202ENSMUST00000205970 425 ntTSL 3 BASIC6.72□□□□□ -1.33
Scn3aA2ASI5 Psma4-201ENSMUST00000034848 1165 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Scn3aA2ASI5 Stk4-202ENSMUST00000088291 4098 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Scn3aA2ASI5 Wdr66-206ENSMUST00000163092 4009 ntTSL 5 BASIC6.72□□□□□ -1.33
Scn3aA2ASI5 Pabpc4l-201ENSMUST00000166505 5218 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
Scn3aA2ASI5 Serpina10-201ENSMUST00000044231 3498 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Scn3aA2ASI5 Gm42975-201ENSMUST00000200612 1491 ntBASIC6.72□□□□□ -1.33
Scn3aA2ASI5 Gm26707-201ENSMUST00000181552 3902 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Scn3aA2ASI5 Cytip-201ENSMUST00000028175 6110 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Scn3aA2ASI5 Olfr1254-203ENSMUST00000216587 2183 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Scn3aA2ASI5 Olfr60-205ENSMUST00000216027 3300 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Scn3aA2ASI5 Psg21-202ENSMUST00000182128 2066 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Scn3aA2ASI5 Gm38029-201ENSMUST00000192669 2090 ntBASIC6.72□□□□□ -1.33
Scn3aA2ASI5 Ndufaf4-201ENSMUST00000029925 3632 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Scn3aA2ASI5 Pcdh15-237ENSMUST00000193361 7881 ntAPPRIS P3 TSL 5 BASIC6.72□□□□□ -1.33
Scn3aA2ASI5 Gm12051-201ENSMUST00000147771 1341 ntTSL 5 BASIC6.72□□□□□ -1.33
Scn3aA2ASI5 Gm45084-201ENSMUST00000207096 1957 ntBASIC6.72□□□□□ -1.33
Scn3aA2ASI5 Vmn1r52-204ENSMUST00000227578 2370 ntBASIC6.72□□□□□ -1.33
Scn3aA2ASI5 Igkv4-71-201ENSMUST00000101325 288 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Scn3aA2ASI5 Gm13770-201ENSMUST00000117149 305 ntBASIC6.72□□□□□ -1.33
Scn3aA2ASI5 Gm16135-201ENSMUST00000129470 568 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Scn3aA2ASI5 Gm7580-201ENSMUST00000132826 497 ntTSL 3 BASIC6.72□□□□□ -1.33
Scn3aA2ASI5 Gm20480-201ENSMUST00000173953 250 ntBASIC6.72□□□□□ -1.33
Scn3aA2ASI5 Mir7008-201ENSMUST00000184398 63 ntBASIC6.72□□□□□ -1.33
Scn3aA2ASI5 Gm28640-201ENSMUST00000190918 550 ntBASIC6.72□□□□□ -1.33
Scn3aA2ASI5 Mir219c-201ENSMUST00000199860 60 ntBASIC6.72□□□□□ -1.33
Scn3aA2ASI5 Gm44053-201ENSMUST00000203364 929 ntBASIC6.72□□□□□ -1.33
Scn3aA2ASI5 Gm45820-201ENSMUST00000212068 362 ntTSL 3 BASIC6.72□□□□□ -1.33
Scn3aA2ASI5 4930591E09Rik-201ENSMUST00000215643 480 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Scn3aA2ASI5 4930591A17Rik-201ENSMUST00000041998 737 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Scn3aA2ASI5 Gm37686-201ENSMUST00000194099 2309 ntBASIC6.72□□□□□ -1.33
Scn3aA2ASI5 Mum1l1-202ENSMUST00000113042 4182 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Scn3aA2ASI5 Xpo1-204ENSMUST00000109551 4906 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Scn3aA2ASI5 B230217J21Rik-201ENSMUST00000218349 3896 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Scn3aA2ASI5 Hrh2-202ENSMUST00000209846 4074 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms