Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Gm9292-201ENSMUST00000222008 710 ntBASIC6.05□□□□□ -1.44
H2afb2S4R1M3 9130015A21Rik-202ENSMUST00000222153 837 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
H2afb2S4R1M3 AC113269.1-201ENSMUST00000227185 674 ntBASIC6.05□□□□□ -1.44
H2afb2S4R1M3 Lgals2-201ENSMUST00000044584 590 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
H2afb2S4R1M3 Olfr1354-201ENSMUST00000075859 1095 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
H2afb2S4R1M3 Rhox3h-201ENSMUST00000096457 1053 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
H2afb2S4R1M3 Olfr646-201ENSMUST00000098182 939 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
H2afb2S4R1M3 Otc-201ENSMUST00000049910 2319 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
H2afb2S4R1M3 Toporsl-201ENSMUST00000029995 2668 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
H2afb2S4R1M3 Gm9930-201ENSMUST00000066742 3151 ntBASIC6.05□□□□□ -1.44
H2afb2S4R1M3 Gm5832-201ENSMUST00000121704 1582 ntBASIC6.05□□□□□ -1.44
H2afb2S4R1M3 Shprh-201ENSMUST00000044053 9271 ntAPPRIS P4 TSL 1 (best) BASIC6.05□□□□□ -1.44
H2afb2S4R1M3 Gm44209-201ENSMUST00000204556 4153 ntBASIC6.05□□□□□ -1.44
H2afb2S4R1M3 Vmn2r-ps139-201ENSMUST00000190764 2057 ntBASIC6.05□□□□□ -1.44
H2afb2S4R1M3 4921518K17Rik-201ENSMUST00000143949 3390 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
H2afb2S4R1M3 Gm10220-201ENSMUST00000088236 2980 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
H2afb2S4R1M3 Sgip1-203ENSMUST00000080728 3712 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
H2afb2S4R1M3 Rbpj-202ENSMUST00000087360 5252 ntTSL 5 BASIC6.04□□□□□ -1.44
H2afb2S4R1M3 Gm44416-201ENSMUST00000204055 2066 ntBASIC6.04□□□□□ -1.44
H2afb2S4R1M3 Gm24272-201ENSMUST00000102329 98 ntBASIC6.04□□□□□ -1.44
H2afb2S4R1M3 Defb45-201ENSMUST00000109834 385 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
H2afb2S4R1M3 Gm13768-201ENSMUST00000116469 929 ntBASIC6.04□□□□□ -1.44
H2afb2S4R1M3 Rpl7a-ps9-201ENSMUST00000117118 777 ntBASIC6.04□□□□□ -1.44
H2afb2S4R1M3 Gm12396-201ENSMUST00000121600 306 ntBASIC6.04□□□□□ -1.44
H2afb2S4R1M3 Gm12451-201ENSMUST00000121636 633 ntBASIC6.04□□□□□ -1.44
H2afb2S4R1M3 Gm13299-201ENSMUST00000133644 425 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
H2afb2S4R1M3 Junos-206ENSMUST00000133772 635 ntTSL 2 BASIC6.04□□□□□ -1.44
H2afb2S4R1M3 Fam229b-205ENSMUST00000135785 674 ntAPPRIS P1 TSL 3 BASIC6.04□□□□□ -1.44
H2afb2S4R1M3 AI646519-201ENSMUST00000140987 351 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
H2afb2S4R1M3 Gm13307-202ENSMUST00000142990 425 ntTSL 5 BASIC6.04□□□□□ -1.44
H2afb2S4R1M3 4930451E10Rik-202ENSMUST00000152292 557 ntTSL 3 BASIC6.04□□□□□ -1.44
H2afb2S4R1M3 Gm24155-201ENSMUST00000175259 110 ntBASIC6.04□□□□□ -1.44
H2afb2S4R1M3 Scarletltr-201ENSMUST00000176950 305 ntTSL 5 BASIC6.04□□□□□ -1.44
H2afb2S4R1M3 Gm26851-201ENSMUST00000181867 918 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
H2afb2S4R1M3 1110008L16Rik-203ENSMUST00000183654 943 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
H2afb2S4R1M3 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
H2afb2S4R1M3 Gm37604-201ENSMUST00000191749 1272 ntBASIC6.04□□□□□ -1.44
H2afb2S4R1M3 Gm37958-201ENSMUST00000193131 430 ntTSL 3 BASIC6.04□□□□□ -1.44
H2afb2S4R1M3 4933436F18Rik-201ENSMUST00000193468 802 ntBASIC6.04□□□□□ -1.44
H2afb2S4R1M3 Gm37774-201ENSMUST00000194401 245 ntBASIC6.04□□□□□ -1.44
H2afb2S4R1M3 Ighv5-3-201ENSMUST00000195336 322 ntBASIC6.04□□□□□ -1.44
H2afb2S4R1M3 Gm43391-203ENSMUST00000198110 1001 ntTSL 5 BASIC6.04□□□□□ -1.44
H2afb2S4R1M3 Gm43126-201ENSMUST00000201546 429 ntTSL 3 BASIC6.04□□□□□ -1.44
H2afb2S4R1M3 Gm45303-201ENSMUST00000211239 676 ntTSL 3 BASIC6.04□□□□□ -1.44
H2afb2S4R1M3 AC166352.1-201ENSMUST00000215483 1105 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
H2afb2S4R1M3 AC153528.1-201ENSMUST00000217696 434 ntTSL 3 BASIC6.04□□□□□ -1.44
H2afb2S4R1M3 Gm3266-201ENSMUST00000217832 591 ntBASIC6.04□□□□□ -1.44
H2afb2S4R1M3 AC133598.3-204ENSMUST00000224260 767 ntBASIC6.04□□□□□ -1.44
H2afb2S4R1M3 Scgb2b24-201ENSMUST00000055444 523 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
H2afb2S4R1M3 Olfr930-201ENSMUST00000058789 1101 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
H2afb2S4R1M3 Olfr794-201ENSMUST00000059957 963 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
H2afb2S4R1M3 Olfr1447-201ENSMUST00000071484 1113 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
H2afb2S4R1M3 Gm8444-201ENSMUST00000092020 357 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
H2afb2S4R1M3 G530011O06Rik-201ENSMUST00000154810 2380 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
H2afb2S4R1M3 Gm42881-201ENSMUST00000198636 3344 ntBASIC6.04□□□□□ -1.44
H2afb2S4R1M3 Gm43330-201ENSMUST00000199706 2153 ntBASIC6.04□□□□□ -1.44
H2afb2S4R1M3 2610044O15Rik8-202ENSMUST00000186619 2337 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
H2afb2S4R1M3 Cdh6-201ENSMUST00000036439 8167 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
H2afb2S4R1M3 Fam26d-202ENSMUST00000218239 3075 ntBASIC6.04□□□□□ -1.44
H2afb2S4R1M3 Wdr66-207ENSMUST00000170536 3679 ntTSL 5 BASIC6.04□□□□□ -1.44
H2afb2S4R1M3 Psd3-205ENSMUST00000098696 11316 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
H2afb2S4R1M3 Gm13270-201ENSMUST00000149137 1686 ntTSL 2 BASIC6.04□□□□□ -1.44
H2afb2S4R1M3 Gm6145-206ENSMUST00000211251 2850 ntTSL 5 BASIC6.04□□□□□ -1.44
H2afb2S4R1M3 Cep57l1-202ENSMUST00000105505 2071 ntAPPRIS P3 TSL 5 BASIC6.03□□□□□ -1.44
H2afb2S4R1M3 Gm3424-201ENSMUST00000164585 1758 ntAPPRIS P5 TSL 5 BASIC6.03□□□□□ -1.44
H2afb2S4R1M3 Gm3182-201ENSMUST00000167902 1753 ntAPPRIS P5 TSL 5 BASIC6.03□□□□□ -1.44
H2afb2S4R1M3 Slc17a4-201ENSMUST00000021769 1604 ntAPPRIS P2 TSL 5 BASIC6.03□□□□□ -1.44
H2afb2S4R1M3 1810046K07Rik-201ENSMUST00000039959 1318 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
H2afb2S4R1M3 Gm45413-201ENSMUST00000210389 3538 ntBASIC6.03□□□□□ -1.44
H2afb2S4R1M3 Ptprd-201ENSMUST00000050757 4698 ntTSL 5 BASIC6.03□□□□□ -1.44
H2afb2S4R1M3 A330008L17Rik-202ENSMUST00000153366 2614 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
H2afb2S4R1M3 Gm43611-201ENSMUST00000196656 4352 ntBASIC6.03□□□□□ -1.44
H2afb2S4R1M3 Sorbs2-231ENSMUST00000171337 5651 ntAPPRIS P4 TSL 1 (best) BASIC6.03□□□□□ -1.44
H2afb2S4R1M3 Olfr1348-209ENSMUST00000213549 2714 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
H2afb2S4R1M3 Ighv1-18-201ENSMUST00000103504 306 ntAPPRIS ALT2 BASIC6.03□□□□□ -1.44
H2afb2S4R1M3 Snora35-201ENSMUST00000104579 128 ntBASIC6.03□□□□□ -1.44
H2afb2S4R1M3 Cd47-202ENSMUST00000114496 867 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
H2afb2S4R1M3 Gm12713-201ENSMUST00000118404 764 ntBASIC6.03□□□□□ -1.44
H2afb2S4R1M3 Gm16074-201ENSMUST00000119524 444 ntBASIC6.03□□□□□ -1.44
H2afb2S4R1M3 Gm11609-201ENSMUST00000121926 793 ntBASIC6.03□□□□□ -1.44
H2afb2S4R1M3 4930513N10Rik-202ENSMUST00000132616 490 ntTSL 3 BASIC6.03□□□□□ -1.44
H2afb2S4R1M3 Gm11292-201ENSMUST00000146121 1153 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
H2afb2S4R1M3 Gm15634-201ENSMUST00000147206 492 ntTSL 3 BASIC6.03□□□□□ -1.44
H2afb2S4R1M3 Tmem27-201ENSMUST00000015545 1262 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
H2afb2S4R1M3 Snora47-201ENSMUST00000157483 138 ntBASIC6.03□□□□□ -1.44
H2afb2S4R1M3 Gm25219-201ENSMUST00000157545 330 ntBASIC6.03□□□□□ -1.44
H2afb2S4R1M3 Gm22428-201ENSMUST00000158554 132 ntBASIC6.03□□□□□ -1.44
H2afb2S4R1M3 B230118H07Rik-209ENSMUST00000160722 931 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
H2afb2S4R1M3 Oprk1-204ENSMUST00000160777 4675 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
H2afb2S4R1M3 Gm17078-201ENSMUST00000167617 668 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
H2afb2S4R1M3 Gm17174-201ENSMUST00000178962 671 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
H2afb2S4R1M3 Gm29587-201ENSMUST00000189898 332 ntTSL 5 BASIC6.03□□□□□ -1.44
H2afb2S4R1M3 1810012K16Rik-201ENSMUST00000190830 547 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
H2afb2S4R1M3 1700108F19Rik-207ENSMUST00000191384 210 ntTSL 3 BASIC6.03□□□□□ -1.44
H2afb2S4R1M3 Gm43269-201ENSMUST00000202075 518 ntTSL 3 BASIC6.03□□□□□ -1.44
H2afb2S4R1M3 Gm18839-201ENSMUST00000204292 670 ntBASIC6.03□□□□□ -1.44
H2afb2S4R1M3 Gm45823-201ENSMUST00000212714 515 ntTSL 5 BASIC6.03□□□□□ -1.44
H2afb2S4R1M3 Gm35188-201ENSMUST00000218869 535 ntTSL 3 BASIC6.03□□□□□ -1.44
H2afb2S4R1M3 AC151904.3-201ENSMUST00000219266 895 ntBASIC6.03□□□□□ -1.44
H2afb2S4R1M3 AC153936.1-201ENSMUST00000219874 395 ntBASIC6.03□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms