Protein–RNA interactions for Protein: Q9DCN7

Rnft1, E3 ubiquitin-protein ligase RNFT1, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnft1Q9DCN7 Gm37439-201ENSMUST00000193150 856 ntBASIC6.32□□□□□ -1.4
Rnft1Q9DCN7 Gm36965-201ENSMUST00000193797 394 ntBASIC6.32□□□□□ -1.4
Rnft1Q9DCN7 Ccl12-201ENSMUST00000000194 537 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Rnft1Q9DCN7 Gm8023-201ENSMUST00000195298 903 ntBASIC6.32□□□□□ -1.4
Rnft1Q9DCN7 Mir1892-201ENSMUST00000197752 80 ntBASIC6.32□□□□□ -1.4
Rnft1Q9DCN7 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC6.32□□□□□ -1.4
Rnft1Q9DCN7 Gm43090-201ENSMUST00000202459 314 ntBASIC6.32□□□□□ -1.4
Rnft1Q9DCN7 Gm44053-201ENSMUST00000203364 929 ntBASIC6.32□□□□□ -1.4
Rnft1Q9DCN7 Gm44243-201ENSMUST00000204323 692 ntBASIC6.32□□□□□ -1.4
Rnft1Q9DCN7 Gm4872-201ENSMUST00000205210 1299 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Rnft1Q9DCN7 Gm44674-201ENSMUST00000206159 415 ntTSL 3 BASIC6.32□□□□□ -1.4
Rnft1Q9DCN7 Gm7587-201ENSMUST00000207618 1021 ntBASIC6.32□□□□□ -1.4
Rnft1Q9DCN7 Gm31663-202ENSMUST00000208481 1190 ntBASIC6.32□□□□□ -1.4
Rnft1Q9DCN7 2310008N11Rik-203ENSMUST00000210732 601 ntTSL 5 BASIC6.32□□□□□ -1.4
Rnft1Q9DCN7 Gm6885-201ENSMUST00000217261 372 ntBASIC6.32□□□□□ -1.4
Rnft1Q9DCN7 Gm8275-201ENSMUST00000219732 424 ntBASIC6.32□□□□□ -1.4
Rnft1Q9DCN7 CT030657.2-201ENSMUST00000220710 792 ntTSL 5 BASIC6.32□□□□□ -1.4
Rnft1Q9DCN7 AC165260.1-201ENSMUST00000224127 683 ntBASIC6.32□□□□□ -1.4
Rnft1Q9DCN7 AC131710.2-201ENSMUST00000226773 683 ntBASIC6.32□□□□□ -1.4
Rnft1Q9DCN7 H2-M11-201ENSMUST00000041964 1006 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Rnft1Q9DCN7 Olfr648-201ENSMUST00000052659 951 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Rnft1Q9DCN7 Fpr2-201ENSMUST00000064068 1133 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Rnft1Q9DCN7 Vmn1r6-201ENSMUST00000079669 1058 ntAPPRIS P2 BASIC6.32□□□□□ -1.4
Rnft1Q9DCN7 Gm22971-201ENSMUST00000083305 97 ntBASIC6.32□□□□□ -1.4
Rnft1Q9DCN7 Nckap5-203ENSMUST00000094610 739 ntTSL 3 BASIC6.32□□□□□ -1.4
Rnft1Q9DCN7 Poln-206ENSMUST00000202638 2814 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Rnft1Q9DCN7 Fmr1-204ENSMUST00000114655 4199 ntAPPRIS P5 TSL 5 BASIC6.32□□□□□ -1.4
Rnft1Q9DCN7 Pik3c2a-204ENSMUST00000206219 5670 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Rnft1Q9DCN7 Usp17lb-201ENSMUST00000076501 1407 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Rnft1Q9DCN7 Fstl5-203ENSMUST00000160261 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Rnft1Q9DCN7 Vmn2r-ps21-201ENSMUST00000177115 2947 ntBASIC6.32□□□□□ -1.4
Rnft1Q9DCN7 Osbpl9-213ENSMUST00000160271 2604 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Rnft1Q9DCN7 Rnf219-201ENSMUST00000022716 3420 ntAPPRIS P2 TSL 3 BASIC6.31□□□□□ -1.4
Rnft1Q9DCN7 Zfp317-203ENSMUST00000213725 2354 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Rnft1Q9DCN7 Psd3-214ENSMUST00000212960 4562 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
Rnft1Q9DCN7 Zfhx4-203ENSMUST00000175866 11287 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
Rnft1Q9DCN7 Olfr1360-203ENSMUST00000216083 2315 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Rnft1Q9DCN7 Ipo11-205ENSMUST00000186033 4147 ntTSL 5 BASIC6.31□□□□□ -1.4
Rnft1Q9DCN7 Gm43638-201ENSMUST00000201519 2297 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Rnft1Q9DCN7 Olfr1196-201ENSMUST00000104892 945 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Rnft1Q9DCN7 Gm13463-201ENSMUST00000119020 233 ntBASIC6.31□□□□□ -1.4
Rnft1Q9DCN7 Gm13338-201ENSMUST00000120235 361 ntBASIC6.31□□□□□ -1.4
Rnft1Q9DCN7 Gm13502-201ENSMUST00000121574 684 ntBASIC6.31□□□□□ -1.4
Rnft1Q9DCN7 Gm16196-201ENSMUST00000137730 464 ntTSL 3 BASIC6.31□□□□□ -1.4
Rnft1Q9DCN7 Gm7651-201ENSMUST00000173398 901 ntBASIC6.31□□□□□ -1.4
Rnft1Q9DCN7 Csnk2b-209ENSMUST00000174779 632 ntTSL 2 BASIC6.31□□□□□ -1.4
Rnft1Q9DCN7 Gm5039-201ENSMUST00000177747 435 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Rnft1Q9DCN7 Gm8332-201ENSMUST00000179468 435 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Rnft1Q9DCN7 Gm2035-201ENSMUST00000180053 435 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Rnft1Q9DCN7 Gm9658-201ENSMUST00000182757 1012 ntBASIC6.31□□□□□ -1.4
Rnft1Q9DCN7 Gm8604-201ENSMUST00000183150 965 ntBASIC6.31□□□□□ -1.4
Rnft1Q9DCN7 Gm27617-201ENSMUST00000184321 168 ntBASIC6.31□□□□□ -1.4
Rnft1Q9DCN7 Mir7058-201ENSMUST00000184637 75 ntBASIC6.31□□□□□ -1.4
Rnft1Q9DCN7 9430002A10Rik-202ENSMUST00000185395 475 ntBASIC6.31□□□□□ -1.4
Rnft1Q9DCN7 Gm28688-201ENSMUST00000187301 268 ntBASIC6.31□□□□□ -1.4
Rnft1Q9DCN7 Gm18875-201ENSMUST00000188563 882 ntBASIC6.31□□□□□ -1.4
Rnft1Q9DCN7 Gm37376-201ENSMUST00000192176 453 ntBASIC6.31□□□□□ -1.4
Rnft1Q9DCN7 Gm37543-201ENSMUST00000192443 1031 ntBASIC6.31□□□□□ -1.4
Rnft1Q9DCN7 Gm38232-201ENSMUST00000193602 411 ntTSL 5 BASIC6.31□□□□□ -1.4
Rnft1Q9DCN7 Cfhr2-202ENSMUST00000194186 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Rnft1Q9DCN7 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC6.31□□□□□ -1.4
Rnft1Q9DCN7 Obox4-ps7-201ENSMUST00000196144 505 ntBASIC6.31□□□□□ -1.4
Rnft1Q9DCN7 Gm35570-201ENSMUST00000198730 681 ntBASIC6.31□□□□□ -1.4
Rnft1Q9DCN7 Gm4525-201ENSMUST00000198831 254 ntBASIC6.31□□□□□ -1.4
Rnft1Q9DCN7 Gm43089-201ENSMUST00000199162 275 ntBASIC6.31□□□□□ -1.4
Rnft1Q9DCN7 AC099934.1-201ENSMUST00000200493 79 ntBASIC6.31□□□□□ -1.4
Rnft1Q9DCN7 Trav12-4-201ENSMUST00000200663 271 ntBASIC6.31□□□□□ -1.4
Rnft1Q9DCN7 Gm42558-201ENSMUST00000200982 265 ntBASIC6.31□□□□□ -1.4
Rnft1Q9DCN7 Gm5027-201ENSMUST00000206700 375 ntBASIC6.31□□□□□ -1.4
Rnft1Q9DCN7 E230032D23Rik-201ENSMUST00000207189 848 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Rnft1Q9DCN7 Gm4548-201ENSMUST00000208487 509 ntBASIC6.31□□□□□ -1.4
Rnft1Q9DCN7 Gm35021-202ENSMUST00000210289 961 ntTSL 5 BASIC6.31□□□□□ -1.4
Rnft1Q9DCN7 Gm45382-201ENSMUST00000210607 151 ntBASIC6.31□□□□□ -1.4
Rnft1Q9DCN7 Gm19987-201ENSMUST00000216339 499 ntBASIC6.31□□□□□ -1.4
Rnft1Q9DCN7 AC118230.1-201ENSMUST00000220196 656 ntBASIC6.31□□□□□ -1.4
Rnft1Q9DCN7 Gm21936-201ENSMUST00000221442 435 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Rnft1Q9DCN7 1700019C18Rik-202ENSMUST00000221688 1047 ntTSL 5 BASIC6.31□□□□□ -1.4
Rnft1Q9DCN7 AC211878.5-201ENSMUST00000221697 409 ntBASIC6.31□□□□□ -1.4
Rnft1Q9DCN7 4932702P03Rik-203ENSMUST00000225028 670 ntBASIC6.31□□□□□ -1.4
Rnft1Q9DCN7 Vmn1r89-206ENSMUST00000227319 985 ntBASIC6.31□□□□□ -1.4
Rnft1Q9DCN7 AC122937.2-201ENSMUST00000228258 1051 ntBASIC6.31□□□□□ -1.4
Rnft1Q9DCN7 Dpm2-201ENSMUST00000028151 869 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Rnft1Q9DCN7 Clec2d-201ENSMUST00000032260 1213 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Rnft1Q9DCN7 Olfr1448-201ENSMUST00000054737 945 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Rnft1Q9DCN7 Ctsj-201ENSMUST00000071526 1271 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Rnft1Q9DCN7 Prl7c1-201ENSMUST00000072943 1016 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Rnft1Q9DCN7 Rnase6-201ENSMUST00000095923 1072 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Rnft1Q9DCN7 Olfr1197-201ENSMUST00000099815 945 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Rnft1Q9DCN7 Olfr325-202ENSMUST00000203418 1649 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
Rnft1Q9DCN7 Pomp-202ENSMUST00000201120 3850 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Rnft1Q9DCN7 Vmn1r37-204ENSMUST00000226974 1770 ntAPPRIS P2 BASIC6.31□□□□□ -1.4
Rnft1Q9DCN7 Gm42892-201ENSMUST00000196227 3973 ntBASIC6.31□□□□□ -1.4
Rnft1Q9DCN7 Oas2-202ENSMUST00000081491 3961 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Rnft1Q9DCN7 Vmn1r171-212ENSMUST00000228674 2488 ntAPPRIS ALT2 BASIC6.31□□□□□ -1.4
Rnft1Q9DCN7 Pcdh15-211ENSMUST00000126920 6866 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
Rnft1Q9DCN7 Gm12018-201ENSMUST00000150694 3375 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Rnft1Q9DCN7 Cnot2-203ENSMUST00000105267 2800 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Rnft1Q9DCN7 Slc17a2-201ENSMUST00000006786 4629 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Rnft1Q9DCN7 Gm36947-201ENSMUST00000194709 2249 ntBASIC6.3□□□□□ -1.4
Rnft1Q9DCN7 Zdhhc17-201ENSMUST00000041723 4548 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms