Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Eif2s3x-201ENSMUST00000050328 3647 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Cdc40Q9DC48 Vmn2r13-201ENSMUST00000053253 2496 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Cdc40Q9DC48 Map9-201ENSMUST00000091014 6218 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Cdc40Q9DC48 Gm33326-201ENSMUST00000209741 3815 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Cdc40Q9DC48 Wdr66-207ENSMUST00000170536 3679 ntTSL 5 BASIC5.76□□□□□ -1.49
Cdc40Q9DC48 Golph3l-201ENSMUST00000060323 2652 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Cdc40Q9DC48 Olfr1275-202ENSMUST00000216421 2418 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Cdc40Q9DC48 Jade3-202ENSMUST00000115384 4866 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Cdc40Q9DC48 Gm45117-201ENSMUST00000207250 1774 ntBASIC5.76□□□□□ -1.49
Cdc40Q9DC48 Dgkb-203ENSMUST00000220990 4085 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Cdc40Q9DC48 Gm15901-201ENSMUST00000117663 941 ntBASIC5.76□□□□□ -1.49
Cdc40Q9DC48 Gm15781-201ENSMUST00000120216 323 ntBASIC5.76□□□□□ -1.49
Cdc40Q9DC48 Gm13740-201ENSMUST00000120590 310 ntBASIC5.76□□□□□ -1.49
Cdc40Q9DC48 AI646519-201ENSMUST00000140987 351 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Cdc40Q9DC48 Lrrc75aos1-201ENSMUST00000142492 779 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Cdc40Q9DC48 Rpl31-ps23-201ENSMUST00000180440 388 ntBASIC5.76□□□□□ -1.49
Cdc40Q9DC48 Gm21542-201ENSMUST00000182307 993 ntBASIC5.76□□□□□ -1.49
Cdc40Q9DC48 7630403G23Rik-201ENSMUST00000184229 1084 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Cdc40Q9DC48 Gm29234-201ENSMUST00000187452 1262 ntBASIC5.76□□□□□ -1.49
Cdc40Q9DC48 Gm37477-201ENSMUST00000195215 884 ntBASIC5.76□□□□□ -1.49
Cdc40Q9DC48 Gm4872-201ENSMUST00000205210 1299 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Cdc40Q9DC48 Gm35453-201ENSMUST00000210304 331 ntTSL 3 BASIC5.76□□□□□ -1.49
Cdc40Q9DC48 Gm33728-201ENSMUST00000217285 546 ntTSL 3 BASIC5.76□□□□□ -1.49
Cdc40Q9DC48 Gm19116-201ENSMUST00000218592 642 ntBASIC5.76□□□□□ -1.49
Cdc40Q9DC48 Gm4803-201ENSMUST00000218729 1279 ntBASIC5.76□□□□□ -1.49
Cdc40Q9DC48 AC167222.2-201ENSMUST00000220014 295 ntBASIC5.76□□□□□ -1.49
Cdc40Q9DC48 Gm9293-201ENSMUST00000223096 306 ntBASIC5.76□□□□□ -1.49
Cdc40Q9DC48 AC158521.1-202ENSMUST00000224352 645 ntBASIC5.76□□□□□ -1.49
Cdc40Q9DC48 9530002B09Rik-201ENSMUST00000024032 803 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Cdc40Q9DC48 Bpifa2-201ENSMUST00000048103 978 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Cdc40Q9DC48 Vmn1r234-201ENSMUST00000079633 990 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Cdc40Q9DC48 n-R5s58-201ENSMUST00000093682 119 ntBASIC5.76□□□□□ -1.49
Cdc40Q9DC48 Zbbx-204ENSMUST00000107778 2467 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
Cdc40Q9DC48 Gucy2f-201ENSMUST00000042530 8122 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Cdc40Q9DC48 Nxf7-202ENSMUST00000113163 2233 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Cdc40Q9DC48 Emcn-202ENSMUST00000122064 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Cdc40Q9DC48 AC140393.3-201ENSMUST00000228396 1352 ntBASIC5.76□□□□□ -1.49
Cdc40Q9DC48 Vmn2r-ps139-201ENSMUST00000190764 2057 ntBASIC5.76□□□□□ -1.49
Cdc40Q9DC48 Gm28475-201ENSMUST00000187645 1497 ntTSL 5 BASIC5.76□□□□□ -1.49
Cdc40Q9DC48 Gm38284-201ENSMUST00000194803 4539 ntBASIC5.76□□□□□ -1.49
Cdc40Q9DC48 Il18rap-201ENSMUST00000027237 4889 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Cdc40Q9DC48 Ipo11-205ENSMUST00000186033 4147 ntTSL 5 BASIC5.76□□□□□ -1.49
Cdc40Q9DC48 Tsga10-201ENSMUST00000041815 3400 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
Cdc40Q9DC48 Sorbs2-214ENSMUST00000134675 1692 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Cdc40Q9DC48 Atr-213ENSMUST00000215311 8102 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Cdc40Q9DC48 Slc17a2-201ENSMUST00000006786 4629 ntAPPRIS P2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Cdc40Q9DC48 Pter-203ENSMUST00000134794 3571 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Cdc40Q9DC48 2610044O15Rik8-202ENSMUST00000186619 2337 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
Cdc40Q9DC48 Nt5c3-202ENSMUST00000101367 1519 ntAPPRIS ALT1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Cdc40Q9DC48 Gm37911-201ENSMUST00000193099 1545 ntBASIC5.75□□□□□ -1.49
Cdc40Q9DC48 Olfr976-202ENSMUST00000213171 2998 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Cdc40Q9DC48 Zfp708-202ENSMUST00000109743 2536 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
Cdc40Q9DC48 Gm9602-201ENSMUST00000163325 2062 ntAPPRIS P5 TSL 1 (best) BASIC5.75□□□□□ -1.49
Cdc40Q9DC48 Gm8356-201ENSMUST00000163636 2062 ntAPPRIS P5 TSL 5 BASIC5.75□□□□□ -1.49
Cdc40Q9DC48 Gm44255-201ENSMUST00000203456 2053 ntBASIC5.75□□□□□ -1.49
Cdc40Q9DC48 Il21-201ENSMUST00000029273 3072 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
Cdc40Q9DC48 Gin1-202ENSMUST00000112842 1037 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Cdc40Q9DC48 Gm12040-201ENSMUST00000118357 537 ntBASIC5.75□□□□□ -1.49
Cdc40Q9DC48 Gm13702-201ENSMUST00000118542 825 ntBASIC5.75□□□□□ -1.49
Cdc40Q9DC48 Spink8-201ENSMUST00000118732 637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Cdc40Q9DC48 Gm13455-201ENSMUST00000118767 517 ntBASIC5.75□□□□□ -1.49
Cdc40Q9DC48 Gm11368-201ENSMUST00000139576 609 ntTSL 3 BASIC5.75□□□□□ -1.49
Cdc40Q9DC48 Gm25374-201ENSMUST00000158158 101 ntBASIC5.75□□□□□ -1.49
Cdc40Q9DC48 Gm24359-201ENSMUST00000158418 221 ntBASIC5.75□□□□□ -1.49
Cdc40Q9DC48 Gm8837-201ENSMUST00000161037 1107 ntBASIC5.75□□□□□ -1.49
Cdc40Q9DC48 Gm29586-201ENSMUST00000185225 1104 ntTSL 5 BASIC5.75□□□□□ -1.49
Cdc40Q9DC48 Gm28253-201ENSMUST00000186071 712 ntTSL 5 BASIC5.75□□□□□ -1.49
Cdc40Q9DC48 Gm28351-201ENSMUST00000186261 559 ntTSL 5 BASIC5.75□□□□□ -1.49
Cdc40Q9DC48 Gm29178-203ENSMUST00000186312 1104 ntTSL 5 BASIC5.75□□□□□ -1.49
Cdc40Q9DC48 Gm28501-201ENSMUST00000188729 421 ntTSL 2 BASIC5.75□□□□□ -1.49
Cdc40Q9DC48 1700108F19Rik-203ENSMUST00000188798 619 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Cdc40Q9DC48 Gm29624-202ENSMUST00000190185 1104 ntTSL 5 BASIC5.75□□□□□ -1.49
Cdc40Q9DC48 Gm29179-209ENSMUST00000190621 1100 ntTSL 5 BASIC5.75□□□□□ -1.49
Cdc40Q9DC48 1700108F19Rik-206ENSMUST00000191266 857 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Cdc40Q9DC48 Gm37511-201ENSMUST00000192901 294 ntBASIC5.75□□□□□ -1.49
Cdc40Q9DC48 Gm34768-201ENSMUST00000193884 565 ntBASIC5.75□□□□□ -1.49
Cdc40Q9DC48 Csn2-202ENSMUST00000196163 722 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
Cdc40Q9DC48 Gm33651-201ENSMUST00000200405 456 ntTSL 5 BASIC5.75□□□□□ -1.49
Cdc40Q9DC48 Gm3321-201ENSMUST00000200603 1129 ntBASIC5.75□□□□□ -1.49
Cdc40Q9DC48 Rpl7-ps7-201ENSMUST00000200912 799 ntBASIC5.75□□□□□ -1.49
Cdc40Q9DC48 Fxyd1-207ENSMUST00000205778 438 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.49
Cdc40Q9DC48 4930435C17Rik-202ENSMUST00000210759 974 ntTSL 5 BASIC5.75□□□□□ -1.49
Cdc40Q9DC48 AC166352.1-201ENSMUST00000215483 1105 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Cdc40Q9DC48 AC155941.3-201ENSMUST00000218476 308 ntBASIC5.75□□□□□ -1.49
Cdc40Q9DC48 4930543I11Rik-201ENSMUST00000219006 959 ntBASIC5.75□□□□□ -1.49
Cdc40Q9DC48 Ppp1r36-204ENSMUST00000220187 504 ntTSL 3 BASIC5.75□□□□□ -1.49
Cdc40Q9DC48 AC140930.1-201ENSMUST00000221889 389 ntBASIC5.75□□□□□ -1.49
Cdc40Q9DC48 Gm7557-201ENSMUST00000221935 865 ntBASIC5.75□□□□□ -1.49
Cdc40Q9DC48 AC164426.1-201ENSMUST00000225745 929 ntBASIC5.75□□□□□ -1.49
Cdc40Q9DC48 AC159979.1-201ENSMUST00000227927 342 ntBASIC5.75□□□□□ -1.49
Cdc40Q9DC48 Lcn9-201ENSMUST00000023978 839 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Cdc40Q9DC48 Snrpd1-201ENSMUST00000002551 837 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Cdc40Q9DC48 A530021J07Rik-201ENSMUST00000066005 414 ntTSL 3 BASIC5.75□□□□□ -1.49
Cdc40Q9DC48 Atf2-206ENSMUST00000112016 3943 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Cdc40Q9DC48 Vmn2r87-201ENSMUST00000164227 3036 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Cdc40Q9DC48 Tcf7-201ENSMUST00000086844 2471 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Cdc40Q9DC48 Gm12794-201ENSMUST00000052027 1452 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Cdc40Q9DC48 Taf7-201ENSMUST00000066272 3302 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Cdc40Q9DC48 Gm37725-201ENSMUST00000193965 2125 ntBASIC5.75□□□□□ -1.49
Cdc40Q9DC48 Sptlc3-202ENSMUST00000110083 2227 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms