Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm29508-202ENSMUST00000191414 710 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Smc1aQ9CU62 Gm38097-201ENSMUST00000192936 439 ntBASIC6.96□□□□□ -1.3
Smc1aQ9CU62 Cfhr2-202ENSMUST00000194186 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
Smc1aQ9CU62 Gm43241-201ENSMUST00000198375 364 ntTSL 3 BASIC6.96□□□□□ -1.3
Smc1aQ9CU62 Gm44206-201ENSMUST00000203044 592 ntTSL 5 BASIC6.96□□□□□ -1.3
Smc1aQ9CU62 Gm17918-201ENSMUST00000205315 574 ntBASIC6.96□□□□□ -1.3
Smc1aQ9CU62 Bpifa2-201ENSMUST00000048103 978 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Smc1aQ9CU62 Ccdc54-201ENSMUST00000062439 1296 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Smc1aQ9CU62 Gm9961-201ENSMUST00000068397 547 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Smc1aQ9CU62 n-R5s89-201ENSMUST00000083532 104 ntBASIC6.96□□□□□ -1.3
Smc1aQ9CU62 Prl2c3-201ENSMUST00000099805 857 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Smc1aQ9CU62 Oxr1-201ENSMUST00000022918 4232 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Smc1aQ9CU62 Vmn1r6-206ENSMUST00000227847 8073 ntAPPRIS P2 BASIC6.96□□□□□ -1.3
Smc1aQ9CU62 Olfr1273-ps-201ENSMUST00000214356 4698 ntAPPRIS P1 TSL 3 BASIC6.96□□□□□ -1.3
Smc1aQ9CU62 Dnah6-204ENSMUST00000204053 12435 ntAPPRIS P2 TSL 5 BASIC6.96□□□□□ -1.3
Smc1aQ9CU62 Olfr532-203ENSMUST00000213801 4232 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
Smc1aQ9CU62 Gm17435-201ENSMUST00000181452 2994 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Smc1aQ9CU62 Fap-209ENSMUST00000174448 2271 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
Smc1aQ9CU62 Il1b-201ENSMUST00000028881 1356 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Smc1aQ9CU62 1700024B05Rik-202ENSMUST00000168972 1573 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
Smc1aQ9CU62 Cdh17-202ENSMUST00000108303 3287 ntTSL 2 BASIC6.95□□□□□ -1.3
Smc1aQ9CU62 Olfr204-202ENSMUST00000216261 5371 ntAPPRIS P1 TSL 3 BASIC6.95□□□□□ -1.3
Smc1aQ9CU62 Gm10723-201ENSMUST00000195366 6918 ntBASIC6.95□□□□□ -1.3
Smc1aQ9CU62 Il7r-201ENSMUST00000003981 3540 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Smc1aQ9CU62 Gm9239-201ENSMUST00000186942 2557 ntBASIC6.95□□□□□ -1.3
Smc1aQ9CU62 Vwc2l-201ENSMUST00000053922 4655 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Smc1aQ9CU62 4930547M16Rik-201ENSMUST00000181590 2400 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Smc1aQ9CU62 Ppip5k2-205ENSMUST00000171129 3425 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Smc1aQ9CU62 Olfr358-201ENSMUST00000100146 1059 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Smc1aQ9CU62 Gstm7-202ENSMUST00000106687 743 ntTSL 3 BASIC6.95□□□□□ -1.3
Smc1aQ9CU62 Gm13265-201ENSMUST00000118090 421 ntBASIC6.95□□□□□ -1.3
Smc1aQ9CU62 Gm13702-201ENSMUST00000118542 825 ntBASIC6.95□□□□□ -1.3
Smc1aQ9CU62 Gm11976-201ENSMUST00000119236 295 ntBASIC6.95□□□□□ -1.3
Smc1aQ9CU62 Gm12262-201ENSMUST00000119915 305 ntBASIC6.95□□□□□ -1.3
Smc1aQ9CU62 Rps13-ps6-201ENSMUST00000120038 428 ntBASIC6.95□□□□□ -1.3
Smc1aQ9CU62 Gm13578-201ENSMUST00000120849 590 ntBASIC6.95□□□□□ -1.3
Smc1aQ9CU62 Gm12890-201ENSMUST00000120885 373 ntBASIC6.95□□□□□ -1.3
Smc1aQ9CU62 Gm14038-201ENSMUST00000121500 807 ntBASIC6.95□□□□□ -1.3
Smc1aQ9CU62 Gm16095-201ENSMUST00000128235 253 ntTSL 5 BASIC6.95□□□□□ -1.3
Smc1aQ9CU62 Gm16346-201ENSMUST00000129158 937 ntTSL 5 BASIC6.95□□□□□ -1.3
Smc1aQ9CU62 Gm13166-203ENSMUST00000144166 326 ntTSL 3 BASIC6.95□□□□□ -1.3
Smc1aQ9CU62 Gm15902-201ENSMUST00000146949 469 ntTSL 3 BASIC6.95□□□□□ -1.3
Smc1aQ9CU62 Gm25374-201ENSMUST00000158158 101 ntBASIC6.95□□□□□ -1.3
Smc1aQ9CU62 Glipr1-204ENSMUST00000162508 1183 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Smc1aQ9CU62 Esd-ps-201ENSMUST00000170684 847 ntBASIC6.95□□□□□ -1.3
Smc1aQ9CU62 Mir6348-201ENSMUST00000183804 120 ntBASIC6.95□□□□□ -1.3
Smc1aQ9CU62 Gm32950-201ENSMUST00000193336 232 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Smc1aQ9CU62 Slamf7-205ENSMUST00000194791 909 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Smc1aQ9CU62 C030018K13Rik-201ENSMUST00000196527 866 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Smc1aQ9CU62 Gm33651-201ENSMUST00000200405 456 ntTSL 5 BASIC6.95□□□□□ -1.3
Smc1aQ9CU62 Rpl7-ps7-201ENSMUST00000200912 799 ntBASIC6.95□□□□□ -1.3
Smc1aQ9CU62 Gm2040-201ENSMUST00000202979 289 ntBASIC6.95□□□□□ -1.3
Smc1aQ9CU62 Gm3266-201ENSMUST00000217832 591 ntBASIC6.95□□□□□ -1.3
Smc1aQ9CU62 Gm19116-201ENSMUST00000218592 642 ntBASIC6.95□□□□□ -1.3
Smc1aQ9CU62 AC147782.1-201ENSMUST00000219169 475 ntBASIC6.95□□□□□ -1.3
Smc1aQ9CU62 AC122327.2-201ENSMUST00000220883 120 ntBASIC6.95□□□□□ -1.3
Smc1aQ9CU62 AC122327.3-201ENSMUST00000221852 120 ntBASIC6.95□□□□□ -1.3
Smc1aQ9CU62 4933433N18Rik-201ENSMUST00000222134 1220 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Smc1aQ9CU62 AC166341.1-201ENSMUST00000223360 105 ntBASIC6.95□□□□□ -1.3
Smc1aQ9CU62 AC117769.2-201ENSMUST00000224612 469 ntBASIC6.95□□□□□ -1.3
Smc1aQ9CU62 AC105407.1-201ENSMUST00000225684 614 ntBASIC6.95□□□□□ -1.3
Smc1aQ9CU62 AC113125.2-201ENSMUST00000226837 362 ntBASIC6.95□□□□□ -1.3
Smc1aQ9CU62 Gm38414-201ENSMUST00000209819 1488 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Smc1aQ9CU62 4930519E07Rik-201ENSMUST00000200907 1665 ntBASIC6.95□□□□□ -1.3
Smc1aQ9CU62 Tmprss11a-201ENSMUST00000101073 2657 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Smc1aQ9CU62 Prrc2c-201ENSMUST00000028016 8815 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
Smc1aQ9CU62 D630023O14Rik-201ENSMUST00000191913 3099 ntBASIC6.95□□□□□ -1.3
Smc1aQ9CU62 Iqch-201ENSMUST00000042322 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Smc1aQ9CU62 Olfr281-202ENSMUST00000217517 4535 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Smc1aQ9CU62 Olfr1340-203ENSMUST00000216242 3341 ntAPPRIS P1 TSL 3 BASIC6.95□□□□□ -1.3
Smc1aQ9CU62 Gm36888-201ENSMUST00000195819 2945 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Smc1aQ9CU62 Hnrnpc-207ENSMUST00000227536 1301 ntBASIC6.95□□□□□ -1.3
Smc1aQ9CU62 Npy2r-201ENSMUST00000029633 3364 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
Smc1aQ9CU62 Vmn1r51-202ENSMUST00000174204 4025 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Smc1aQ9CU62 A730020M07Rik-202ENSMUST00000196621 2370 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Smc1aQ9CU62 Mtus1-203ENSMUST00000093534 4148 ntAPPRIS P4 TSL 1 (best) BASIC6.95□□□□□ -1.3
Smc1aQ9CU62 Tmem74-201ENSMUST00000067469 3528 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Smc1aQ9CU62 Sult1c2-201ENSMUST00000023886 1846 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Smc1aQ9CU62 Gm44220-201ENSMUST00000203784 2487 ntBASIC6.94□□□□□ -1.3
Smc1aQ9CU62 Kif27-201ENSMUST00000043605 4462 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Smc1aQ9CU62 Gm45752-201ENSMUST00000212917 3186 ntTSL 5 BASIC6.94□□□□□ -1.3
Smc1aQ9CU62 Gm13872-202ENSMUST00000143995 1408 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Smc1aQ9CU62 Gm14635-202ENSMUST00000146535 1409 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Smc1aQ9CU62 Lrrc3b-202ENSMUST00000163937 1424 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Smc1aQ9CU62 Prg4-208ENSMUST00000164600 4263 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Smc1aQ9CU62 Gm28112-201ENSMUST00000190898 1875 ntBASIC6.94□□□□□ -1.3
Smc1aQ9CU62 9330178D15Rik-201ENSMUST00000196033 3451 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Smc1aQ9CU62 Gm37943-201ENSMUST00000194053 3944 ntBASIC6.94□□□□□ -1.3
Smc1aQ9CU62 Asb15-202ENSMUST00000117688 4371 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Smc1aQ9CU62 Olfr1204-202ENSMUST00000213283 6935 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Smc1aQ9CU62 Rnf145-202ENSMUST00000101327 4214 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Smc1aQ9CU62 Gm12169-201ENSMUST00000109228 1065 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Smc1aQ9CU62 4930503H13Rik-201ENSMUST00000118320 725 ntBASIC6.94□□□□□ -1.3
Smc1aQ9CU62 Gm13338-201ENSMUST00000120235 361 ntBASIC6.94□□□□□ -1.3
Smc1aQ9CU62 Gm12618-201ENSMUST00000121754 483 ntBASIC6.94□□□□□ -1.3
Smc1aQ9CU62 Gm16196-201ENSMUST00000137730 464 ntTSL 3 BASIC6.94□□□□□ -1.3
Smc1aQ9CU62 Gm22530-201ENSMUST00000158820 118 ntBASIC6.94□□□□□ -1.3
Smc1aQ9CU62 Gm7008-203ENSMUST00000171356 476 ntTSL 2 BASIC6.94□□□□□ -1.3
Smc1aQ9CU62 Gm20475-201ENSMUST00000174884 263 ntTSL 3 BASIC6.94□□□□□ -1.3
Smc1aQ9CU62 Gm25025-201ENSMUST00000175018 111 ntBASIC6.94□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms