Protein–RNA interactions for Protein: Q8K2Z2

Prpf39, Pre-mRNA-processing factor 39, mousemouse

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf39Q8K2Z2 Gm11609-201ENSMUST00000121926 793 ntBASIC6.39□□□□□ -1.39
Prpf39Q8K2Z2 Gstm2-201ENSMUST00000012348 1064 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Prpf39Q8K2Z2 Gm15787-206ENSMUST00000141008 585 ntTSL 2 BASIC6.39□□□□□ -1.39
Prpf39Q8K2Z2 Gm14325-202ENSMUST00000150650 310 ntTSL 2 BASIC6.39□□□□□ -1.39
Prpf39Q8K2Z2 Gm25219-201ENSMUST00000157545 330 ntBASIC6.39□□□□□ -1.39
Prpf39Q8K2Z2 Gm3159-201ENSMUST00000164038 997 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
Prpf39Q8K2Z2 Wfdc15b-203ENSMUST00000164567 497 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
Prpf39Q8K2Z2 Gm3127-201ENSMUST00000167839 997 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
Prpf39Q8K2Z2 Rps12-ps13-201ENSMUST00000178365 399 ntBASIC6.39□□□□□ -1.39
Prpf39Q8K2Z2 Rps12-ps11-201ENSMUST00000178427 399 ntBASIC6.39□□□□□ -1.39
Prpf39Q8K2Z2 1700003H04Rik-203ENSMUST00000178485 761 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Prpf39Q8K2Z2 Rps12-ps12-201ENSMUST00000179020 399 ntBASIC6.39□□□□□ -1.39
Prpf39Q8K2Z2 Rps12-ps17-201ENSMUST00000179067 399 ntBASIC6.39□□□□□ -1.39
Prpf39Q8K2Z2 Rps12-ps6-201ENSMUST00000179239 399 ntBASIC6.39□□□□□ -1.39
Prpf39Q8K2Z2 Rps12-ps14-201ENSMUST00000179356 399 ntBASIC6.39□□□□□ -1.39
Prpf39Q8K2Z2 Rps12-ps18-201ENSMUST00000179420 399 ntBASIC6.39□□□□□ -1.39
Prpf39Q8K2Z2 Rps12-ps15-201ENSMUST00000179567 399 ntBASIC6.39□□□□□ -1.39
Prpf39Q8K2Z2 Rps12l1-201ENSMUST00000183090 399 ntBASIC6.39□□□□□ -1.39
Prpf39Q8K2Z2 Gm27252-201ENSMUST00000183782 689 ntTSL 5 BASIC6.39□□□□□ -1.39
Prpf39Q8K2Z2 Gm27348-201ENSMUST00000184511 170 ntBASIC6.39□□□□□ -1.39
Prpf39Q8K2Z2 Gm29111-201ENSMUST00000188823 696 ntBASIC6.39□□□□□ -1.39
Prpf39Q8K2Z2 4933404I11Rik-201ENSMUST00000190294 1202 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Prpf39Q8K2Z2 1700108F19Rik-207ENSMUST00000191384 210 ntTSL 3 BASIC6.39□□□□□ -1.39
Prpf39Q8K2Z2 Gm28777-201ENSMUST00000191402 535 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Prpf39Q8K2Z2 Gm28584-201ENSMUST00000191489 696 ntBASIC6.39□□□□□ -1.39
Prpf39Q8K2Z2 Gm37784-201ENSMUST00000193233 189 ntBASIC6.39□□□□□ -1.39
Prpf39Q8K2Z2 Gm38138-201ENSMUST00000193274 696 ntBASIC6.39□□□□□ -1.39
Prpf39Q8K2Z2 A330069K06Rik-201ENSMUST00000194077 917 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Prpf39Q8K2Z2 Gm37991-201ENSMUST00000194297 696 ntBASIC6.39□□□□□ -1.39
Prpf39Q8K2Z2 AC099760.1-201ENSMUST00000196300 153 ntBASIC6.39□□□□□ -1.39
Prpf39Q8K2Z2 Gm43391-203ENSMUST00000198110 1001 ntTSL 5 BASIC6.39□□□□□ -1.39
Prpf39Q8K2Z2 Gm43772-201ENSMUST00000202052 379 ntBASIC6.39□□□□□ -1.39
Prpf39Q8K2Z2 Gm5318-201ENSMUST00000205249 406 ntBASIC6.39□□□□□ -1.39
Prpf39Q8K2Z2 Gm5027-201ENSMUST00000206700 375 ntBASIC6.39□□□□□ -1.39
Prpf39Q8K2Z2 Smarca2-231ENSMUST00000208091 1140 ntTSL 5 BASIC6.39□□□□□ -1.39
Prpf39Q8K2Z2 AC166352.1-201ENSMUST00000215483 1105 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Prpf39Q8K2Z2 1190001M18Rik-201ENSMUST00000215937 1270 ntBASIC6.39□□□□□ -1.39
Prpf39Q8K2Z2 AC155941.3-201ENSMUST00000218476 308 ntBASIC6.39□□□□□ -1.39
Prpf39Q8K2Z2 AC154219.1-201ENSMUST00000220764 1262 ntBASIC6.39□□□□□ -1.39
Prpf39Q8K2Z2 Gm3785-201ENSMUST00000221000 202 ntBASIC6.39□□□□□ -1.39
Prpf39Q8K2Z2 CT010431.1-201ENSMUST00000221249 1080 ntBASIC6.39□□□□□ -1.39
Prpf39Q8K2Z2 Gm2614-201ENSMUST00000223227 403 ntBASIC6.39□□□□□ -1.39
Prpf39Q8K2Z2 AC154718.1-201ENSMUST00000226676 250 ntBASIC6.39□□□□□ -1.39
Prpf39Q8K2Z2 Tas2r119-201ENSMUST00000057633 1006 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Prpf39Q8K2Z2 Olfr1441-201ENSMUST00000059033 1088 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Prpf39Q8K2Z2 Eri2-202ENSMUST00000063902 1241 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Prpf39Q8K2Z2 Olfr365-201ENSMUST00000074168 939 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Prpf39Q8K2Z2 Mir194-1-201ENSMUST00000083647 67 ntBASIC6.39□□□□□ -1.39
Prpf39Q8K2Z2 Rpl29-202ENSMUST00000098994 583 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
Prpf39Q8K2Z2 Olfr1275-201ENSMUST00000099620 1020 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Prpf39Q8K2Z2 Skil-204ENSMUST00000118470 6578 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Prpf39Q8K2Z2 AC166358.5-201ENSMUST00000220706 1302 ntBASIC6.39□□□□□ -1.39
Prpf39Q8K2Z2 Otc-201ENSMUST00000049910 2319 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Prpf39Q8K2Z2 Gm12057-201ENSMUST00000117244 1427 ntBASIC6.39□□□□□ -1.39
Prpf39Q8K2Z2 Gm5949-201ENSMUST00000213468 1421 ntBASIC6.39□□□□□ -1.39
Prpf39Q8K2Z2 Gm42607-201ENSMUST00000200221 3393 ntBASIC6.39□□□□□ -1.39
Prpf39Q8K2Z2 AC121960.2-201ENSMUST00000227349 3446 ntBASIC6.39□□□□□ -1.39
Prpf39Q8K2Z2 Gm21122-201ENSMUST00000191548 3452 ntBASIC6.39□□□□□ -1.39
Prpf39Q8K2Z2 Vmn1r86-204ENSMUST00000227700 5487 ntAPPRIS ALT2 BASIC6.39□□□□□ -1.39
Prpf39Q8K2Z2 Nt5c3-202ENSMUST00000101367 1519 ntAPPRIS ALT1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Prpf39Q8K2Z2 Zranb2-202ENSMUST00000106057 2737 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
Prpf39Q8K2Z2 Stra6l-202ENSMUST00000107782 4009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Prpf39Q8K2Z2 Gm9938-201ENSMUST00000067077 1756 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Prpf39Q8K2Z2 Gm43425-201ENSMUST00000201793 3291 ntBASIC6.38□□□□□ -1.39
Prpf39Q8K2Z2 Vmn1r39-208ENSMUST00000228919 2105 ntAPPRIS ALT2 BASIC6.38□□□□□ -1.39
Prpf39Q8K2Z2 Ncf2-202ENSMUST00000186568 3550 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Prpf39Q8K2Z2 Cd274-201ENSMUST00000016640 3622 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Prpf39Q8K2Z2 Specc1-217ENSMUST00000202905 3841 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Prpf39Q8K2Z2 Sgms1-209ENSMUST00000142618 4036 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Prpf39Q8K2Z2 Tcf7-201ENSMUST00000086844 2471 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Prpf39Q8K2Z2 Olfr537-ps1-202ENSMUST00000210949 2821 ntAPPRIS P1 TSL 3 BASIC6.38□□□□□ -1.39
Prpf39Q8K2Z2 Nsun6-208ENSMUST00000195749 3149 ntAPPRIS P3 TSL 5 BASIC6.38□□□□□ -1.39
Prpf39Q8K2Z2 Ercc6l-201ENSMUST00000056904 5302 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Prpf39Q8K2Z2 Gm12018-201ENSMUST00000150694 3375 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Prpf39Q8K2Z2 Dock2-203ENSMUST00000101365 3785 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Prpf39Q8K2Z2 Gm15293-201ENSMUST00000110754 418 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Prpf39Q8K2Z2 A730017C20Rik-203ENSMUST00000118510 785 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
Prpf39Q8K2Z2 Gm14331-201ENSMUST00000120396 409 ntBASIC6.38□□□□□ -1.39
Prpf39Q8K2Z2 Gm11292-201ENSMUST00000146121 1153 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Prpf39Q8K2Z2 Gm15956-201ENSMUST00000153352 502 ntTSL 2 BASIC6.38□□□□□ -1.39
Prpf39Q8K2Z2 Gm16028-201ENSMUST00000162347 890 ntTSL 5 BASIC6.38□□□□□ -1.39
Prpf39Q8K2Z2 Vmn1r-ps12-201ENSMUST00000176946 502 ntBASIC6.38□□□□□ -1.39
Prpf39Q8K2Z2 Gm18006-201ENSMUST00000177411 662 ntBASIC6.38□□□□□ -1.39
Prpf39Q8K2Z2 Zfp87-202ENSMUST00000181341 480 ntTSL 3 BASIC6.38□□□□□ -1.39
Prpf39Q8K2Z2 1700029M03Rik-202ENSMUST00000187517 357 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Prpf39Q8K2Z2 1700108F19Rik-206ENSMUST00000191266 857 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Prpf39Q8K2Z2 Gm28086-201ENSMUST00000191586 317 ntTSL 5 BASIC6.38□□□□□ -1.39
Prpf39Q8K2Z2 Gm43470-201ENSMUST00000196175 454 ntTSL 5 BASIC6.38□□□□□ -1.39
Prpf39Q8K2Z2 Gm39119-201ENSMUST00000208466 951 ntTSL 5 BASIC6.38□□□□□ -1.39
Prpf39Q8K2Z2 Gm45326-201ENSMUST00000209234 721 ntTSL 3 BASIC6.38□□□□□ -1.39
Prpf39Q8K2Z2 Erc2-213ENSMUST00000211684 1074 ntTSL 5 BASIC6.38□□□□□ -1.39
Prpf39Q8K2Z2 AC108846.2-201ENSMUST00000214925 731 ntTSL 5 BASIC6.38□□□□□ -1.39
Prpf39Q8K2Z2 Olfr19-201ENSMUST00000057886 1142 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Prpf39Q8K2Z2 Olfr266-201ENSMUST00000059486 1027 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Prpf39Q8K2Z2 Gm26707-201ENSMUST00000181552 3902 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Prpf39Q8K2Z2 Nmrk1-201ENSMUST00000042392 1357 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Prpf39Q8K2Z2 Olfr726-207ENSMUST00000217319 1419 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Prpf39Q8K2Z2 Sirpb1c-201ENSMUST00000050623 1499 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Prpf39Q8K2Z2 4933409F18Rik-202ENSMUST00000222026 1584 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Prpf39Q8K2Z2 B020004J07Rik-201ENSMUST00000084386 1695 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms