Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 1700108F19Rik-206ENSMUST00000191266 857 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Brf1Q8CFK2 Gm5694-201ENSMUST00000195648 641 ntBASIC7.47□□□□□ -1.21
Brf1Q8CFK2 Gm43762-201ENSMUST00000201521 295 ntBASIC7.47□□□□□ -1.21
Brf1Q8CFK2 Gm30498-201ENSMUST00000204033 615 ntTSL 5 BASIC7.47□□□□□ -1.21
Brf1Q8CFK2 Gm4265-201ENSMUST00000206701 674 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Brf1Q8CFK2 AC153528.1-201ENSMUST00000217696 434 ntTSL 3 BASIC7.47□□□□□ -1.21
Brf1Q8CFK2 AC151904.3-201ENSMUST00000219266 895 ntBASIC7.47□□□□□ -1.21
Brf1Q8CFK2 Gm36607-201ENSMUST00000222750 1087 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Brf1Q8CFK2 Gm2614-201ENSMUST00000223227 403 ntBASIC7.47□□□□□ -1.21
Brf1Q8CFK2 Olfr196-201ENSMUST00000077027 930 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
Brf1Q8CFK2 Tcf7-201ENSMUST00000086844 2471 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Brf1Q8CFK2 Slc17a4-201ENSMUST00000021769 1604 ntAPPRIS P2 TSL 5 BASIC7.47□□□□□ -1.21
Brf1Q8CFK2 A930006L05Rik-201ENSMUST00000186821 2814 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Brf1Q8CFK2 Sirpb1c-201ENSMUST00000050623 1499 ntAPPRIS P2 TSL 1 (best) BASIC7.47□□□□□ -1.21
Brf1Q8CFK2 Ctsm-201ENSMUST00000099451 1457 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Brf1Q8CFK2 Olfr20-202ENSMUST00000120137 2390 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
Brf1Q8CFK2 Gm44697-201ENSMUST00000207756 1679 ntBASIC7.47□□□□□ -1.21
Brf1Q8CFK2 AC103672.2-201ENSMUST00000228146 1687 ntBASIC7.47□□□□□ -1.21
Brf1Q8CFK2 Sntg1-210ENSMUST00000191683 4510 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Brf1Q8CFK2 Olfr1346-203ENSMUST00000215302 4525 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
Brf1Q8CFK2 Hivep3-202ENSMUST00000106307 11838 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Brf1Q8CFK2 AC123629.1-201ENSMUST00000225669 1364 ntBASIC7.46□□□□□ -1.21
Brf1Q8CFK2 Utrn-201ENSMUST00000076817 12382 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
Brf1Q8CFK2 Vmn1r39-208ENSMUST00000228919 2105 ntAPPRIS ALT2 BASIC7.46□□□□□ -1.21
Brf1Q8CFK2 Gm20300-201ENSMUST00000214634 3440 ntBASIC7.46□□□□□ -1.21
Brf1Q8CFK2 Poln-201ENSMUST00000042954 2897 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.21
Brf1Q8CFK2 Cyp2c29-202ENSMUST00000176624 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.21
Brf1Q8CFK2 AC155298.1-201ENSMUST00000225350 3250 ntBASIC7.46□□□□□ -1.21
Brf1Q8CFK2 Adgrl3-203ENSMUST00000117253 4764 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
Brf1Q8CFK2 Gm31121-201ENSMUST00000197948 1413 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
Brf1Q8CFK2 Mgam2-ps-201ENSMUST00000195870 3745 ntBASIC7.46□□□□□ -1.21
Brf1Q8CFK2 Vmn1r52-206ENSMUST00000228385 2769 ntBASIC7.46□□□□□ -1.21
Brf1Q8CFK2 Gm15228-201ENSMUST00000142044 3440 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Brf1Q8CFK2 Eri2-203ENSMUST00000106523 973 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Brf1Q8CFK2 Gm10999-201ENSMUST00000108743 207 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
Brf1Q8CFK2 Gm14510-201ENSMUST00000116165 1092 ntBASIC7.46□□□□□ -1.22
Brf1Q8CFK2 Gm14606-201ENSMUST00000117078 1155 ntBASIC7.46□□□□□ -1.22
Brf1Q8CFK2 Gm11987-201ENSMUST00000118524 381 ntBASIC7.46□□□□□ -1.22
Brf1Q8CFK2 1700057H15Rik-201ENSMUST00000127913 595 ntTSL 3 BASIC7.46□□□□□ -1.22
Brf1Q8CFK2 Gm15471-201ENSMUST00000145893 625 ntTSL 2 BASIC7.46□□□□□ -1.22
Brf1Q8CFK2 Gm16062-201ENSMUST00000151825 771 ntTSL 2 BASIC7.46□□□□□ -1.22
Brf1Q8CFK2 Scnm1-202ENSMUST00000173462 666 ntAPPRIS P1 TSL 2 BASIC7.46□□□□□ -1.22
Brf1Q8CFK2 n-R5s209-201ENSMUST00000179494 119 ntBASIC7.46□□□□□ -1.22
Brf1Q8CFK2 Rpl31-ps23-201ENSMUST00000180440 388 ntBASIC7.46□□□□□ -1.22
Brf1Q8CFK2 Gm26722-201ENSMUST00000181237 1048 ntTSL 5 BASIC7.46□□□□□ -1.22
Brf1Q8CFK2 Gm29234-201ENSMUST00000187452 1262 ntBASIC7.46□□□□□ -1.22
Brf1Q8CFK2 Gm28586-201ENSMUST00000189857 456 ntBASIC7.46□□□□□ -1.22
Brf1Q8CFK2 Gm28510-201ENSMUST00000190572 928 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Brf1Q8CFK2 Gm17934-201ENSMUST00000192818 422 ntBASIC7.46□□□□□ -1.22
Brf1Q8CFK2 Gm37072-201ENSMUST00000194570 837 ntBASIC7.46□□□□□ -1.22
Brf1Q8CFK2 C030018K13Rik-201ENSMUST00000196527 866 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Brf1Q8CFK2 Gm43233-201ENSMUST00000200491 616 ntBASIC7.46□□□□□ -1.22
Brf1Q8CFK2 Gm44442-201ENSMUST00000204298 422 ntTSL 3 BASIC7.46□□□□□ -1.22
Brf1Q8CFK2 Olfr1439-ps1-201ENSMUST00000207089 824 ntBASIC7.46□□□□□ -1.22
Brf1Q8CFK2 Gm44984-201ENSMUST00000207802 394 ntBASIC7.46□□□□□ -1.22
Brf1Q8CFK2 Gm45044-201ENSMUST00000208078 396 ntTSL 5 BASIC7.46□□□□□ -1.22
Brf1Q8CFK2 Erc2-213ENSMUST00000211684 1074 ntTSL 5 BASIC7.46□□□□□ -1.22
Brf1Q8CFK2 Gm3266-201ENSMUST00000217832 591 ntBASIC7.46□□□□□ -1.22
Brf1Q8CFK2 CT010575.2-201ENSMUST00000222876 496 ntTSL 2 BASIC7.46□□□□□ -1.22
Brf1Q8CFK2 AC132881.2-201ENSMUST00000225474 709 ntBASIC7.46□□□□□ -1.22
Brf1Q8CFK2 AC133203.1-201ENSMUST00000228241 301 ntBASIC7.46□□□□□ -1.22
Brf1Q8CFK2 Eri2-202ENSMUST00000063902 1241 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Brf1Q8CFK2 Vmn1r11-201ENSMUST00000071304 900 ntAPPRIS P2 BASIC7.46□□□□□ -1.22
Brf1Q8CFK2 Gm23058-201ENSMUST00000093703 107 ntBASIC7.46□□□□□ -1.22
Brf1Q8CFK2 Olfr1312-201ENSMUST00000099600 954 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
Brf1Q8CFK2 Cd209a-201ENSMUST00000012847 1482 ntAPPRIS P2 TSL 1 (best) BASIC7.46□□□□□ -1.22
Brf1Q8CFK2 Olfr114-203ENSMUST00000216249 1457 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
Brf1Q8CFK2 Vmn1r8-203ENSMUST00000228690 1699 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
Brf1Q8CFK2 Smgc-202ENSMUST00000100293 2878 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.22
Brf1Q8CFK2 Nlrp10-201ENSMUST00000055745 4504 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Brf1Q8CFK2 Bbx-201ENSMUST00000066037 4523 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Brf1Q8CFK2 Gm10826-201ENSMUST00000215366 3304 ntBASIC7.46□□□□□ -1.22
Brf1Q8CFK2 Rfc1-206ENSMUST00000204965 4751 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.22
Brf1Q8CFK2 Fanci-201ENSMUST00000036865 4645 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
Brf1Q8CFK2 Gm37894-201ENSMUST00000195416 2599 ntBASIC7.46□□□□□ -1.22
Brf1Q8CFK2 Gm44440-201ENSMUST00000203139 2373 ntBASIC7.46□□□□□ -1.22
Brf1Q8CFK2 Gm37100-201ENSMUST00000193344 1353 ntBASIC7.46□□□□□ -1.22
Brf1Q8CFK2 Gm36947-201ENSMUST00000194709 2249 ntBASIC7.46□□□□□ -1.22
Brf1Q8CFK2 Zranb2-202ENSMUST00000106057 2737 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
Brf1Q8CFK2 Gm37531-201ENSMUST00000191628 5415 ntBASIC7.45□□□□□ -1.22
Brf1Q8CFK2 Pja2-202ENSMUST00000024889 4345 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
Brf1Q8CFK2 Gm12043-201ENSMUST00000131570 2788 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Brf1Q8CFK2 B3gnt5-203ENSMUST00000121344 4175 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Brf1Q8CFK2 Zfp2-202ENSMUST00000109129 2803 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Brf1Q8CFK2 Lrrc37a-201ENSMUST00000153273 9647 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
Brf1Q8CFK2 Gm37206-201ENSMUST00000195512 3069 ntBASIC7.45□□□□□ -1.22
Brf1Q8CFK2 Gm20877-201ENSMUST00000100105 1212 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
Brf1Q8CFK2 Skint1-201ENSMUST00000117379 875 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
Brf1Q8CFK2 Mageb16-ps1-201ENSMUST00000117991 1127 ntBASIC7.45□□□□□ -1.22
Brf1Q8CFK2 Gm15719-201ENSMUST00000120619 635 ntBASIC7.45□□□□□ -1.22
Brf1Q8CFK2 Gm14092-201ENSMUST00000136794 617 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Brf1Q8CFK2 Skint1-203ENSMUST00000161389 960 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
Brf1Q8CFK2 Wfdc15b-203ENSMUST00000164567 497 ntAPPRIS P1 TSL 2 BASIC7.45□□□□□ -1.22
Brf1Q8CFK2 Gm6918-201ENSMUST00000167622 1222 ntBASIC7.45□□□□□ -1.22
Brf1Q8CFK2 Gm17198-201ENSMUST00000171792 1154 ntBASIC7.45□□□□□ -1.22
Brf1Q8CFK2 Vmn2r-ps64-201ENSMUST00000173690 523 ntBASIC7.45□□□□□ -1.22
Brf1Q8CFK2 Gm20917-201ENSMUST00000179922 990 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
Brf1Q8CFK2 Gm26895-201ENSMUST00000181295 619 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Brf1Q8CFK2 1810026B05Rik-201ENSMUST00000183916 432 ntTSL 3 BASIC7.45□□□□□ -1.22
Brf1Q8CFK2 Gm28156-201ENSMUST00000187880 1136 ntTSL 5 BASIC7.45□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 96.9 ms