Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Gm10693-202ENSMUST00000205904 4007 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Lrif1Q8CDD9 Gm17275-201ENSMUST00000181811 2550 ntTSL 5 BASIC6.04□□□□□ -1.44
Lrif1Q8CDD9 9830144P21Rik-202ENSMUST00000127525 3362 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Lrif1Q8CDD9 Ppp2r3a-201ENSMUST00000066773 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Lrif1Q8CDD9 E330013P04Rik-201ENSMUST00000065383 2070 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Lrif1Q8CDD9 Gm25564-201ENSMUST00000104604 132 ntBASIC6.04□□□□□ -1.44
Lrif1Q8CDD9 Gm11504-201ENSMUST00000120211 173 ntBASIC6.04□□□□□ -1.44
Lrif1Q8CDD9 Gm3810-201ENSMUST00000122413 476 ntBASIC6.04□□□□□ -1.44
Lrif1Q8CDD9 Gm23426-201ENSMUST00000122483 318 ntBASIC6.04□□□□□ -1.44
Lrif1Q8CDD9 Gm16249-201ENSMUST00000124055 1258 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Lrif1Q8CDD9 Gm25550-201ENSMUST00000158079 128 ntBASIC6.04□□□□□ -1.44
Lrif1Q8CDD9 Gm26037-201ENSMUST00000158150 311 ntBASIC6.04□□□□□ -1.44
Lrif1Q8CDD9 Gm16132-201ENSMUST00000159296 598 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Lrif1Q8CDD9 4430402I18Rik-206ENSMUST00000164777 1066 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Lrif1Q8CDD9 Gm20530-201ENSMUST00000174261 254 ntBASIC6.04□□□□□ -1.44
Lrif1Q8CDD9 1600029O15Rik-201ENSMUST00000178259 517 ntBASIC6.04□□□□□ -1.44
Lrif1Q8CDD9 Gm43576-201ENSMUST00000197937 871 ntBASIC6.04□□□□□ -1.44
Lrif1Q8CDD9 Gm43743-202ENSMUST00000198353 491 ntBASIC6.04□□□□□ -1.44
Lrif1Q8CDD9 Gm44020-201ENSMUST00000204618 664 ntTSL 3 BASIC6.04□□□□□ -1.44
Lrif1Q8CDD9 Gm44788-201ENSMUST00000207605 385 ntTSL 5 BASIC6.04□□□□□ -1.44
Lrif1Q8CDD9 AC159896.3-201ENSMUST00000215904 3835 ntBASIC6.04□□□□□ -1.44
Lrif1Q8CDD9 AC154806.1-203ENSMUST00000227370 1032 ntBASIC6.04□□□□□ -1.44
Lrif1Q8CDD9 Bpifa2-201ENSMUST00000048103 978 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Lrif1Q8CDD9 Gm6563-201ENSMUST00000056396 869 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Lrif1Q8CDD9 Olfr1404-201ENSMUST00000056592 1034 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Lrif1Q8CDD9 Olfr19-201ENSMUST00000057886 1142 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Lrif1Q8CDD9 Olfr930-201ENSMUST00000058789 1101 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Lrif1Q8CDD9 Olfr376-201ENSMUST00000078952 1210 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
Lrif1Q8CDD9 Ctla4-202ENSMUST00000097720 614 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
Lrif1Q8CDD9 Herc2-203ENSMUST00000205303 14403 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
Lrif1Q8CDD9 CT025686.2-201ENSMUST00000227898 3315 ntBASIC6.04□□□□□ -1.44
Lrif1Q8CDD9 Cbll1-203ENSMUST00000101499 3900 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Lrif1Q8CDD9 AC132852.2-201ENSMUST00000216052 2794 ntBASIC6.04□□□□□ -1.44
Lrif1Q8CDD9 Gm3278-201ENSMUST00000164459 1500 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Lrif1Q8CDD9 Gm37262-201ENSMUST00000192816 1818 ntBASIC6.04□□□□□ -1.44
Lrif1Q8CDD9 F930017D23Rik-201ENSMUST00000099888 1836 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Lrif1Q8CDD9 Cx3cr1-202ENSMUST00000177637 3156 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Lrif1Q8CDD9 Dnah2-201ENSMUST00000035539 13569 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
Lrif1Q8CDD9 Clock-204ENSMUST00000202122 5508 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Lrif1Q8CDD9 Gm45311-201ENSMUST00000211086 1330 ntBASIC6.03□□□□□ -1.44
Lrif1Q8CDD9 Olfr453-202ENSMUST00000213997 3082 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Lrif1Q8CDD9 Ddx4-201ENSMUST00000075748 2762 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
Lrif1Q8CDD9 Tead1-202ENSMUST00000069256 9480 ntAPPRIS ALT1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Lrif1Q8CDD9 Gm43523-201ENSMUST00000197397 2878 ntBASIC6.03□□□□□ -1.44
Lrif1Q8CDD9 Gm16344-201ENSMUST00000150084 1567 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Lrif1Q8CDD9 Gm38137-201ENSMUST00000193735 1401 ntBASIC6.03□□□□□ -1.44
Lrif1Q8CDD9 Catsperg2-201ENSMUST00000061193 3957 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Lrif1Q8CDD9 Gm26422-201ENSMUST00000104276 132 ntBASIC6.03□□□□□ -1.44
Lrif1Q8CDD9 Gm14733-201ENSMUST00000117680 133 ntBASIC6.03□□□□□ -1.44
Lrif1Q8CDD9 Gm13176-201ENSMUST00000117910 477 ntBASIC6.03□□□□□ -1.44
Lrif1Q8CDD9 Gm8312-201ENSMUST00000119380 618 ntBASIC6.03□□□□□ -1.44
Lrif1Q8CDD9 Gm2986-201ENSMUST00000121603 382 ntBASIC6.03□□□□□ -1.44
Lrif1Q8CDD9 Rps19-ps14-201ENSMUST00000121832 269 ntBASIC6.03□□□□□ -1.44
Lrif1Q8CDD9 Gm4764-201ENSMUST00000130207 1233 ntBASIC6.03□□□□□ -1.44
Lrif1Q8CDD9 Gm16152-201ENSMUST00000131663 872 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Lrif1Q8CDD9 Gm14092-201ENSMUST00000136794 617 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Lrif1Q8CDD9 Gm13598-201ENSMUST00000147939 625 ntTSL 5 BASIC6.03□□□□□ -1.44
Lrif1Q8CDD9 Vmn1r-ps80-201ENSMUST00000174838 966 ntBASIC6.03□□□□□ -1.44
Lrif1Q8CDD9 Cd68-201ENSMUST00000018918 1230 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Lrif1Q8CDD9 Gm37867-201ENSMUST00000192066 1059 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Lrif1Q8CDD9 Gm38237-201ENSMUST00000193366 376 ntBASIC6.03□□□□□ -1.44
Lrif1Q8CDD9 Gm37220-201ENSMUST00000195179 415 ntTSL 5 BASIC6.03□□□□□ -1.44
Lrif1Q8CDD9 AC122844.1-201ENSMUST00000195971 107 ntBASIC6.03□□□□□ -1.44
Lrif1Q8CDD9 Gm43842-201ENSMUST00000202890 2982 ntBASIC6.03□□□□□ -1.44
Lrif1Q8CDD9 Gm32591-202ENSMUST00000204063 403 ntTSL 3 BASIC6.03□□□□□ -1.44
Lrif1Q8CDD9 Usf2-ps1-201ENSMUST00000206657 311 ntBASIC6.03□□□□□ -1.44
Lrif1Q8CDD9 Gm5324-201ENSMUST00000208115 476 ntBASIC6.03□□□□□ -1.44
Lrif1Q8CDD9 Gm32983-201ENSMUST00000208500 505 ntBASIC6.03□□□□□ -1.44
Lrif1Q8CDD9 Nqo2-201ENSMUST00000021843 1063 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Lrif1Q8CDD9 Anxa13-202ENSMUST00000227274 1201 ntBASIC6.03□□□□□ -1.44
Lrif1Q8CDD9 Emc2-201ENSMUST00000022962 1231 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Lrif1Q8CDD9 Zfp865-202ENSMUST00000076791 1129 ntBASIC6.03□□□□□ -1.44
Lrif1Q8CDD9 Olfr149-201ENSMUST00000082027 1030 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Lrif1Q8CDD9 Olfr1312-201ENSMUST00000099600 954 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Lrif1Q8CDD9 Rad21l-201ENSMUST00000096439 1650 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
Lrif1Q8CDD9 Agbl2-202ENSMUST00000037219 3462 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Lrif1Q8CDD9 Gm40770-201ENSMUST00000220040 1502 ntTSL 5 BASIC6.03□□□□□ -1.44
Lrif1Q8CDD9 Gm19368-201ENSMUST00000221258 4424 ntBASIC6.03□□□□□ -1.44
Lrif1Q8CDD9 Gp6-202ENSMUST00000206928 5900 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Lrif1Q8CDD9 D5Ertd577e-201ENSMUST00000094593 2462 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Lrif1Q8CDD9 Gm3453-201ENSMUST00000170686 1756 ntAPPRIS P5 TSL 5 BASIC6.03□□□□□ -1.44
Lrif1Q8CDD9 Ckap5-203ENSMUST00000111337 6384 ntTSL 5 BASIC6.03□□□□□ -1.44
Lrif1Q8CDD9 Prdm9-206ENSMUST00000167994 3460 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.44
Lrif1Q8CDD9 A2ml1-201ENSMUST00000060574 4695 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Lrif1Q8CDD9 Gm37725-201ENSMUST00000193965 2125 ntBASIC6.02□□□□□ -1.45
Lrif1Q8CDD9 Vmn1r89-207ENSMUST00000227390 1348 ntAPPRIS ALT2 BASIC6.02□□□□□ -1.45
Lrif1Q8CDD9 Gm38198-201ENSMUST00000191772 3581 ntBASIC6.02□□□□□ -1.45
Lrif1Q8CDD9 Gm30122-202ENSMUST00000218662 1556 ntTSL 5 BASIC6.02□□□□□ -1.45
Lrif1Q8CDD9 F830016B08Rik-201ENSMUST00000171297 3297 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Lrif1Q8CDD9 Sptlc3-202ENSMUST00000110083 2227 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Lrif1Q8CDD9 Olfr1385-202ENSMUST00000214948 4412 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Lrif1Q8CDD9 Gm5594-201ENSMUST00000172712 1429 ntBASIC6.02□□□□□ -1.45
Lrif1Q8CDD9 AC158595.1-201ENSMUST00000217989 1435 ntBASIC6.02□□□□□ -1.45
Lrif1Q8CDD9 Hnf4g-202ENSMUST00000108394 2327 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
Lrif1Q8CDD9 Olfr1062-203ENSMUST00000217481 3726 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Lrif1Q8CDD9 Gm37255-201ENSMUST00000193302 3060 ntBASIC6.02□□□□□ -1.45
Lrif1Q8CDD9 Gm38036-201ENSMUST00000194586 3564 ntBASIC6.02□□□□□ -1.45
Lrif1Q8CDD9 Gm25415-201ENSMUST00000104220 132 ntBASIC6.02□□□□□ -1.45
Lrif1Q8CDD9 Gm12439-201ENSMUST00000117162 365 ntBASIC6.02□□□□□ -1.45
Lrif1Q8CDD9 4930503H13Rik-201ENSMUST00000118320 725 ntBASIC6.02□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 82.7 ms