Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm20915-201ENSMUST00000191575 663 ntBASIC8.59□□□□□ -1.03
Usp40Q8BWR4 Gm18382-201ENSMUST00000194394 582 ntBASIC8.59□□□□□ -1.03
Usp40Q8BWR4 Gm43561-201ENSMUST00000199866 448 ntBASIC8.59□□□□□ -1.03
Usp40Q8BWR4 Gm45356-201ENSMUST00000209274 823 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Usp40Q8BWR4 Olfr27-201ENSMUST00000214052 1076 ntAPPRIS P1 TSL 3 BASIC8.59□□□□□ -1.03
Usp40Q8BWR4 AC165245.1-201ENSMUST00000214181 636 ntTSL 3 BASIC8.59□□□□□ -1.03
Usp40Q8BWR4 Gm39336-201ENSMUST00000214933 260 ntTSL 3 BASIC8.59□□□□□ -1.03
Usp40Q8BWR4 Gm18242-201ENSMUST00000218455 542 ntBASIC8.59□□□□□ -1.03
Usp40Q8BWR4 AC153936.1-201ENSMUST00000219874 395 ntBASIC8.59□□□□□ -1.03
Usp40Q8BWR4 Gm9237-201ENSMUST00000221499 548 ntBASIC8.59□□□□□ -1.03
Usp40Q8BWR4 Olfr250-201ENSMUST00000052085 996 ntAPPRIS P2 BASIC8.59□□□□□ -1.03
Usp40Q8BWR4 Olfr486-201ENSMUST00000072035 945 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
Usp40Q8BWR4 Olfr487-201ENSMUST00000081996 945 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
Usp40Q8BWR4 Fam205a4-201ENSMUST00000108026 4130 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Usp40Q8BWR4 AC159006.2-201ENSMUST00000228734 4144 ntBASIC8.59□□□□□ -1.03
Usp40Q8BWR4 Casp4-201ENSMUST00000027012 1435 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Usp40Q8BWR4 Zkscan1-202ENSMUST00000066617 8042 ntTSL 5 BASIC8.59□□□□□ -1.03
Usp40Q8BWR4 Dclre1c-201ENSMUST00000061852 7075 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Usp40Q8BWR4 Stk4-202ENSMUST00000088291 4098 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Usp40Q8BWR4 2900064K03Rik-201ENSMUST00000196567 3113 ntBASIC8.59□□□□□ -1.03
Usp40Q8BWR4 Brox-202ENSMUST00000163528 3413 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Usp40Q8BWR4 Wdr7-201ENSMUST00000072726 7109 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Usp40Q8BWR4 Gm6614-203ENSMUST00000181791 2450 ntAPPRIS P2 TSL 5 BASIC8.59□□□□□ -1.03
Usp40Q8BWR4 Sox6-210ENSMUST00000206034 8668 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
Usp40Q8BWR4 Gm26606-201ENSMUST00000181292 2439 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Usp40Q8BWR4 Vmn1r184-205ENSMUST00000227790 4334 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Usp40Q8BWR4 Fbxo16-204ENSMUST00000226005 3700 ntAPPRIS ALT2 BASIC8.58□□□□□ -1.04
Usp40Q8BWR4 Gm3424-201ENSMUST00000164585 1758 ntAPPRIS P5 TSL 5 BASIC8.58□□□□□ -1.04
Usp40Q8BWR4 Cdc42bpa-202ENSMUST00000097450 5160 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Usp40Q8BWR4 Gm10062-201ENSMUST00000072180 1470 ntBASIC8.58□□□□□ -1.04
Usp40Q8BWR4 Zfp942-201ENSMUST00000074295 1461 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Usp40Q8BWR4 Csn2-206ENSMUST00000197422 1329 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
Usp40Q8BWR4 Gm44441-201ENSMUST00000203642 2475 ntBASIC8.58□□□□□ -1.04
Usp40Q8BWR4 Cpsf6-201ENSMUST00000069168 6526 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Usp40Q8BWR4 Serpinb8-201ENSMUST00000000514 3001 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Usp40Q8BWR4 Vmn2r-ps133-201ENSMUST00000176979 2569 ntBASIC8.58□□□□□ -1.04
Usp40Q8BWR4 Atp2b4-207ENSMUST00000165602 8101 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
Usp40Q8BWR4 AC125328.1-201ENSMUST00000226812 2265 ntBASIC8.58□□□□□ -1.04
Usp40Q8BWR4 Gm28874-201ENSMUST00000190917 3134 ntBASIC8.58□□□□□ -1.04
Usp40Q8BWR4 Gm20486-201ENSMUST00000101544 128 ntBASIC8.58□□□□□ -1.04
Usp40Q8BWR4 Prl2c1-202ENSMUST00000110335 852 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
Usp40Q8BWR4 Gm4853-201ENSMUST00000119359 394 ntBASIC8.58□□□□□ -1.04
Usp40Q8BWR4 Mup-ps16-201ENSMUST00000120085 596 ntBASIC8.58□□□□□ -1.04
Usp40Q8BWR4 Gm12327-201ENSMUST00000121729 1168 ntBASIC8.58□□□□□ -1.04
Usp40Q8BWR4 Gm15787-206ENSMUST00000141008 585 ntTSL 2 BASIC8.58□□□□□ -1.04
Usp40Q8BWR4 1700026D11Rik-203ENSMUST00000144501 535 ntTSL 3 BASIC8.58□□□□□ -1.04
Usp40Q8BWR4 Gm23030-201ENSMUST00000158004 273 ntBASIC8.58□□□□□ -1.04
Usp40Q8BWR4 Gm23050-201ENSMUST00000158775 165 ntBASIC8.58□□□□□ -1.04
Usp40Q8BWR4 Gm13040-202ENSMUST00000169056 2104 ntAPPRIS P2 TSL 5 BASIC8.58□□□□□ -1.04
Usp40Q8BWR4 Esp16-201ENSMUST00000178037 1243 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Usp40Q8BWR4 Gm26057-201ENSMUST00000178099 165 ntBASIC8.58□□□□□ -1.04
Usp40Q8BWR4 Gm2058-201ENSMUST00000178791 560 ntBASIC8.58□□□□□ -1.04
Usp40Q8BWR4 Gm20917-201ENSMUST00000179922 990 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Usp40Q8BWR4 Igkv19-93-201ENSMUST00000183936 344 ntAPPRIS ALT2 BASIC8.58□□□□□ -1.04
Usp40Q8BWR4 Gm6140-201ENSMUST00000192494 966 ntBASIC8.58□□□□□ -1.04
Usp40Q8BWR4 Gm17934-201ENSMUST00000192818 422 ntBASIC8.58□□□□□ -1.04
Usp40Q8BWR4 Gm2453-201ENSMUST00000193383 357 ntTSL 5 BASIC8.58□□□□□ -1.04
Usp40Q8BWR4 Gm19885-201ENSMUST00000212853 343 ntBASIC8.58□□□□□ -1.04
Usp40Q8BWR4 AC156037.1-201ENSMUST00000221133 127 ntBASIC8.58□□□□□ -1.04
Usp40Q8BWR4 AC125543.3-201ENSMUST00000221991 126 ntBASIC8.58□□□□□ -1.04
Usp40Q8BWR4 AC159293.2-201ENSMUST00000222289 424 ntBASIC8.58□□□□□ -1.04
Usp40Q8BWR4 Smim15-202ENSMUST00000223808 808 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Usp40Q8BWR4 Olfr410-201ENSMUST00000052254 948 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Usp40Q8BWR4 Gm21994-201ENSMUST00000063463 990 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Usp40Q8BWR4 Gm23238-201ENSMUST00000083007 164 ntBASIC8.58□□□□□ -1.04
Usp40Q8BWR4 Prom1-205ENSMUST00000165909 4089 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Usp40Q8BWR4 Gm37347-201ENSMUST00000193969 3071 ntBASIC8.58□□□□□ -1.04
Usp40Q8BWR4 AC154806.2-201ENSMUST00000227212 2385 ntBASIC8.58□□□□□ -1.04
Usp40Q8BWR4 Akap2-201ENSMUST00000043456 7211 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Usp40Q8BWR4 Ddx58-201ENSMUST00000037907 3874 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Usp40Q8BWR4 Olfr686-203ENSMUST00000216143 2612 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Usp40Q8BWR4 Golgb1-203ENSMUST00000114812 11012 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
Usp40Q8BWR4 Slco6b1-202ENSMUST00000178359 1778 ntBASIC8.58□□□□□ -1.04
Usp40Q8BWR4 Gm18313-201ENSMUST00000221036 1784 ntBASIC8.58□□□□□ -1.04
Usp40Q8BWR4 Ttf1-201ENSMUST00000100237 4160 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Usp40Q8BWR4 Lhx9-203ENSMUST00000093486 4551 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Usp40Q8BWR4 AC129085.2-201ENSMUST00000223763 2800 ntBASIC8.58□□□□□ -1.04
Usp40Q8BWR4 Olfr957-202ENSMUST00000216177 1726 ntAPPRIS P1 TSL 3 BASIC8.57□□□□□ -1.04
Usp40Q8BWR4 Lilrb4a-201ENSMUST00000217706 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Usp40Q8BWR4 Gbp3-203ENSMUST00000106222 2629 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Usp40Q8BWR4 Cntn5-202ENSMUST00000160216 4192 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Usp40Q8BWR4 Gm21655-202ENSMUST00000199295 2975 ntTSL 5 BASIC8.57□□□□□ -1.04
Usp40Q8BWR4 Gm21680-201ENSMUST00000200447 2975 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Usp40Q8BWR4 Ift80-201ENSMUST00000029347 3880 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Usp40Q8BWR4 Ccp110-201ENSMUST00000038650 4716 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Usp40Q8BWR4 Ear1-201ENSMUST00000100691 713 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Usp40Q8BWR4 Mup19-202ENSMUST00000107477 720 ntAPPRIS ALT2 TSL 2 BASIC8.57□□□□□ -1.04
Usp40Q8BWR4 Gm3033-201ENSMUST00000112792 438 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Usp40Q8BWR4 Gm15194-201ENSMUST00000120453 434 ntBASIC8.57□□□□□ -1.04
Usp40Q8BWR4 Gm11787-201ENSMUST00000121996 1050 ntBASIC8.57□□□□□ -1.04
Usp40Q8BWR4 1700057H15Rik-201ENSMUST00000127913 595 ntTSL 3 BASIC8.57□□□□□ -1.04
Usp40Q8BWR4 4930423M02Rik-202ENSMUST00000156903 1205 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Usp40Q8BWR4 Gm23539-201ENSMUST00000157537 224 ntBASIC8.57□□□□□ -1.04
Usp40Q8BWR4 Gm8159-201ENSMUST00000163738 997 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
Usp40Q8BWR4 Gm8297-201ENSMUST00000171636 997 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
Usp40Q8BWR4 Gm3715-201ENSMUST00000172308 617 ntBASIC8.57□□□□□ -1.04
Usp40Q8BWR4 V1rd19-201ENSMUST00000173571 1157 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Usp40Q8BWR4 4932441J04Rik-201ENSMUST00000180708 729 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Usp40Q8BWR4 Gm26653-201ENSMUST00000181537 1214 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Usp40Q8BWR4 1810022K09Rik-204ENSMUST00000186870 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms