Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Gm22365-201ENSMUST00000093750 117 ntBASIC6.04□□□□□ -1.44
Foxc1Q61572 4930511E03Rik-201ENSMUST00000203778 2232 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Foxc1Q61572 Klrb1b-201ENSMUST00000032472 2228 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Foxc1Q61572 Ift122-203ENSMUST00000112925 4122 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Foxc1Q61572 AI314278-202ENSMUST00000209026 2373 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Foxc1Q61572 Usp37-201ENSMUST00000044260 7111 ntTSL 5 BASIC6.04□□□□□ -1.44
Foxc1Q61572 AC158986.1-201ENSMUST00000228391 3455 ntBASIC6.04□□□□□ -1.44
Foxc1Q61572 Dnaic1-201ENSMUST00000102963 2510 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Foxc1Q61572 Gm11217-201ENSMUST00000141162 1729 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Foxc1Q61572 Tnfrsf19-201ENSMUST00000111234 4051 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Foxc1Q61572 Frem1-202ENSMUST00000107230 9690 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
Foxc1Q61572 Eri2-207ENSMUST00000150844 3564 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Foxc1Q61572 Dalir-201ENSMUST00000188773 2170 ntBASIC6.04□□□□□ -1.44
Foxc1Q61572 Gm45149-201ENSMUST00000206459 2172 ntBASIC6.04□□□□□ -1.44
Foxc1Q61572 Atp8a1-207ENSMUST00000135930 8069 ntAPPRIS ALT1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Foxc1Q61572 Gprasp2-201ENSMUST00000113136 3736 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Foxc1Q61572 Ubtfl1-202ENSMUST00000164441 2639 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Foxc1Q61572 Pax5-201ENSMUST00000014174 8004 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Foxc1Q61572 Cyp4a29-201ENSMUST00000118278 1530 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Foxc1Q61572 Gm6634-201ENSMUST00000180497 1804 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Foxc1Q61572 Phc3-202ENSMUST00000064718 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Foxc1Q61572 Ranbp3l-201ENSMUST00000053308 3017 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Foxc1Q61572 Stab2-201ENSMUST00000035288 8228 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Foxc1Q61572 Gsk3b-202ENSMUST00000114750 1750 ntAPPRIS ALT1 TSL 5 BASIC6.03□□□□□ -1.44
Foxc1Q61572 Gm37703-201ENSMUST00000192292 1784 ntBASIC6.03□□□□□ -1.44
Foxc1Q61572 Gm18639-201ENSMUST00000210442 1769 ntBASIC6.03□□□□□ -1.44
Foxc1Q61572 Adcy10-202ENSMUST00000111439 5193 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
Foxc1Q61572 Olfr1037-202ENSMUST00000213333 1610 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Foxc1Q61572 Zfp955a-201ENSMUST00000008830 1638 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Foxc1Q61572 Gm28338-202ENSMUST00000186269 1499 ntTSL 5 BASIC6.03□□□□□ -1.44
Foxc1Q61572 Gm28668-202ENSMUST00000186549 1499 ntTSL 5 BASIC6.03□□□□□ -1.44
Foxc1Q61572 Gm28735-202ENSMUST00000188159 1499 ntTSL 5 BASIC6.03□□□□□ -1.44
Foxc1Q61572 Gm29457-201ENSMUST00000188224 1499 ntTSL 5 BASIC6.03□□□□□ -1.44
Foxc1Q61572 Obox2-201ENSMUST00000036575 1459 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Foxc1Q61572 4930546K05Rik-202ENSMUST00000216586 3539 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Foxc1Q61572 Kif24-202ENSMUST00000108055 5593 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Foxc1Q61572 Dock2-201ENSMUST00000093193 6409 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Foxc1Q61572 Apobec3-202ENSMUST00000109620 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Foxc1Q61572 Eif2b3-202ENSMUST00000106447 3754 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Foxc1Q61572 E130018O15Rik-201ENSMUST00000069741 3776 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Foxc1Q61572 Selenop-201ENSMUST00000082424 2013 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Foxc1Q61572 Gm43942-201ENSMUST00000204522 2859 ntBASIC6.03□□□□□ -1.44
Foxc1Q61572 Gm38110-201ENSMUST00000194594 1551 ntBASIC6.03□□□□□ -1.44
Foxc1Q61572 Nr5a2-201ENSMUST00000027649 4733 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Foxc1Q61572 Adgrb3-205ENSMUST00000135518 5432 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Foxc1Q61572 Gm5120-201ENSMUST00000215231 2414 ntBASIC6.03□□□□□ -1.44
Foxc1Q61572 Zfp40-201ENSMUST00000037057 4103 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Foxc1Q61572 Igkv12-89-201ENSMUST00000103335 335 ntAPPRIS ALT2 BASIC6.03□□□□□ -1.44
Foxc1Q61572 Sirpb1c-205ENSMUST00000108354 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Foxc1Q61572 Gm14561-201ENSMUST00000117376 798 ntBASIC6.03□□□□□ -1.44
Foxc1Q61572 Gm11207-201ENSMUST00000117824 414 ntBASIC6.03□□□□□ -1.44
Foxc1Q61572 Gm13835-201ENSMUST00000118459 685 ntBASIC6.03□□□□□ -1.44
Foxc1Q61572 Gm13013-201ENSMUST00000119087 523 ntBASIC6.03□□□□□ -1.44
Foxc1Q61572 Gm11262-201ENSMUST00000119326 833 ntBASIC6.03□□□□□ -1.44
Foxc1Q61572 Hspe1-ps4-201ENSMUST00000119538 286 ntBASIC6.03□□□□□ -1.44
Foxc1Q61572 Gm14830-201ENSMUST00000121899 700 ntBASIC6.03□□□□□ -1.44
Foxc1Q61572 Defa-ps12-201ENSMUST00000122353 193 ntBASIC6.03□□□□□ -1.44
Foxc1Q61572 Crem-206ENSMUST00000124747 973 ntTSL 2 BASIC6.03□□□□□ -1.44
Foxc1Q61572 6030471H07Rik-201ENSMUST00000125884 492 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Foxc1Q61572 Gm13029-201ENSMUST00000137283 594 ntTSL 3 BASIC6.03□□□□□ -1.44
Foxc1Q61572 Mup-ps2-201ENSMUST00000142602 533 ntBASIC6.03□□□□□ -1.44
Foxc1Q61572 Gm6706-201ENSMUST00000145087 318 ntBASIC6.03□□□□□ -1.44
Foxc1Q61572 Gm11423-202ENSMUST00000152784 686 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Foxc1Q61572 Gm16321-201ENSMUST00000155184 574 ntTSL 3 BASIC6.03□□□□□ -1.44
Foxc1Q61572 Gm22261-201ENSMUST00000158691 324 ntBASIC6.03□□□□□ -1.44
Foxc1Q61572 Gm24875-201ENSMUST00000158888 104 ntBASIC6.03□□□□□ -1.44
Foxc1Q61572 Gm25837-201ENSMUST00000158919 108 ntBASIC6.03□□□□□ -1.44
Foxc1Q61572 Ear-ps7-201ENSMUST00000161287 442 ntBASIC6.03□□□□□ -1.44
Foxc1Q61572 Tmem258-204ENSMUST00000166412 447 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Foxc1Q61572 Gm15446-203ENSMUST00000170826 192 ntTSL 5 BASIC6.03□□□□□ -1.44
Foxc1Q61572 1700010K23Rik-201ENSMUST00000174502 376 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Foxc1Q61572 Gm24561-201ENSMUST00000175182 95 ntBASIC6.03□□□□□ -1.44
Foxc1Q61572 Gm20673-201ENSMUST00000177167 430 ntBASIC6.03□□□□□ -1.44
Foxc1Q61572 Gm21560-202ENSMUST00000177670 618 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
Foxc1Q61572 Gm25451-201ENSMUST00000177832 121 ntBASIC6.03□□□□□ -1.44
Foxc1Q61572 Calm5-201ENSMUST00000183198 589 ntBASIC6.03□□□□□ -1.44
Foxc1Q61572 Gm27187-202ENSMUST00000184873 606 ntTSL 3 BASIC6.03□□□□□ -1.44
Foxc1Q61572 Ms4a3-202ENSMUST00000186023 966 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Foxc1Q61572 1700019P21Rik-201ENSMUST00000186955 411 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Foxc1Q61572 1700064J06Rik-201ENSMUST00000187551 386 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Foxc1Q61572 Gm37841-201ENSMUST00000195367 376 ntBASIC6.03□□□□□ -1.44
Foxc1Q61572 Gm43711-201ENSMUST00000195994 373 ntBASIC6.03□□□□□ -1.44
Foxc1Q61572 Gm20940-201ENSMUST00000197308 360 ntBASIC6.03□□□□□ -1.44
Foxc1Q61572 Gm19252-201ENSMUST00000204705 305 ntBASIC6.03□□□□□ -1.44
Foxc1Q61572 Gm36816-201ENSMUST00000204824 493 ntTSL 3 BASIC6.03□□□□□ -1.44
Foxc1Q61572 Gm44613-202ENSMUST00000205962 691 ntTSL 3 BASIC6.03□□□□□ -1.44
Foxc1Q61572 Gm44979-201ENSMUST00000206218 287 ntBASIC6.03□□□□□ -1.44
Foxc1Q61572 Gm45756-201ENSMUST00000212491 407 ntBASIC6.03□□□□□ -1.44
Foxc1Q61572 Gm40685-201ENSMUST00000217861 580 ntTSL 3 BASIC6.03□□□□□ -1.44
Foxc1Q61572 Gm46234-201ENSMUST00000218702 259 ntBASIC6.03□□□□□ -1.44
Foxc1Q61572 C230072F16Rik-201ENSMUST00000219184 1253 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Foxc1Q61572 Gm10451-202ENSMUST00000219367 855 ntTSL 2 BASIC6.03□□□□□ -1.44
Foxc1Q61572 Gm34278-201ENSMUST00000220534 622 ntTSL 5 BASIC6.03□□□□□ -1.44
Foxc1Q61572 AC124732.4-201ENSMUST00000220930 1274 ntBASIC6.03□□□□□ -1.44
Foxc1Q61572 Gm30198-201ENSMUST00000222873 824 ntTSL 2 BASIC6.03□□□□□ -1.44
Foxc1Q61572 AC154806.1-202ENSMUST00000227949 885 ntBASIC6.03□□□□□ -1.44
Foxc1Q61572 AC121978.1-201ENSMUST00000228357 380 ntBASIC6.03□□□□□ -1.44
Foxc1Q61572 Gsta2-201ENSMUST00000034902 870 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Foxc1Q61572 Hist1h1t-201ENSMUST00000041052 912 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Foxc1Q61572 Spag11a-201ENSMUST00000058955 436 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 74 ms