Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Gm10220-201ENSMUST00000088236 2980 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
Vps54Q5SPW0 Gm38026-201ENSMUST00000193284 3880 ntBASIC7.27□□□□□ -1.24
Vps54Q5SPW0 Gm12057-201ENSMUST00000117244 1427 ntBASIC7.27□□□□□ -1.24
Vps54Q5SPW0 Cdh7-203ENSMUST00000129923 1409 ntTSL 1 (best) BASIC7.27□□□□□ -1.24
Vps54Q5SPW0 Rnf219-201ENSMUST00000022716 3420 ntAPPRIS P2 TSL 3 BASIC7.27□□□□□ -1.24
Vps54Q5SPW0 A530076I17Rik-202ENSMUST00000228352 1524 ntBASIC7.27□□□□□ -1.25
Vps54Q5SPW0 Dcx-201ENSMUST00000033642 9074 ntAPPRIS ALT1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Vps54Q5SPW0 AC159244.3-201ENSMUST00000222887 3153 ntBASIC7.27□□□□□ -1.25
Vps54Q5SPW0 Fut9-201ENSMUST00000084770 12134 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Vps54Q5SPW0 St18-208ENSMUST00000140079 5892 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Vps54Q5SPW0 Vmn1r15-201ENSMUST00000228297 2021 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
Vps54Q5SPW0 Gm37926-201ENSMUST00000191922 2424 ntBASIC7.27□□□□□ -1.25
Vps54Q5SPW0 Fastkd1-202ENSMUST00000102706 2511 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.25
Vps54Q5SPW0 1700071M16Rik-203ENSMUST00000169733 2504 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Vps54Q5SPW0 Zfp2-202ENSMUST00000109129 2803 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Vps54Q5SPW0 Olfr537-ps1-202ENSMUST00000210949 2821 ntAPPRIS P1 TSL 3 BASIC7.27□□□□□ -1.25
Vps54Q5SPW0 Gm24048-201ENSMUST00000102411 106 ntBASIC7.27□□□□□ -1.25
Vps54Q5SPW0 Gm22372-201ENSMUST00000104589 136 ntBASIC7.27□□□□□ -1.25
Vps54Q5SPW0 Skint8-201ENSMUST00000106572 1290 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.25
Vps54Q5SPW0 Gm12790-201ENSMUST00000106916 951 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
Vps54Q5SPW0 Dynlt1-ps1-201ENSMUST00000117045 342 ntBASIC7.27□□□□□ -1.25
Vps54Q5SPW0 Gm11987-201ENSMUST00000118524 381 ntBASIC7.27□□□□□ -1.25
Vps54Q5SPW0 Gm14783-201ENSMUST00000118900 663 ntBASIC7.27□□□□□ -1.25
Vps54Q5SPW0 Gm14842-201ENSMUST00000119577 269 ntBASIC7.27□□□□□ -1.25
Vps54Q5SPW0 Pttg1-206ENSMUST00000121638 948 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Vps54Q5SPW0 Olfr408-ps1-201ENSMUST00000121710 941 ntBASIC7.27□□□□□ -1.25
Vps54Q5SPW0 Snora47-201ENSMUST00000157483 138 ntBASIC7.27□□□□□ -1.25
Vps54Q5SPW0 Gm26167-201ENSMUST00000158423 253 ntBASIC7.27□□□□□ -1.25
Vps54Q5SPW0 Gm16557-201ENSMUST00000159182 191 ntBASIC7.27□□□□□ -1.25
Vps54Q5SPW0 Gm5692-201ENSMUST00000187254 1057 ntBASIC7.27□□□□□ -1.25
Vps54Q5SPW0 1700104B16Rik-202ENSMUST00000187948 722 ntTSL 2 BASIC7.27□□□□□ -1.25
Vps54Q5SPW0 Gm37223-206ENSMUST00000195070 699 ntTSL 3 BASIC7.27□□□□□ -1.25
Vps54Q5SPW0 Gm43470-201ENSMUST00000196175 454 ntTSL 5 BASIC7.27□□□□□ -1.25
Vps54Q5SPW0 Gm45485-201ENSMUST00000211229 357 ntBASIC7.27□□□□□ -1.25
Vps54Q5SPW0 AC118476.1-201ENSMUST00000216237 349 ntTSL 3 BASIC7.27□□□□□ -1.25
Vps54Q5SPW0 AC121788.1-201ENSMUST00000218514 1046 ntTSL 5 BASIC7.27□□□□□ -1.25
Vps54Q5SPW0 4930543I11Rik-201ENSMUST00000219006 959 ntBASIC7.27□□□□□ -1.25
Vps54Q5SPW0 A330049N07Rik-202ENSMUST00000219920 587 ntTSL 5 BASIC7.27□□□□□ -1.25
Vps54Q5SPW0 AC159208.1-201ENSMUST00000221403 649 ntBASIC7.27□□□□□ -1.25
Vps54Q5SPW0 Otogl-201ENSMUST00000165341 8763 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
Vps54Q5SPW0 Vmn1r31-203ENSMUST00000177318 2076 ntAPPRIS P2 TSL 2 BASIC7.27□□□□□ -1.25
Vps54Q5SPW0 Gabpb2-204ENSMUST00000107209 8357 ntAPPRIS P2 TSL 1 (best) BASIC7.27□□□□□ -1.25
Vps54Q5SPW0 Ncl-201ENSMUST00000027438 8202 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Vps54Q5SPW0 Pkd1l3-202ENSMUST00000109242 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
Vps54Q5SPW0 Nr3c1-204ENSMUST00000115571 6327 ntAPPRIS P2 TSL 1 (best) BASIC7.27□□□□□ -1.25
Vps54Q5SPW0 4932435O22Rik-202ENSMUST00000148405 3406 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Vps54Q5SPW0 Ankrd55-205ENSMUST00000223871 3209 ntBASIC7.27□□□□□ -1.25
Vps54Q5SPW0 Sytl5-202ENSMUST00000086165 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
Vps54Q5SPW0 Gm43982-201ENSMUST00000204995 1829 ntBASIC7.27□□□□□ -1.25
Vps54Q5SPW0 A330076H08Rik-202ENSMUST00000207694 1836 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Vps54Q5SPW0 Cfap61-206ENSMUST00000133433 3998 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
Vps54Q5SPW0 Adgrg6-203ENSMUST00000208429 3582 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
Vps54Q5SPW0 AC155298.1-201ENSMUST00000225350 3250 ntBASIC7.26□□□□□ -1.25
Vps54Q5SPW0 Sugt1-201ENSMUST00000054908 7392 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Vps54Q5SPW0 Fam60a-211ENSMUST00000204435 2785 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
Vps54Q5SPW0 Hdac9-201ENSMUST00000110819 4413 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Vps54Q5SPW0 Slamf6-201ENSMUST00000171330 2485 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
Vps54Q5SPW0 Tcf7-201ENSMUST00000086844 2471 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Vps54Q5SPW0 Zfp462-203ENSMUST00000098070 10465 ntAPPRIS P2 TSL 5 BASIC7.26□□□□□ -1.25
Vps54Q5SPW0 Gm6558-201ENSMUST00000191934 1973 ntBASIC7.26□□□□□ -1.25
Vps54Q5SPW0 Gm45516-201ENSMUST00000211588 4182 ntBASIC7.26□□□□□ -1.25
Vps54Q5SPW0 Gm13101-201ENSMUST00000105763 1678 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Vps54Q5SPW0 Dock2-203ENSMUST00000101365 3785 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Vps54Q5SPW0 Vmn1r51-209ENSMUST00000227911 4021 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Vps54Q5SPW0 Gm20877-201ENSMUST00000100105 1212 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
Vps54Q5SPW0 Klrd1-202ENSMUST00000112063 895 ntAPPRIS P2 TSL 1 (best) BASIC7.26□□□□□ -1.25
Vps54Q5SPW0 Gm12244-201ENSMUST00000119500 291 ntBASIC7.26□□□□□ -1.25
Vps54Q5SPW0 Scgb1b20-201ENSMUST00000166714 421 ntAPPRIS P1 TSL 2 BASIC7.26□□□□□ -1.25
Vps54Q5SPW0 1700091H14Rik-201ENSMUST00000167772 590 ntBASIC7.26□□□□□ -1.25
Vps54Q5SPW0 Pkib-211ENSMUST00000177473 525 ntAPPRIS P1 TSL 3 BASIC7.26□□□□□ -1.25
Vps54Q5SPW0 Gm20917-201ENSMUST00000179922 990 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Vps54Q5SPW0 Gm3650-201ENSMUST00000180600 747 ntBASIC7.26□□□□□ -1.25
Vps54Q5SPW0 Gm28358-201ENSMUST00000187860 636 ntTSL 5 BASIC7.26□□□□□ -1.25
Vps54Q5SPW0 Gm18407-201ENSMUST00000192126 790 ntBASIC7.26□□□□□ -1.25
Vps54Q5SPW0 AC157822.1-201ENSMUST00000196643 80 ntBASIC7.26□□□□□ -1.25
Vps54Q5SPW0 Gm44442-201ENSMUST00000204298 422 ntTSL 3 BASIC7.26□□□□□ -1.25
Vps54Q5SPW0 Gm44940-201ENSMUST00000206225 1247 ntBASIC7.26□□□□□ -1.25
Vps54Q5SPW0 Gm45850-201ENSMUST00000212536 338 ntBASIC7.26□□□□□ -1.25
Vps54Q5SPW0 Gm32172-201ENSMUST00000220029 633 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Vps54Q5SPW0 AC113198.1-201ENSMUST00000226353 832 ntBASIC7.26□□□□□ -1.25
Vps54Q5SPW0 Klrd1-201ENSMUST00000032268 586 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
Vps54Q5SPW0 Gm5229-201ENSMUST00000039375 354 ntBASIC7.26□□□□□ -1.25
Vps54Q5SPW0 Skint10-202ENSMUST00000068851 493 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Vps54Q5SPW0 Olfr516-201ENSMUST00000071410 945 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Vps54Q5SPW0 Celf2-204ENSMUST00000114924 8738 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Vps54Q5SPW0 Gm37914-201ENSMUST00000195317 2679 ntBASIC7.26□□□□□ -1.25
Vps54Q5SPW0 Cylc2-201ENSMUST00000041392 1641 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
Vps54Q5SPW0 Gbp9-201ENSMUST00000031238 4381 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Vps54Q5SPW0 Mgam2-ps-201ENSMUST00000195870 3745 ntBASIC7.26□□□□□ -1.25
Vps54Q5SPW0 Bmpr1b-204ENSMUST00000106232 4164 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Vps54Q5SPW0 Gm44750-201ENSMUST00000206185 2223 ntBASIC7.25□□□□□ -1.25
Vps54Q5SPW0 Gm37925-201ENSMUST00000195352 4255 ntBASIC7.25□□□□□ -1.25
Vps54Q5SPW0 Gm37238-201ENSMUST00000195552 2390 ntBASIC7.25□□□□□ -1.25
Vps54Q5SPW0 5530400K19Rik-201ENSMUST00000193511 1916 ntBASIC7.25□□□□□ -1.25
Vps54Q5SPW0 CT010577.1-202ENSMUST00000226187 1903 ntBASIC7.25□□□□□ -1.25
Vps54Q5SPW0 Olfr453-202ENSMUST00000213997 3082 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
Vps54Q5SPW0 Gm5930-201ENSMUST00000111863 1746 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
Vps54Q5SPW0 Il1rl2-204ENSMUST00000194296 3908 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Vps54Q5SPW0 Gm43874-201ENSMUST00000204853 2798 ntBASIC7.25□□□□□ -1.25
Vps54Q5SPW0 Gm25564-201ENSMUST00000104604 132 ntBASIC7.25□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms