Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 AC170810.1-201ENSMUST00000228267 672 ntBASIC12.7□□□□□ -0.38
Trim41Q5NCC3 AC154532.2-201ENSMUST00000228947 598 ntBASIC12.7□□□□□ -0.38
Trim41Q5NCC3 Olfr137-201ENSMUST00000057394 942 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Trim41Q5NCC3 Olfr850-201ENSMUST00000077347 948 ntAPPRIS P2 BASIC12.7□□□□□ -0.38
Trim41Q5NCC3 Cbx3-ps7-201ENSMUST00000081455 552 ntBASIC12.7□□□□□ -0.38
Trim41Q5NCC3 Gm26111-201ENSMUST00000083969 106 ntBASIC12.7□□□□□ -0.38
Trim41Q5NCC3 Gm15127-201ENSMUST00000101186 2026 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Trim41Q5NCC3 Gm15091-201ENSMUST00000112740 2026 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trim41Q5NCC3 Gm15109-201ENSMUST00000133085 2026 ntBASIC12.7□□□□□ -0.38
Trim41Q5NCC3 Myo1h-205ENSMUST00000169347 3545 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Trim41Q5NCC3 Mak-201ENSMUST00000021792 3385 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim41Q5NCC3 Ikbkg-207ENSMUST00000114133 6994 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim41Q5NCC3 Trub1-201ENSMUST00000026072 4300 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim41Q5NCC3 Ampd3-208ENSMUST00000213373 3337 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Trim41Q5NCC3 AC153881.3-201ENSMUST00000218494 1561 ntBASIC12.69□□□□□ -0.38
Trim41Q5NCC3 R3hdm2-204ENSMUST00000105250 3975 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Trim41Q5NCC3 Olfr1352-201ENSMUST00000058991 4356 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Trim41Q5NCC3 Gm45191-201ENSMUST00000205846 5439 ntBASIC12.69□□□□□ -0.38
Trim41Q5NCC3 Myo16-202ENSMUST00000207204 6719 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim41Q5NCC3 Nalcn-201ENSMUST00000000201 7122 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trim41Q5NCC3 Pknox2-202ENSMUST00000080754 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim41Q5NCC3 Gm9144-201ENSMUST00000101625 1008 ntBASIC12.69□□□□□ -0.38
Trim41Q5NCC3 Lrrc51-205ENSMUST00000106965 743 ntTSL 3 BASIC12.69□□□□□ -0.38
Trim41Q5NCC3 Gm13400-201ENSMUST00000117436 380 ntBASIC12.69□□□□□ -0.38
Trim41Q5NCC3 Gm16383-201ENSMUST00000118122 232 ntBASIC12.69□□□□□ -0.38
Trim41Q5NCC3 Gm14939-201ENSMUST00000120347 680 ntBASIC12.69□□□□□ -0.38
Trim41Q5NCC3 1700061H18Rik-201ENSMUST00000139488 634 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim41Q5NCC3 Gm13180-201ENSMUST00000141222 440 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim41Q5NCC3 Gm16139-201ENSMUST00000160015 420 ntBASIC12.69□□□□□ -0.38
Trim41Q5NCC3 Vmn1r1-201ENSMUST00000169123 921 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Trim41Q5NCC3 Obox4-ps9-201ENSMUST00000176927 1136 ntBASIC12.69□□□□□ -0.38
Trim41Q5NCC3 Nrg3os-201ENSMUST00000177141 927 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim41Q5NCC3 4933416M07Rik-201ENSMUST00000181424 624 ntTSL 5 BASIC12.69□□□□□ -0.38
Trim41Q5NCC3 Gm42437-201ENSMUST00000197263 923 ntBASIC12.69□□□□□ -0.38
Trim41Q5NCC3 Gm7285-201ENSMUST00000198801 580 ntBASIC12.69□□□□□ -0.38
Trim41Q5NCC3 Gm36548-202ENSMUST00000200222 494 ntTSL 5 BASIC12.69□□□□□ -0.38
Trim41Q5NCC3 Gm45307-201ENSMUST00000211122 751 ntTSL 3 BASIC12.69□□□□□ -0.38
Trim41Q5NCC3 CT009713.5-201ENSMUST00000224508 909 ntBASIC12.69□□□□□ -0.38
Trim41Q5NCC3 AC154576.2-203ENSMUST00000224736 253 ntBASIC12.69□□□□□ -0.38
Trim41Q5NCC3 Olfr1018-201ENSMUST00000054201 936 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Trim41Q5NCC3 Olfr836-201ENSMUST00000074986 955 ntAPPRIS P2 BASIC12.69□□□□□ -0.38
Trim41Q5NCC3 Gm25404-201ENSMUST00000082970 107 ntBASIC12.69□□□□□ -0.38
Trim41Q5NCC3 Mir27a-201ENSMUST00000083510 87 ntBASIC12.69□□□□□ -0.38
Trim41Q5NCC3 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim41Q5NCC3 Defb26-201ENSMUST00000099205 561 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim41Q5NCC3 Psg18-201ENSMUST00000003597 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim41Q5NCC3 Gm13081-201ENSMUST00000121527 5599 ntBASIC12.69□□□□□ -0.38
Trim41Q5NCC3 Gm15095-201ENSMUST00000118996 1430 ntBASIC12.69□□□□□ -0.38
Trim41Q5NCC3 Fam47c-201ENSMUST00000105110 1639 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Trim41Q5NCC3 CT025642.2-201ENSMUST00000225009 1649 ntBASIC12.69□□□□□ -0.38
Trim41Q5NCC3 Olfr523-205ENSMUST00000215785 4165 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Trim41Q5NCC3 Pinc-201ENSMUST00000190229 2170 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim41Q5NCC3 Pnisr-201ENSMUST00000029911 4545 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim41Q5NCC3 Ttc9c-202ENSMUST00000096751 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim41Q5NCC3 4930444A19Rik-201ENSMUST00000188243 2117 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trim41Q5NCC3 AC164978.1-201ENSMUST00000228608 4011 ntBASIC12.68□□□□□ -0.38
Trim41Q5NCC3 Gm26656-201ENSMUST00000181825 2972 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trim41Q5NCC3 Olfr1131-203ENSMUST00000216756 1459 ntTSL 3 BASIC12.68□□□□□ -0.38
Trim41Q5NCC3 Dsg4-201ENSMUST00000019426 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim41Q5NCC3 Gm25498-201ENSMUST00000104424 129 ntBASIC12.68□□□□□ -0.38
Trim41Q5NCC3 Cd209d-201ENSMUST00000011445 919 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim41Q5NCC3 Gm14891-201ENSMUST00000117378 596 ntBASIC12.68□□□□□ -0.38
Trim41Q5NCC3 Apc-ps1-201ENSMUST00000119356 470 ntBASIC12.68□□□□□ -0.38
Trim41Q5NCC3 Gm13367-201ENSMUST00000119955 796 ntBASIC12.68□□□□□ -0.38
Trim41Q5NCC3 Gm12045-201ENSMUST00000122122 573 ntBASIC12.68□□□□□ -0.38
Trim41Q5NCC3 Gm22452-201ENSMUST00000122804 104 ntBASIC12.68□□□□□ -0.38
Trim41Q5NCC3 Gm15344-201ENSMUST00000152600 421 ntTSL 3 BASIC12.68□□□□□ -0.38
Trim41Q5NCC3 Vmn1r91-201ENSMUST00000165330 924 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Trim41Q5NCC3 Gm17137-202ENSMUST00000165729 957 ntBASIC12.68□□□□□ -0.38
Trim41Q5NCC3 Gm6647-201ENSMUST00000170514 641 ntBASIC12.68□□□□□ -0.38
Trim41Q5NCC3 Gm17060-201ENSMUST00000172394 824 ntBASIC12.68□□□□□ -0.38
Trim41Q5NCC3 Gm29357-201ENSMUST00000186877 698 ntBASIC12.68□□□□□ -0.38
Trim41Q5NCC3 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trim41Q5NCC3 Olfr1134-203ENSMUST00000213939 1015 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Trim41Q5NCC3 AC154795.1-201ENSMUST00000225611 364 ntBASIC12.68□□□□□ -0.38
Trim41Q5NCC3 Efcab9-201ENSMUST00000054327 754 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim41Q5NCC3 Gm23242-201ENSMUST00000083055 107 ntBASIC12.68□□□□□ -0.38
Trim41Q5NCC3 Olfr1156-201ENSMUST00000099842 1076 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Trim41Q5NCC3 Exd1-203ENSMUST00000171024 5290 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim41Q5NCC3 Olfr1294-202ENSMUST00000208675 1983 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Trim41Q5NCC3 Trappc13-201ENSMUST00000022224 2342 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim41Q5NCC3 Zfp60-202ENSMUST00000108336 5896 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim41Q5NCC3 Zfp239-201ENSMUST00000079405 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim41Q5NCC3 Gprasp1-202ENSMUST00000113145 5640 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim41Q5NCC3 Gprasp1-203ENSMUST00000113147 5611 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim41Q5NCC3 Gm37283-201ENSMUST00000193111 1571 ntBASIC12.68□□□□□ -0.38
Trim41Q5NCC3 2610203C22Rik-204ENSMUST00000148585 3475 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trim41Q5NCC3 Mast4-212ENSMUST00000171791 7647 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Trim41Q5NCC3 3632451O06Rik-201ENSMUST00000036972 8831 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim41Q5NCC3 Pak7-202ENSMUST00000077200 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim41Q5NCC3 4921525O09Rik-201ENSMUST00000220691 3270 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trim41Q5NCC3 Gm43422-201ENSMUST00000199780 3571 ntBASIC12.68□□□□□ -0.38
Trim41Q5NCC3 C030034L19Rik-201ENSMUST00000180874 2032 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim41Q5NCC3 Gm29226-201ENSMUST00000186871 2167 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim41Q5NCC3 Dpy19l3-201ENSMUST00000051377 8006 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim41Q5NCC3 Zmym5-202ENSMUST00000111285 5351 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trim41Q5NCC3 Gm15759-201ENSMUST00000161126 3723 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim41Q5NCC3 Gm10475-201ENSMUST00000084713 1796 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim41Q5NCC3 Gm26417-201ENSMUST00000104274 135 ntBASIC12.67□□□□□ -0.38
Trim41Q5NCC3 Gm16276-201ENSMUST00000131218 262 ntBASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 71.4 ms