Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Gm10205-201ENSMUST00000087431 234 ntBASIC6.09□□□□□ -1.43
Trafd1Q3UDK1 Rpl31-ps17-201ENSMUST00000097040 378 ntBASIC6.09□□□□□ -1.43
Trafd1Q3UDK1 Ryr3-201ENSMUST00000080673 15422 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
Trafd1Q3UDK1 AC120375.1-201ENSMUST00000227034 3612 ntBASIC6.09□□□□□ -1.43
Trafd1Q3UDK1 AC160029.1-201ENSMUST00000219628 2678 ntBASIC6.09□□□□□ -1.44
Trafd1Q3UDK1 Olfr1474-203ENSMUST00000220113 1539 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
Trafd1Q3UDK1 Tmprss11b-201ENSMUST00000038448 4171 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Trafd1Q3UDK1 Gm43211-201ENSMUST00000196901 1899 ntBASIC6.09□□□□□ -1.44
Trafd1Q3UDK1 Pus10-201ENSMUST00000020520 1813 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Trafd1Q3UDK1 Gm20075-201ENSMUST00000220449 2161 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Trafd1Q3UDK1 Olfr536-204ENSMUST00000215340 3938 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Trafd1Q3UDK1 Sirpb1c-204ENSMUST00000108352 1436 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Trafd1Q3UDK1 4932435O22Rik-202ENSMUST00000148405 3406 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Trafd1Q3UDK1 Gm4922-202ENSMUST00000216654 2357 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Trafd1Q3UDK1 Gm42894-201ENSMUST00000200788 3390 ntBASIC6.08□□□□□ -1.44
Trafd1Q3UDK1 Olfr39-202ENSMUST00000212983 2028 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
Trafd1Q3UDK1 Olfr532-203ENSMUST00000213801 4232 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Trafd1Q3UDK1 Xpr1-201ENSMUST00000027741 7492 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Trafd1Q3UDK1 Ubtfl1-201ENSMUST00000098973 1649 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Trafd1Q3UDK1 Gm42507-201ENSMUST00000201187 2555 ntBASIC6.08□□□□□ -1.44
Trafd1Q3UDK1 Fcgr2b-201ENSMUST00000027966 3544 ntAPPRIS P4 TSL 1 (best) BASIC6.08□□□□□ -1.44
Trafd1Q3UDK1 Igkv15-103-201ENSMUST00000103324 375 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Trafd1Q3UDK1 Gm14326-201ENSMUST00000108928 767 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Trafd1Q3UDK1 Gm8250-201ENSMUST00000117398 774 ntBASIC6.08□□□□□ -1.44
Trafd1Q3UDK1 Gm13811-201ENSMUST00000117800 256 ntBASIC6.08□□□□□ -1.44
Trafd1Q3UDK1 Gm15502-201ENSMUST00000121449 208 ntBASIC6.08□□□□□ -1.44
Trafd1Q3UDK1 4933406K04Rik-202ENSMUST00000124363 1064 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Trafd1Q3UDK1 Apol7d-203ENSMUST00000126516 1193 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Trafd1Q3UDK1 Gm23757-201ENSMUST00000158353 100 ntBASIC6.08□□□□□ -1.44
Trafd1Q3UDK1 Gm17137-202ENSMUST00000165729 957 ntBASIC6.08□□□□□ -1.44
Trafd1Q3UDK1 Pdzph1-203ENSMUST00000177360 950 ntTSL 5 BASIC6.08□□□□□ -1.44
Trafd1Q3UDK1 Gm18006-201ENSMUST00000177411 662 ntBASIC6.08□□□□□ -1.44
Trafd1Q3UDK1 Gm5225-201ENSMUST00000178572 324 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Trafd1Q3UDK1 Gm27348-201ENSMUST00000184511 170 ntBASIC6.08□□□□□ -1.44
Trafd1Q3UDK1 Gm29111-201ENSMUST00000188823 696 ntBASIC6.08□□□□□ -1.44
Trafd1Q3UDK1 Gm28455-201ENSMUST00000189105 1290 ntBASIC6.08□□□□□ -1.44
Trafd1Q3UDK1 1700108F19Rik-206ENSMUST00000191266 857 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Trafd1Q3UDK1 Gm28584-201ENSMUST00000191489 696 ntBASIC6.08□□□□□ -1.44
Trafd1Q3UDK1 Gm38138-201ENSMUST00000193274 696 ntBASIC6.08□□□□□ -1.44
Trafd1Q3UDK1 Gm38237-201ENSMUST00000193366 376 ntBASIC6.08□□□□□ -1.44
Trafd1Q3UDK1 Gm37991-201ENSMUST00000194297 696 ntBASIC6.08□□□□□ -1.44
Trafd1Q3UDK1 Gm43126-201ENSMUST00000201546 429 ntTSL 3 BASIC6.08□□□□□ -1.44
Trafd1Q3UDK1 Gm5886-202ENSMUST00000203957 522 ntBASIC6.08□□□□□ -1.44
Trafd1Q3UDK1 Mageb16-ps2-201ENSMUST00000204513 1093 ntBASIC6.08□□□□□ -1.44
Trafd1Q3UDK1 Olfr396-ps1-202ENSMUST00000205791 633 ntBASIC6.08□□□□□ -1.44
Trafd1Q3UDK1 Gm18600-201ENSMUST00000207205 505 ntBASIC6.08□□□□□ -1.44
Trafd1Q3UDK1 2310008N11Rik-204ENSMUST00000210955 457 ntTSL 5 BASIC6.08□□□□□ -1.44
Trafd1Q3UDK1 E330011O21Rik-208ENSMUST00000211650 1225 ntTSL 5 BASIC6.08□□□□□ -1.44
Trafd1Q3UDK1 AC154295.1-201ENSMUST00000217210 621 ntTSL 3 BASIC6.08□□□□□ -1.44
Trafd1Q3UDK1 Gm2614-201ENSMUST00000223227 403 ntBASIC6.08□□□□□ -1.44
Trafd1Q3UDK1 AV026068-218ENSMUST00000223980 575 ntBASIC6.08□□□□□ -1.44
Trafd1Q3UDK1 AC156559.2-201ENSMUST00000224403 384 ntBASIC6.08□□□□□ -1.44
Trafd1Q3UDK1 Cma2-202ENSMUST00000228263 857 ntBASIC6.08□□□□□ -1.44
Trafd1Q3UDK1 Uqcrh-ps1-201ENSMUST00000038391 270 ntBASIC6.08□□□□□ -1.44
Trafd1Q3UDK1 Olfr568-201ENSMUST00000098216 942 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Trafd1Q3UDK1 Gm16523-202ENSMUST00000203640 4750 ntBASIC6.08□□□□□ -1.44
Trafd1Q3UDK1 AF366264-201ENSMUST00000071308 3157 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Trafd1Q3UDK1 Adam4-201ENSMUST00000085319 2504 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Trafd1Q3UDK1 Zfp106-211ENSMUST00000171215 6391 ntTSL 5 BASIC6.08□□□□□ -1.44
Trafd1Q3UDK1 Gm37079-201ENSMUST00000194114 2135 ntBASIC6.08□□□□□ -1.44
Trafd1Q3UDK1 Tmprss15-201ENSMUST00000023566 4177 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
Trafd1Q3UDK1 Tmem56-201ENSMUST00000029777 6248 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Trafd1Q3UDK1 Tlr5-202ENSMUST00000191820 3818 ntAPPRIS ALT2 BASIC6.08□□□□□ -1.44
Trafd1Q3UDK1 Ap5m1-208ENSMUST00000228238 3514 ntBASIC6.08□□□□□ -1.44
Trafd1Q3UDK1 Dock7-202ENSMUST00000075836 6704 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
Trafd1Q3UDK1 Serpinb9-202ENSMUST00000063191 3472 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Trafd1Q3UDK1 AC118639.1-203ENSMUST00000228425 2016 ntBASIC6.08□□□□□ -1.44
Trafd1Q3UDK1 Klrk1-205ENSMUST00000168919 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Trafd1Q3UDK1 Gm6145-206ENSMUST00000211251 2850 ntTSL 5 BASIC6.08□□□□□ -1.44
Trafd1Q3UDK1 Ubr4-212ENSMUST00000165860 15798 ntTSL 5 BASIC6.08□□□□□ -1.44
Trafd1Q3UDK1 Pcdh15-211ENSMUST00000126920 6866 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
Trafd1Q3UDK1 Vmn2r22-201ENSMUST00000170808 2562 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Trafd1Q3UDK1 Gm12057-201ENSMUST00000117244 1427 ntBASIC6.08□□□□□ -1.44
Trafd1Q3UDK1 Gm37289-201ENSMUST00000195409 1402 ntBASIC6.08□□□□□ -1.44
Trafd1Q3UDK1 AC156163.1-201ENSMUST00000215598 3369 ntBASIC6.07□□□□□ -1.44
Trafd1Q3UDK1 Trhr-201ENSMUST00000038856 3608 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Trafd1Q3UDK1 AC155710.1-201ENSMUST00000219913 1353 ntBASIC6.07□□□□□ -1.44
Trafd1Q3UDK1 Gm37685-201ENSMUST00000193507 2177 ntBASIC6.07□□□□□ -1.44
Trafd1Q3UDK1 Pias1-201ENSMUST00000098651 5564 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Trafd1Q3UDK1 Ncoa7-208ENSMUST00000215926 2875 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Trafd1Q3UDK1 Tex48-201ENSMUST00000102861 677 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Trafd1Q3UDK1 Traj18-201ENSMUST00000103723 66 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Trafd1Q3UDK1 Gm11902-201ENSMUST00000118849 270 ntBASIC6.07□□□□□ -1.44
Trafd1Q3UDK1 Gm13493-201ENSMUST00000120318 493 ntBASIC6.07□□□□□ -1.44
Trafd1Q3UDK1 Vmn1r-ps111-201ENSMUST00000121014 997 ntBASIC6.07□□□□□ -1.44
Trafd1Q3UDK1 Vmn1r208-201ENSMUST00000124841 927 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Trafd1Q3UDK1 Gm11184-201ENSMUST00000126437 268 ntTSL 3 BASIC6.07□□□□□ -1.44
Trafd1Q3UDK1 3100003L05Rik-201ENSMUST00000130240 664 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Trafd1Q3UDK1 Gm4660-201ENSMUST00000131499 403 ntBASIC6.07□□□□□ -1.44
Trafd1Q3UDK1 Rpl35a-ps5-201ENSMUST00000137013 333 ntBASIC6.07□□□□□ -1.44
Trafd1Q3UDK1 Gm5125-201ENSMUST00000148614 624 ntBASIC6.07□□□□□ -1.44
Trafd1Q3UDK1 Gm16269-201ENSMUST00000160532 409 ntBASIC6.07□□□□□ -1.44
Trafd1Q3UDK1 Mir5107-201ENSMUST00000175586 88 ntBASIC6.07□□□□□ -1.44
Trafd1Q3UDK1 Gm21560-202ENSMUST00000177670 618 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
Trafd1Q3UDK1 Gm3269-202ENSMUST00000178137 618 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
Trafd1Q3UDK1 Gm3099-202ENSMUST00000178274 618 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
Trafd1Q3UDK1 Gm3642-202ENSMUST00000179296 618 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
Trafd1Q3UDK1 Gm3594-203ENSMUST00000179747 618 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
Trafd1Q3UDK1 Gm26557-201ENSMUST00000180756 493 ntBASIC6.07□□□□□ -1.44
Trafd1Q3UDK1 Gm27602-201ENSMUST00000183861 111 ntBASIC6.07□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 92.8 ms