Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 CT010431.1-201ENSMUST00000221249 1080 ntBASIC6.49□□□□□ -1.37
Trim43aQ3TL54 9130015A21Rik-202ENSMUST00000222153 837 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Trim43aQ3TL54 Gm9267-201ENSMUST00000222831 404 ntBASIC6.49□□□□□ -1.37
Trim43aQ3TL54 CT030195.1-201ENSMUST00000223887 378 ntBASIC6.49□□□□□ -1.37
Trim43aQ3TL54 AC118250.1-201ENSMUST00000228569 875 ntBASIC6.49□□□□□ -1.37
Trim43aQ3TL54 Ms4a4b-201ENSMUST00000035258 1244 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Trim43aQ3TL54 AC121997.2-201ENSMUST00000228095 2294 ntBASIC6.49□□□□□ -1.37
Trim43aQ3TL54 Olfr193-203ENSMUST00000208455 2855 ntAPPRIS P1 TSL 3 BASIC6.49□□□□□ -1.37
Trim43aQ3TL54 Neto2-203ENSMUST00000209479 4936 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Trim43aQ3TL54 Kif27-201ENSMUST00000043605 4462 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Trim43aQ3TL54 Gm45632-201ENSMUST00000211532 1888 ntBASIC6.49□□□□□ -1.37
Trim43aQ3TL54 Pira2-201ENSMUST00000108615 3462 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Trim43aQ3TL54 Gm15922-201ENSMUST00000118068 3462 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Trim43aQ3TL54 Smad2-203ENSMUST00000113930 1305 ntTSL 5 BASIC6.49□□□□□ -1.37
Trim43aQ3TL54 Agl-201ENSMUST00000040603 9625 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Trim43aQ3TL54 Fam205c-201ENSMUST00000055944 1655 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Trim43aQ3TL54 Kat6b-ps1-201ENSMUST00000187624 3433 ntBASIC6.48□□□□□ -1.37
Trim43aQ3TL54 AC158232.1-202ENSMUST00000218352 3343 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Trim43aQ3TL54 Plekhg1-201ENSMUST00000042438 7190 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Trim43aQ3TL54 Olfr292-201ENSMUST00000080165 3211 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
Trim43aQ3TL54 Cts8-201ENSMUST00000021891 2505 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Trim43aQ3TL54 Zfp994-201ENSMUST00000179996 4880 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Trim43aQ3TL54 AU023762-203ENSMUST00000209897 2179 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Trim43aQ3TL54 Mad2l1-202ENSMUST00000116605 7557 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Trim43aQ3TL54 Dlg2-204ENSMUST00000107196 7490 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Trim43aQ3TL54 Stk32a-201ENSMUST00000045477 3765 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Trim43aQ3TL54 Zfp867-201ENSMUST00000057799 3412 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Trim43aQ3TL54 Gm38085-201ENSMUST00000195785 3062 ntBASIC6.48□□□□□ -1.37
Trim43aQ3TL54 Hephl1-201ENSMUST00000159985 5261 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Trim43aQ3TL54 Igkv5-43-201ENSMUST00000103368 379 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Trim43aQ3TL54 Tcrg-V6-201ENSMUST00000103555 403 ntAPPRIS ALT2 BASIC6.48□□□□□ -1.37
Trim43aQ3TL54 Gm22284-201ENSMUST00000104132 132 ntBASIC6.48□□□□□ -1.37
Trim43aQ3TL54 Gm14326-201ENSMUST00000108928 767 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Trim43aQ3TL54 Gm13818-201ENSMUST00000119441 511 ntBASIC6.48□□□□□ -1.37
Trim43aQ3TL54 Vmn1r-ps111-201ENSMUST00000121014 997 ntBASIC6.48□□□□□ -1.37
Trim43aQ3TL54 Gm11472-201ENSMUST00000121305 556 ntBASIC6.48□□□□□ -1.37
Trim43aQ3TL54 Gm12152-201ENSMUST00000122465 684 ntBASIC6.48□□□□□ -1.37
Trim43aQ3TL54 Vmn1r208-201ENSMUST00000124841 927 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Trim43aQ3TL54 Gm15787-206ENSMUST00000141008 585 ntTSL 2 BASIC6.48□□□□□ -1.37
Trim43aQ3TL54 Ttc39aos1-201ENSMUST00000150239 796 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Trim43aQ3TL54 Gm22223-201ENSMUST00000157360 125 ntBASIC6.48□□□□□ -1.37
Trim43aQ3TL54 Gm16028-201ENSMUST00000162347 890 ntTSL 5 BASIC6.48□□□□□ -1.37
Trim43aQ3TL54 Mup8-202ENSMUST00000163931 986 ntAPPRIS P3 TSL 5 BASIC6.48□□□□□ -1.37
Trim43aQ3TL54 Gm11107-201ENSMUST00000165414 505 ntBASIC6.48□□□□□ -1.37
Trim43aQ3TL54 Vmn2r-ps37-201ENSMUST00000174682 1044 ntBASIC6.48□□□□□ -1.37
Trim43aQ3TL54 Gm10428-201ENSMUST00000178750 399 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Trim43aQ3TL54 Gm26804-201ENSMUST00000181248 1017 ntTSL 5 BASIC6.48□□□□□ -1.37
Trim43aQ3TL54 Gm27006-201ENSMUST00000182218 943 ntBASIC6.48□□□□□ -1.37
Trim43aQ3TL54 Olr1-203ENSMUST00000182784 570 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Trim43aQ3TL54 Lax1-202ENSMUST00000189524 628 ntTSL 2 BASIC6.48□□□□□ -1.37
Trim43aQ3TL54 AC099760.1-201ENSMUST00000196300 153 ntBASIC6.48□□□□□ -1.37
Trim43aQ3TL54 Gm43743-202ENSMUST00000198353 491 ntBASIC6.48□□□□□ -1.37
Trim43aQ3TL54 Gm32005-201ENSMUST00000212446 959 ntTSL 5 BASIC6.48□□□□□ -1.37
Trim43aQ3TL54 Asf1a-204ENSMUST00000219271 725 ntTSL 5 BASIC6.48□□□□□ -1.37
Trim43aQ3TL54 AC105950.1-201ENSMUST00000222637 408 ntBASIC6.48□□□□□ -1.37
Trim43aQ3TL54 AC158750.1-201ENSMUST00000226163 634 ntBASIC6.48□□□□□ -1.37
Trim43aQ3TL54 AC129537.1-201ENSMUST00000226596 1228 ntBASIC6.48□□□□□ -1.37
Trim43aQ3TL54 AC135086.1-201ENSMUST00000228621 817 ntBASIC6.48□□□□□ -1.37
Trim43aQ3TL54 Il20-201ENSMUST00000027673 1186 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Trim43aQ3TL54 Tceal8-201ENSMUST00000060101 1250 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Trim43aQ3TL54 Gm22300-201ENSMUST00000082661 126 ntBASIC6.48□□□□□ -1.37
Trim43aQ3TL54 Vmn1r83-201ENSMUST00000086229 996 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Trim43aQ3TL54 Rps19-ps4-201ENSMUST00000091925 438 ntBASIC6.48□□□□□ -1.37
Trim43aQ3TL54 Stx17-202ENSMUST00000107720 5770 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Trim43aQ3TL54 Gm39214-201ENSMUST00000210912 1542 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Trim43aQ3TL54 Kcnma1-202ENSMUST00000074983 3974 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
Trim43aQ3TL54 Gm43190-201ENSMUST00000187850 1779 ntBASIC6.48□□□□□ -1.37
Trim43aQ3TL54 Trp53bp1-202ENSMUST00000110648 9621 ntAPPRIS P3 TSL 5 BASIC6.48□□□□□ -1.37
Trim43aQ3TL54 AC121870.1-201ENSMUST00000216279 4879 ntBASIC6.48□□□□□ -1.37
Trim43aQ3TL54 Prrc2c-201ENSMUST00000028016 8815 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
Trim43aQ3TL54 Gm43386-201ENSMUST00000199654 4001 ntBASIC6.48□□□□□ -1.37
Trim43aQ3TL54 A730017C20Rik-205ENSMUST00000165666 1911 ntAPPRIS P2 TSL 2 BASIC6.48□□□□□ -1.37
Trim43aQ3TL54 Gcnt1-201ENSMUST00000169897 4594 ntAPPRIS P1 TSL 3 BASIC6.48□□□□□ -1.37
Trim43aQ3TL54 Hdlbp-204ENSMUST00000186164 3808 ntTSL 5 BASIC6.48□□□□□ -1.37
Trim43aQ3TL54 Xcr1-201ENSMUST00000182350 4453 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Trim43aQ3TL54 Vcan-203ENSMUST00000109546 12427 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Trim43aQ3TL54 Olfr204-202ENSMUST00000216261 5371 ntAPPRIS P1 TSL 3 BASIC6.48□□□□□ -1.37
Trim43aQ3TL54 Serpinb6e-201ENSMUST00000110275 1494 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Trim43aQ3TL54 Mgat4a-206ENSMUST00000154819 2796 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Trim43aQ3TL54 Dclre1c-204ENSMUST00000115066 3828 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Trim43aQ3TL54 Mtus1-205ENSMUST00000118835 6426 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Trim43aQ3TL54 Aak1-202ENSMUST00000089519 19341 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Trim43aQ3TL54 Son-205ENSMUST00000122302 2449 ntTSL 5 BASIC6.47□□□□□ -1.37
Trim43aQ3TL54 Gm38126-201ENSMUST00000195297 4003 ntBASIC6.47□□□□□ -1.37
Trim43aQ3TL54 Gm15910-201ENSMUST00000127564 2971 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Trim43aQ3TL54 Serpinb9g-201ENSMUST00000081927 1927 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Trim43aQ3TL54 Fcgr2b-201ENSMUST00000027966 3544 ntAPPRIS P4 TSL 1 (best) BASIC6.47□□□□□ -1.37
Trim43aQ3TL54 Tcf7l2-202ENSMUST00000061496 4053 ntAPPRIS P3 TSL 5 BASIC6.47□□□□□ -1.37
Trim43aQ3TL54 Vmn1r203-203ENSMUST00000228889 8213 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Trim43aQ3TL54 Traj17-201ENSMUST00000103724 63 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Trim43aQ3TL54 Olfr585-201ENSMUST00000104881 1030 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Trim43aQ3TL54 Gm13183-201ENSMUST00000118615 789 ntBASIC6.47□□□□□ -1.37
Trim43aQ3TL54 Gm11445-201ENSMUST00000119101 532 ntBASIC6.47□□□□□ -1.37
Trim43aQ3TL54 Gm5793-201ENSMUST00000119393 630 ntBASIC6.47□□□□□ -1.37
Trim43aQ3TL54 Gm4914-201ENSMUST00000119757 459 ntBASIC6.47□□□□□ -1.37
Trim43aQ3TL54 Gm12506-201ENSMUST00000123620 806 ntTSL 5 BASIC6.47□□□□□ -1.37
Trim43aQ3TL54 Gm10658-201ENSMUST00000128125 1241 ntTSL 2 BASIC6.47□□□□□ -1.37
Trim43aQ3TL54 4930587A21Rik-201ENSMUST00000128588 851 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Trim43aQ3TL54 Cfap61-212ENSMUST00000152515 640 ntTSL 3 BASIC6.47□□□□□ -1.37
Trim43aQ3TL54 Vmn1r176-201ENSMUST00000171073 915 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 89.4 ms