Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Gm15740-201ENSMUST00000159703 1292 ntBASIC6.88□□□□□ -1.31
Ebf1Q07802 Gm16231-201ENSMUST00000160432 319 ntTSL 3 BASIC6.88□□□□□ -1.31
Ebf1Q07802 Gm11107-201ENSMUST00000165414 505 ntBASIC6.88□□□□□ -1.31
Ebf1Q07802 Gm20405-201ENSMUST00000174002 229 ntTSL 5 BASIC6.88□□□□□ -1.31
Ebf1Q07802 Gm28782-201ENSMUST00000185980 414 ntTSL 3 BASIC6.88□□□□□ -1.31
Ebf1Q07802 Gm29385-201ENSMUST00000186831 363 ntBASIC6.88□□□□□ -1.31
Ebf1Q07802 Gm28113-201ENSMUST00000188280 229 ntBASIC6.88□□□□□ -1.31
Ebf1Q07802 Gm37689-201ENSMUST00000193139 275 ntBASIC6.88□□□□□ -1.31
Ebf1Q07802 Gm19185-201ENSMUST00000196365 643 ntBASIC6.88□□□□□ -1.31
Ebf1Q07802 Gm32585-201ENSMUST00000198586 764 ntTSL 3 BASIC6.88□□□□□ -1.31
Ebf1Q07802 Gm44665-201ENSMUST00000205381 251 ntBASIC6.88□□□□□ -1.31
Ebf1Q07802 Olfr369-ps1-201ENSMUST00000212589 836 ntBASIC6.88□□□□□ -1.31
Ebf1Q07802 Gm45782-201ENSMUST00000212670 366 ntBASIC6.88□□□□□ -1.31
Ebf1Q07802 AC127581.1-201ENSMUST00000214084 771 ntTSL 5 BASIC6.88□□□□□ -1.31
Ebf1Q07802 AC153537.1-201ENSMUST00000215530 858 ntTSL 5 BASIC6.88□□□□□ -1.31
Ebf1Q07802 4930521O17Rik-201ENSMUST00000219339 491 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Ebf1Q07802 Gm7252-201ENSMUST00000223284 456 ntBASIC6.88□□□□□ -1.31
Ebf1Q07802 AC107663.1-201ENSMUST00000224257 468 ntBASIC6.88□□□□□ -1.31
Ebf1Q07802 AC113031.2-201ENSMUST00000226132 579 ntBASIC6.88□□□□□ -1.31
Ebf1Q07802 Olfr788-201ENSMUST00000056961 936 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Ebf1Q07802 Olfr801-201ENSMUST00000072063 957 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Ebf1Q07802 Olfr1276-201ENSMUST00000073322 939 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Ebf1Q07802 AW822073-201ENSMUST00000075305 555 ntBASIC6.88□□□□□ -1.31
Ebf1Q07802 Vmn1r229-201ENSMUST00000076759 921 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Ebf1Q07802 Olfr814-201ENSMUST00000081367 933 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Ebf1Q07802 Mir135a-1-201ENSMUST00000083473 90 ntBASIC6.88□□□□□ -1.31
Ebf1Q07802 Olfr877-201ENSMUST00000086063 936 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Ebf1Q07802 Lrrc51-202ENSMUST00000098236 949 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Ebf1Q07802 Acox1-202ENSMUST00000072948 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Ebf1Q07802 5031410I06Rik-201ENSMUST00000063524 2995 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Ebf1Q07802 Gm7347-201ENSMUST00000095004 2995 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Ebf1Q07802 E030022I16Rik-201ENSMUST00000215131 2766 ntBASIC6.88□□□□□ -1.31
Ebf1Q07802 Zwint-202ENSMUST00000105431 2676 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Ebf1Q07802 Prkd3-208ENSMUST00000168887 5884 ntAPPRIS P3 TSL 5 BASIC6.88□□□□□ -1.31
Ebf1Q07802 BC028471-203ENSMUST00000202022 4113 ntTSL 2 BASIC6.88□□□□□ -1.31
Ebf1Q07802 Ntrk3-202ENSMUST00000039438 3977 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Ebf1Q07802 Gm13102-202ENSMUST00000097800 2293 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
Ebf1Q07802 Kirrel3os-201ENSMUST00000066604 3799 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Ebf1Q07802 Zfp14-203ENSMUST00000207873 3411 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Ebf1Q07802 Usp14-202ENSMUST00000116669 2019 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Ebf1Q07802 Ccdc82-206ENSMUST00000217444 4736 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Ebf1Q07802 Arhgap15-203ENSMUST00000112824 3118 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Ebf1Q07802 Gm26807-201ENSMUST00000181132 4363 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Ebf1Q07802 Scaper-204ENSMUST00000216595 2911 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Ebf1Q07802 Ppp1r9a-201ENSMUST00000035813 9547 ntAPPRIS P2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Ebf1Q07802 Slc26a5-202ENSMUST00000115176 2768 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Ebf1Q07802 Zfp345-201ENSMUST00000109914 2734 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Ebf1Q07802 Gm37914-201ENSMUST00000195317 2679 ntBASIC6.87□□□□□ -1.31
Ebf1Q07802 C1s2-202ENSMUST00000218020 2662 ntAPPRIS P2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Ebf1Q07802 C1s2-201ENSMUST00000068797 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Ebf1Q07802 Serpina1f-203ENSMUST00000118101 1453 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Ebf1Q07802 Olfr1055-203ENSMUST00000213564 1444 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Ebf1Q07802 Tex11-201ENSMUST00000009814 3250 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
Ebf1Q07802 Gabpb2-205ENSMUST00000136139 8661 ntAPPRIS P2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Ebf1Q07802 Gm19024-201ENSMUST00000194681 1319 ntBASIC6.87□□□□□ -1.31
Ebf1Q07802 AC131667.1-201ENSMUST00000214665 2175 ntBASIC6.87□□□□□ -1.31
Ebf1Q07802 Gm36527-201ENSMUST00000195500 3029 ntBASIC6.87□□□□□ -1.31
Ebf1Q07802 Igkv11-106-201ENSMUST00000103331 346 ntBASIC6.87□□□□□ -1.31
Ebf1Q07802 Gm23748-201ENSMUST00000104227 131 ntBASIC6.87□□□□□ -1.31
Ebf1Q07802 n-R5s72-201ENSMUST00000104518 119 ntBASIC6.87□□□□□ -1.31
Ebf1Q07802 Gm12790-201ENSMUST00000106916 951 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Ebf1Q07802 Gm11833-201ENSMUST00000118393 853 ntBASIC6.87□□□□□ -1.31
Ebf1Q07802 Gm12101-201ENSMUST00000121590 390 ntBASIC6.87□□□□□ -1.31
Ebf1Q07802 Gm13237-201ENSMUST00000122151 635 ntBASIC6.87□□□□□ -1.31
Ebf1Q07802 Gm12506-201ENSMUST00000123620 806 ntTSL 5 BASIC6.87□□□□□ -1.31
Ebf1Q07802 Gm16249-201ENSMUST00000124055 1258 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Ebf1Q07802 Gm12833-201ENSMUST00000136112 477 ntBASIC6.87□□□□□ -1.31
Ebf1Q07802 Gm15471-201ENSMUST00000145893 625 ntTSL 2 BASIC6.87□□□□□ -1.31
Ebf1Q07802 Platr3-201ENSMUST00000146980 412 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Ebf1Q07802 Gm11335-201ENSMUST00000148743 1080 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Ebf1Q07802 2810442N19Rik-202ENSMUST00000161583 919 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Ebf1Q07802 Gm17377-201ENSMUST00000165184 207 ntBASIC6.87□□□□□ -1.31
Ebf1Q07802 Gm21962-201ENSMUST00000166899 1017 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Ebf1Q07802 Vmn2r-ps72-201ENSMUST00000172586 907 ntBASIC6.87□□□□□ -1.31
Ebf1Q07802 Gm23968-201ENSMUST00000175047 125 ntBASIC6.87□□□□□ -1.31
Ebf1Q07802 Il6st-204ENSMUST00000183829 612 ntTSL 5 BASIC6.87□□□□□ -1.31
Ebf1Q07802 Gm27972-201ENSMUST00000184720 137 ntBASIC6.87□□□□□ -1.31
Ebf1Q07802 Gm29395-201ENSMUST00000188551 1049 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Ebf1Q07802 Gm8883-204ENSMUST00000189680 699 ntTSL 2 BASIC6.87□□□□□ -1.31
Ebf1Q07802 Gm2229-201ENSMUST00000193328 710 ntBASIC6.87□□□□□ -1.31
Ebf1Q07802 Gm42443-201ENSMUST00000198084 1155 ntBASIC6.87□□□□□ -1.31
Ebf1Q07802 1700126G02Rik-201ENSMUST00000204351 725 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Ebf1Q07802 Gm4374-201ENSMUST00000204929 424 ntBASIC6.87□□□□□ -1.31
Ebf1Q07802 Gm44730-201ENSMUST00000205902 716 ntTSL 3 BASIC6.87□□□□□ -1.31
Ebf1Q07802 Gm44571-201ENSMUST00000208092 533 ntBASIC6.87□□□□□ -1.31
Ebf1Q07802 Olfr65-202ENSMUST00000209528 1106 ntAPPRIS P2 BASIC6.87□□□□□ -1.31
Ebf1Q07802 Axdnd1-210ENSMUST00000212747 1238 ntTSL 5 BASIC6.87□□□□□ -1.31
Ebf1Q07802 Olfr956-ps1-201ENSMUST00000216492 867 ntBASIC6.87□□□□□ -1.31
Ebf1Q07802 Glrx-202ENSMUST00000220523 493 ntTSL 3 BASIC6.87□□□□□ -1.31
Ebf1Q07802 Gm19134-201ENSMUST00000221203 487 ntBASIC6.87□□□□□ -1.31
Ebf1Q07802 AC163621.2-201ENSMUST00000222229 682 ntBASIC6.87□□□□□ -1.31
Ebf1Q07802 AC162183.1-202ENSMUST00000225434 904 ntBASIC6.87□□□□□ -1.31
Ebf1Q07802 Cma2-202ENSMUST00000228263 857 ntBASIC6.87□□□□□ -1.31
Ebf1Q07802 Lcn12-201ENSMUST00000028312 716 ntAPPRIS P2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Ebf1Q07802 Rps29-201ENSMUST00000037023 390 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Ebf1Q07802 Vmn1r80-201ENSMUST00000075053 927 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Ebf1Q07802 Mir138-1-201ENSMUST00000083480 99 ntBASIC6.87□□□□□ -1.31
Ebf1Q07802 Gm44677-201ENSMUST00000209151 3739 ntBASIC6.87□□□□□ -1.31
Ebf1Q07802 Tmprss15-202ENSMUST00000060402 3681 ntAPPRIS ALT2 TSL 2 BASIC6.87□□□□□ -1.31
Ebf1Q07802 AC155234.1-201ENSMUST00000225610 2823 ntBASIC6.87□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 318.2 ms