Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Gm42998-201ENSMUST00000197053 2371 ntBASIC7.31□□□□□ -1.24
Hmgb1P63158 Hivep3-202ENSMUST00000106307 11838 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Hmgb1P63158 Fryl-201ENSMUST00000094700 9852 ntAPPRIS P1 TSL 2 BASIC7.31□□□□□ -1.24
Hmgb1P63158 March1-203ENSMUST00000098708 4000 ntAPPRIS P3 TSL 5 BASIC7.3□□□□□ -1.24
Hmgb1P63158 Serpina1f-203ENSMUST00000118101 1453 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Hmgb1P63158 Gm46348-201ENSMUST00000222917 2151 ntTSL 5 BASIC7.3□□□□□ -1.24
Hmgb1P63158 1700080N15Rik-202ENSMUST00000154360 1316 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Hmgb1P63158 C530050E15Rik-201ENSMUST00000181373 3837 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Hmgb1P63158 Mgam-206ENSMUST00000202779 3821 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Hmgb1P63158 Arhgap15-203ENSMUST00000112824 3118 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Hmgb1P63158 Matr3-205ENSMUST00000186796 1854 ntTSL 5 BASIC7.3□□□□□ -1.24
Hmgb1P63158 Gm15910-201ENSMUST00000127564 2971 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Hmgb1P63158 Npy2r-201ENSMUST00000029633 3364 ntAPPRIS P1 TSL 2 BASIC7.3□□□□□ -1.24
Hmgb1P63158 Prkag2os2-201ENSMUST00000123610 1432 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Hmgb1P63158 Sntg1-210ENSMUST00000191683 4510 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Hmgb1P63158 Gm10723-201ENSMUST00000195366 6918 ntBASIC7.3□□□□□ -1.24
Hmgb1P63158 Gm8281-201ENSMUST00000100893 612 ntTSL 5 BASIC7.3□□□□□ -1.24
Hmgb1P63158 Gm11889-201ENSMUST00000118402 1079 ntBASIC7.3□□□□□ -1.24
Hmgb1P63158 Vmn1r-ps95-201ENSMUST00000118641 903 ntBASIC7.3□□□□□ -1.24
Hmgb1P63158 Gm14584-201ENSMUST00000118956 637 ntBASIC7.3□□□□□ -1.24
Hmgb1P63158 Gm11653-201ENSMUST00000119992 1009 ntBASIC7.3□□□□□ -1.24
Hmgb1P63158 Llph-ps1-201ENSMUST00000121281 390 ntBASIC7.3□□□□□ -1.24
Hmgb1P63158 Gm15056-201ENSMUST00000122025 549 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
Hmgb1P63158 Gm15584-201ENSMUST00000123231 759 ntTSL 2 BASIC7.3□□□□□ -1.24
Hmgb1P63158 Gm15991-201ENSMUST00000127631 942 ntTSL 5 BASIC7.3□□□□□ -1.24
Hmgb1P63158 Gm12249-201ENSMUST00000132323 719 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Hmgb1P63158 Gm15522-201ENSMUST00000134467 785 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Hmgb1P63158 Gm15407-201ENSMUST00000136919 634 ntTSL 3 BASIC7.3□□□□□ -1.24
Hmgb1P63158 Gm9672-201ENSMUST00000166437 425 ntBASIC7.3□□□□□ -1.24
Hmgb1P63158 n-R5s109-201ENSMUST00000179195 119 ntBASIC7.3□□□□□ -1.24
Hmgb1P63158 Gm21761-201ENSMUST00000179502 516 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Hmgb1P63158 Gm26654-201ENSMUST00000180455 256 ntTSL 3 BASIC7.3□□□□□ -1.24
Hmgb1P63158 4930521E06Rik-201ENSMUST00000186732 905 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Hmgb1P63158 Gm28502-201ENSMUST00000189781 476 ntTSL 2 BASIC7.3□□□□□ -1.24
Hmgb1P63158 Gm21715-201ENSMUST00000191056 694 ntBASIC7.3□□□□□ -1.24
Hmgb1P63158 Gm38330-201ENSMUST00000192743 959 ntBASIC7.3□□□□□ -1.24
Hmgb1P63158 Gm37679-201ENSMUST00000192868 1192 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Hmgb1P63158 Gm43357-201ENSMUST00000197132 342 ntTSL 3 BASIC7.3□□□□□ -1.24
Hmgb1P63158 Gm7463-201ENSMUST00000201541 547 ntBASIC7.3□□□□□ -1.24
Hmgb1P63158 Gm45514-201ENSMUST00000211531 689 ntBASIC7.3□□□□□ -1.24
Hmgb1P63158 Axdnd1-210ENSMUST00000212747 1238 ntTSL 5 BASIC7.3□□□□□ -1.24
Hmgb1P63158 Gm39363-201ENSMUST00000214251 723 ntTSL 3 BASIC7.3□□□□□ -1.24
Hmgb1P63158 Olfr1092-ps1-201ENSMUST00000216544 398 ntBASIC7.3□□□□□ -1.24
Hmgb1P63158 Gm8275-201ENSMUST00000219732 424 ntBASIC7.3□□□□□ -1.24
Hmgb1P63158 AC154558.1-201ENSMUST00000222278 415 ntBASIC7.3□□□□□ -1.24
Hmgb1P63158 Gm7252-201ENSMUST00000223284 456 ntBASIC7.3□□□□□ -1.24
Hmgb1P63158 AC156559.1-201ENSMUST00000224158 222 ntBASIC7.3□□□□□ -1.24
Hmgb1P63158 AL645546.2-201ENSMUST00000224526 265 ntBASIC7.3□□□□□ -1.24
Hmgb1P63158 AC117769.2-201ENSMUST00000224612 469 ntBASIC7.3□□□□□ -1.24
Hmgb1P63158 4932702P03Rik-203ENSMUST00000225028 670 ntBASIC7.3□□□□□ -1.24
Hmgb1P63158 AC137871.3-201ENSMUST00000226628 225 ntBASIC7.3□□□□□ -1.24
Hmgb1P63158 AC154692.1-202ENSMUST00000226632 1231 ntBASIC7.3□□□□□ -1.24
Hmgb1P63158 AC154640.1-202ENSMUST00000227828 496 ntBASIC7.3□□□□□ -1.24
Hmgb1P63158 Olfr250-201ENSMUST00000052085 996 ntAPPRIS P2 BASIC7.3□□□□□ -1.24
Hmgb1P63158 Olfr8-201ENSMUST00000081571 933 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Hmgb1P63158 n-R5s89-201ENSMUST00000083532 104 ntBASIC7.3□□□□□ -1.24
Hmgb1P63158 Eif2s3x-201ENSMUST00000050328 3647 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Hmgb1P63158 AC103672.3-201ENSMUST00000227649 3243 ntBASIC7.3□□□□□ -1.24
Hmgb1P63158 AC152946.1-201ENSMUST00000218446 3474 ntTSL 5 BASIC7.3□□□□□ -1.24
Hmgb1P63158 Dock2-202ENSMUST00000101364 1616 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Hmgb1P63158 Vmn1r173-202ENSMUST00000226233 9416 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Hmgb1P63158 Gm43887-201ENSMUST00000204727 3186 ntBASIC7.3□□□□□ -1.24
Hmgb1P63158 Abca14-201ENSMUST00000084640 5384 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Hmgb1P63158 Glyat-202ENSMUST00000119960 3296 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Hmgb1P63158 AC131068.3-201ENSMUST00000228438 1456 ntBASIC7.3□□□□□ -1.24
Hmgb1P63158 Gm29825-201ENSMUST00000214237 3775 ntTSL 5 BASIC7.3□□□□□ -1.24
Hmgb1P63158 Atf2-202ENSMUST00000090802 4016 ntTSL 5 BASIC7.3□□□□□ -1.24
Hmgb1P63158 Oprk1-203ENSMUST00000160339 2481 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
Hmgb1P63158 Nipa2-203ENSMUST00000119041 2979 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
Hmgb1P63158 AC124680.1-201ENSMUST00000223923 1585 ntBASIC7.29□□□□□ -1.24
Hmgb1P63158 AC153143.2-201ENSMUST00000220999 1804 ntBASIC7.29□□□□□ -1.24
Hmgb1P63158 Fbxw26-201ENSMUST00000071917 1824 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Hmgb1P63158 Prox1-202ENSMUST00000175916 7913 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Hmgb1P63158 Tpx2-207ENSMUST00000178997 4161 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Hmgb1P63158 Mybpc1-202ENSMUST00000121629 3922 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
Hmgb1P63158 Gm43788-201ENSMUST00000201539 2417 ntBASIC7.29□□□□□ -1.24
Hmgb1P63158 Olfr600-202ENSMUST00000215042 3527 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
Hmgb1P63158 Gramd1b-204ENSMUST00000121357 7334 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Hmgb1P63158 Zfp27-202ENSMUST00000159920 3381 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
Hmgb1P63158 Nlrp4a-202ENSMUST00000119386 3215 ntAPPRIS P2 TSL 1 (best) BASIC7.29□□□□□ -1.24
Hmgb1P63158 Gm22781-201ENSMUST00000104083 137 ntBASIC7.29□□□□□ -1.24
Hmgb1P63158 Eqtn-202ENSMUST00000107097 1164 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
Hmgb1P63158 Gm11077-201ENSMUST00000111844 84 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
Hmgb1P63158 Gm13423-201ENSMUST00000117205 888 ntBASIC7.29□□□□□ -1.24
Hmgb1P63158 Cox7c-203ENSMUST00000131011 540 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Hmgb1P63158 Pramef12os-201ENSMUST00000133334 767 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Hmgb1P63158 Mir5100-201ENSMUST00000174993 64 ntBASIC7.29□□□□□ -1.24
Hmgb1P63158 Scgb2a2-201ENSMUST00000179814 1107 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
Hmgb1P63158 4933416M07Rik-201ENSMUST00000181424 624 ntTSL 5 BASIC7.29□□□□□ -1.24
Hmgb1P63158 Gm28739-201ENSMUST00000185415 696 ntBASIC7.29□□□□□ -1.24
Hmgb1P63158 Gm28219-201ENSMUST00000185452 696 ntBASIC7.29□□□□□ -1.24
Hmgb1P63158 Gm28542-201ENSMUST00000185545 696 ntBASIC7.29□□□□□ -1.24
Hmgb1P63158 Gm28303-201ENSMUST00000185642 747 ntBASIC7.29□□□□□ -1.24
Hmgb1P63158 Gm29244-201ENSMUST00000185825 696 ntBASIC7.29□□□□□ -1.24
Hmgb1P63158 Gm29437-201ENSMUST00000185865 696 ntBASIC7.29□□□□□ -1.24
Hmgb1P63158 Gm29412-201ENSMUST00000185869 696 ntBASIC7.29□□□□□ -1.24
Hmgb1P63158 Gm28910-201ENSMUST00000185921 696 ntBASIC7.29□□□□□ -1.24
Hmgb1P63158 Gm28812-201ENSMUST00000185963 696 ntBASIC7.29□□□□□ -1.24
Hmgb1P63158 Gm29468-201ENSMUST00000185978 696 ntBASIC7.29□□□□□ -1.24
Hmgb1P63158 Gm28854-201ENSMUST00000186218 696 ntBASIC7.29□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms