Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Glrb-202ENSMUST00000107743 1101 ntTSL 5 BASIC6.22□□□□□ -1.41
HttP42859 V1rg10-201ENSMUST00000183378 937 ntBASIC6.22□□□□□ -1.41
HttP42859 Gm45096-201ENSMUST00000205833 427 ntTSL 3 BASIC6.22□□□□□ -1.41
HttP42859 Gm44893-201ENSMUST00000207259 443 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
HttP42859 Gm38843-201ENSMUST00000209189 323 ntTSL 5 BASIC6.22□□□□□ -1.41
HttP42859 Rpl18a-205ENSMUST00000212494 473 ntTSL 5 BASIC6.22□□□□□ -1.41
HttP42859 AC102542.1-201ENSMUST00000225204 1138 ntBASIC6.22□□□□□ -1.41
HttP42859 AC160120.1-201ENSMUST00000227446 663 ntBASIC6.22□□□□□ -1.41
HttP42859 Otor-201ENSMUST00000028902 949 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HttP42859 Gm22741-201ENSMUST00000083438 165 ntBASIC6.22□□□□□ -1.41
HttP42859 Zfp110-205ENSMUST00000168247 2499 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
HttP42859 Flna-203ENSMUST00000114299 8456 ntAPPRIS P2 TSL 5 BASIC6.22□□□□□ -1.41
HttP42859 Cep290-210ENSMUST00000220346 8211 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
HttP42859 Cts3-201ENSMUST00000054702 1442 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HttP42859 Zfp719-201ENSMUST00000058104 4494 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HttP42859 LOC102637012-201ENSMUST00000217248 2562 ntBASIC6.22□□□□□ -1.41
HttP42859 Slco5a1-207ENSMUST00000188454 8463 ntAPPRIS P2 TSL 5 BASIC6.22□□□□□ -1.41
HttP42859 Agtpbp1-206ENSMUST00000164215 4331 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
HttP42859 Igkv1-133-201ENSMUST00000103304 374 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
HttP42859 Ceacam13-202ENSMUST00000108488 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
HttP42859 Gm12519-201ENSMUST00000134099 693 ntTSL 5 BASIC6.22□□□□□ -1.41
HttP42859 Gm9602-202ENSMUST00000177973 615 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
HttP42859 Oaz3-201ENSMUST00000191506 732 ntAPPRIS P2 TSL 5 BASIC6.22□□□□□ -1.41
HttP42859 Gm36328-201ENSMUST00000204237 432 ntTSL 3 BASIC6.22□□□□□ -1.41
HttP42859 Gm29785-201ENSMUST00000217033 383 ntBASIC6.22□□□□□ -1.41
HttP42859 AC102569.1-204ENSMUST00000222816 793 ntTSL 3 BASIC6.22□□□□□ -1.41
HttP42859 AC132317.2-201ENSMUST00000227301 519 ntBASIC6.22□□□□□ -1.41
HttP42859 Obox7-203ENSMUST00000183788 1476 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HttP42859 Gm36388-201ENSMUST00000191663 1675 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
HttP42859 Olfr1299-201ENSMUST00000207228 1678 ntAPPRIS P1 TSL 3 BASIC6.22□□□□□ -1.41
HttP42859 Umodl1-201ENSMUST00000066554 5007 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
HttP42859 Usp17lc-202ENSMUST00000106892 2403 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HttP42859 Olfr406-202ENSMUST00000214303 2842 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
HttP42859 Gm18853-201ENSMUST00000183629 3596 ntBASIC6.22□□□□□ -1.41
HttP42859 A330015K06Rik-202ENSMUST00000195685 2196 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
HttP42859 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HttP42859 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HttP42859 Gm13770-201ENSMUST00000117149 305 ntBASIC6.21□□□□□ -1.41
HttP42859 Gm12602-202ENSMUST00000154352 707 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
HttP42859 Gm3339-201ENSMUST00000163462 475 ntBASIC6.21□□□□□ -1.41
HttP42859 Gm8265-201ENSMUST00000170469 475 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
HttP42859 Gm34176-201ENSMUST00000192621 474 ntBASIC6.21□□□□□ -1.41
HttP42859 Gm37689-201ENSMUST00000193139 275 ntBASIC6.21□□□□□ -1.41
HttP42859 4933436F18Rik-201ENSMUST00000193468 802 ntBASIC6.21□□□□□ -1.41
HttP42859 Olfr1509-203ENSMUST00000206100 1161 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.41
HttP42859 Gm2099-201ENSMUST00000220979 412 ntBASIC6.21□□□□□ -1.41
HttP42859 AC129085.2-201ENSMUST00000223763 2800 ntBASIC6.21□□□□□ -1.41
HttP42859 CT010514.1-201ENSMUST00000214088 2969 ntBASIC6.21□□□□□ -1.41
HttP42859 Olfr780-202ENSMUST00000215503 2910 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
HttP42859 Nmnat2-201ENSMUST00000043313 4626 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
HttP42859 Trps1-203ENSMUST00000183421 3446 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
HttP42859 Smpd4-203ENSMUST00000090159 4565 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
HttP42859 Olfr524-202ENSMUST00000215815 5044 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
HttP42859 Gm4787-201ENSMUST00000062182 2474 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
HttP42859 Gm29048-202ENSMUST00000190399 1601 ntTSL 5 BASIC6.21□□□□□ -1.42
HttP42859 Wdr49-201ENSMUST00000193989 2413 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
HttP42859 Gm37894-201ENSMUST00000195416 2599 ntBASIC6.21□□□□□ -1.42
HttP42859 Vmn2r111-201ENSMUST00000092491 2574 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
HttP42859 Adgrl3-205ENSMUST00000117985 4974 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
HttP42859 Adgrl3-212ENSMUST00000120144 4999 ntTSL 5 BASIC6.21□□□□□ -1.42
HttP42859 Vmn1r-ps94-201ENSMUST00000122016 458 ntBASIC6.21□□□□□ -1.42
HttP42859 Gm25278-201ENSMUST00000157267 120 ntBASIC6.21□□□□□ -1.42
HttP42859 Gm5430-201ENSMUST00000182525 915 ntBASIC6.21□□□□□ -1.42
HttP42859 Ank3-228ENSMUST00000182692 3833 ntTSL 5 BASIC6.21□□□□□ -1.42
HttP42859 Mir3473f-201ENSMUST00000183743 136 ntBASIC6.21□□□□□ -1.42
HttP42859 Gm28683-201ENSMUST00000187134 615 ntBASIC6.21□□□□□ -1.42
HttP42859 Olfr1391-201ENSMUST00000187509 938 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
HttP42859 Gm28840-205ENSMUST00000189320 615 ntBASIC6.21□□□□□ -1.42
HttP42859 Gm28502-201ENSMUST00000189781 476 ntTSL 2 BASIC6.21□□□□□ -1.42
HttP42859 Gm28835-203ENSMUST00000190062 615 ntBASIC6.21□□□□□ -1.42
HttP42859 Gm44307-201ENSMUST00000204466 764 ntBASIC6.21□□□□□ -1.42
HttP42859 CT010431.1-201ENSMUST00000221249 1080 ntBASIC6.21□□□□□ -1.42
HttP42859 Armc4-201ENSMUST00000081275 3477 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
HttP42859 Myom1-203ENSMUST00000179759 5308 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
HttP42859 Inpp1-201ENSMUST00000027271 5767 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
HttP42859 Polr2a-201ENSMUST00000058470 6740 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
HttP42859 Dgkb-201ENSMUST00000040500 6373 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
HttP42859 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
HttP42859 Cadm2-201ENSMUST00000114292 9564 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
HttP42859 Trps1-207ENSMUST00000184885 3492 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
HttP42859 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
HttP42859 Clrn3-201ENSMUST00000053716 3305 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
HttP42859 Gm37249-201ENSMUST00000195185 2869 ntBASIC6.21□□□□□ -1.42
HttP42859 Ncor1-201ENSMUST00000018645 9037 ntAPPRIS P2 TSL 5 BASIC6.21□□□□□ -1.42
HttP42859 Gm13000-201ENSMUST00000120937 496 ntBASIC6.21□□□□□ -1.42
HttP42859 Gm16589-201ENSMUST00000159522 918 ntBASIC6.21□□□□□ -1.42
HttP42859 Gm2059-201ENSMUST00000212025 287 ntBASIC6.21□□□□□ -1.42
HttP42859 Prl7a1-201ENSMUST00000006659 940 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
HttP42859 Fmo9-201ENSMUST00000027843 3065 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
HttP42859 AU022252-203ENSMUST00000141112 7151 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HttP42859 Zfp263-207ENSMUST00000162207 2452 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HttP42859 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HttP42859 Sulf1-203ENSMUST00000180062 4636 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HttP42859 CT572985.1-201ENSMUST00000220599 4714 ntBASIC6.2□□□□□ -1.42
HttP42859 2700049A03Rik-203ENSMUST00000149564 5763 ntAPPRIS P4 TSL 1 (best) BASIC6.2□□□□□ -1.42
HttP42859 Ctps2-204ENSMUST00000112301 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HttP42859 AC158537.1-201ENSMUST00000224637 1711 ntBASIC6.2□□□□□ -1.42
HttP42859 Hdlbp-204ENSMUST00000186164 3808 ntTSL 5 BASIC6.2□□□□□ -1.42
HttP42859 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
HttP42859 Il18r1-206ENSMUST00000195684 2850 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms