Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm38284-201ENSMUST00000194803 4539 ntBASIC7.26□□□□□ -1.25
Traf1P39428 4921524L21Rik-201ENSMUST00000044829 1480 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Traf1P39428 Fam196b-202ENSMUST00000165963 5371 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
Traf1P39428 Ogdh-201ENSMUST00000003461 4127 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Traf1P39428 9230009I02Rik-201ENSMUST00000101255 1148 ntTSL 2 BASIC7.26□□□□□ -1.25
Traf1P39428 Igkv4-79-201ENSMUST00000103342 358 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Traf1P39428 Gm13207-201ENSMUST00000119862 773 ntBASIC7.26□□□□□ -1.25
Traf1P39428 Gm14603-201ENSMUST00000121275 448 ntBASIC7.26□□□□□ -1.25
Traf1P39428 Gm14216-201ENSMUST00000136046 409 ntTSL 3 BASIC7.26□□□□□ -1.25
Traf1P39428 Gm24687-201ENSMUST00000157758 241 ntBASIC7.26□□□□□ -1.25
Traf1P39428 Ms4a2-202ENSMUST00000164792 1010 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Traf1P39428 1110032A03Rik-209ENSMUST00000177546 647 ntTSL 3 BASIC7.26□□□□□ -1.25
Traf1P39428 Gm5624-202ENSMUST00000178184 492 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
Traf1P39428 AF067063-201ENSMUST00000179455 590 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Traf1P39428 Mir6367-201ENSMUST00000183385 102 ntBASIC7.26□□□□□ -1.25
Traf1P39428 1110008L16Rik-203ENSMUST00000183654 943 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Traf1P39428 Gm28482-201ENSMUST00000189350 452 ntTSL 5 BASIC7.26□□□□□ -1.25
Traf1P39428 Gm28269-201ENSMUST00000189511 559 ntAPPRIS P1 TSL 3 BASIC7.26□□□□□ -1.25
Traf1P39428 Gm28777-201ENSMUST00000191402 535 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Traf1P39428 Gm37573-201ENSMUST00000193993 931 ntTSL 5 BASIC7.26□□□□□ -1.25
Traf1P39428 Gm17824-201ENSMUST00000197690 805 ntBASIC7.26□□□□□ -1.25
Traf1P39428 4921513I08Rik-201ENSMUST00000206993 866 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Traf1P39428 Gm39129-201ENSMUST00000207553 806 ntTSL 5 BASIC7.26□□□□□ -1.25
Traf1P39428 Gm7499-201ENSMUST00000210423 813 ntBASIC7.26□□□□□ -1.25
Traf1P39428 Gm45246-201ENSMUST00000210820 367 ntBASIC7.26□□□□□ -1.25
Traf1P39428 Gm45473-201ENSMUST00000211452 616 ntBASIC7.26□□□□□ -1.25
Traf1P39428 1190001M18Rik-201ENSMUST00000215937 1270 ntBASIC7.26□□□□□ -1.25
Traf1P39428 A330049N07Rik-202ENSMUST00000219920 587 ntTSL 5 BASIC7.26□□□□□ -1.25
Traf1P39428 AC167222.2-201ENSMUST00000220014 295 ntBASIC7.26□□□□□ -1.25
Traf1P39428 CT009515.3-201ENSMUST00000226509 671 ntBASIC7.26□□□□□ -1.25
Traf1P39428 1700007K09Rik-201ENSMUST00000033146 360 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
Traf1P39428 Psd3-214ENSMUST00000212960 4562 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
Traf1P39428 Pcsk1-201ENSMUST00000022075 5040 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Traf1P39428 Olfr118-202ENSMUST00000215811 1742 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
Traf1P39428 Cyp2j8-201ENSMUST00000124729 1512 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
Traf1P39428 Tmprss11f-201ENSMUST00000116553 3605 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Traf1P39428 Son-205ENSMUST00000122302 2449 ntTSL 5 BASIC7.26□□□□□ -1.25
Traf1P39428 4930554C24Rik-203ENSMUST00000216802 1346 ntTSL 5 BASIC7.26□□□□□ -1.25
Traf1P39428 Clec2i-203ENSMUST00000159866 2330 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
Traf1P39428 Olfr286-201ENSMUST00000073612 3821 ntAPPRIS P1 TSL 3 BASIC7.25□□□□□ -1.25
Traf1P39428 Gla-201ENSMUST00000033621 3172 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Traf1P39428 Gm40649-201ENSMUST00000219795 1457 ntTSL 5 BASIC7.25□□□□□ -1.25
Traf1P39428 Vmn2r5-202ENSMUST00000177184 2736 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
Traf1P39428 Gm17056-201ENSMUST00000164804 2299 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Traf1P39428 9530026P05Rik-202ENSMUST00000181145 2968 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Traf1P39428 Gm43864-201ENSMUST00000204452 4028 ntBASIC7.25□□□□□ -1.25
Traf1P39428 Dclre1c-204ENSMUST00000115066 3828 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Traf1P39428 Bloc1s6os-201ENSMUST00000150154 696 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Traf1P39428 Gm16112-201ENSMUST00000159075 382 ntBASIC7.25□□□□□ -1.25
Traf1P39428 Gm8837-201ENSMUST00000161037 1107 ntBASIC7.25□□□□□ -1.25
Traf1P39428 1700025B11Rik-201ENSMUST00000190233 553 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Traf1P39428 Gm29072-201ENSMUST00000191149 678 ntBASIC7.25□□□□□ -1.25
Traf1P39428 Gm38217-201ENSMUST00000194358 910 ntBASIC7.25□□□□□ -1.25
Traf1P39428 Gm4332-201ENSMUST00000196114 346 ntBASIC7.25□□□□□ -1.25
Traf1P39428 Gm42205-201ENSMUST00000199244 804 ntTSL 3 BASIC7.25□□□□□ -1.25
Traf1P39428 Gm44075-201ENSMUST00000204208 216 ntBASIC7.25□□□□□ -1.25
Traf1P39428 Gm44020-201ENSMUST00000204618 664 ntTSL 3 BASIC7.25□□□□□ -1.25
Traf1P39428 Olfr163-ps1-201ENSMUST00000205891 940 ntBASIC7.25□□□□□ -1.25
Traf1P39428 Gm2225-201ENSMUST00000209570 377 ntBASIC7.25□□□□□ -1.25
Traf1P39428 AC156801.1-201ENSMUST00000216158 493 ntTSL 5 BASIC7.25□□□□□ -1.25
Traf1P39428 Olfr643-202ENSMUST00000217217 945 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
Traf1P39428 CAAA01125382.4-201ENSMUST00000217222 774 ntBASIC7.25□□□□□ -1.25
Traf1P39428 AC159297.1-201ENSMUST00000218689 290 ntBASIC7.25□□□□□ -1.25
Traf1P39428 Gm40653-202ENSMUST00000222122 1155 ntTSL 5 BASIC7.25□□□□□ -1.25
Traf1P39428 Elk3-205ENSMUST00000223340 750 ntTSL 5 BASIC7.25□□□□□ -1.25
Traf1P39428 Vmn1r38-203ENSMUST00000227694 909 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
Traf1P39428 AC116319.2-201ENSMUST00000228159 984 ntBASIC7.25□□□□□ -1.25
Traf1P39428 Ctag2-201ENSMUST00000033524 854 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Traf1P39428 Gm9788-201ENSMUST00000057038 906 ntBASIC7.25□□□□□ -1.25
Traf1P39428 Olfr1447-201ENSMUST00000071484 1113 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
Traf1P39428 Azin1-201ENSMUST00000065308 4871 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Traf1P39428 1110059G10Rik-201ENSMUST00000035154 3361 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Traf1P39428 Gm40518-202ENSMUST00000214538 4080 ntTSL 5 BASIC7.25□□□□□ -1.25
Traf1P39428 Neto2-203ENSMUST00000209479 4936 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Traf1P39428 Cyld-206ENSMUST00000209559 4476 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
Traf1P39428 Gm42705-201ENSMUST00000200176 2465 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Traf1P39428 Olfr1079-202ENSMUST00000111582 2141 ntAPPRIS ALT2 TSL 3 BASIC7.25□□□□□ -1.25
Traf1P39428 Impact-201ENSMUST00000025290 3432 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Traf1P39428 Prox1-202ENSMUST00000175916 7913 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Traf1P39428 Gm156-202ENSMUST00000118532 2000 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Traf1P39428 Olfr350-202ENSMUST00000214457 2022 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
Traf1P39428 Gm40987-202ENSMUST00000221856 1588 ntTSL 5 BASIC7.25□□□□□ -1.25
Traf1P39428 Elavl2-209ENSMUST00000107124 4127 ntAPPRIS ALT1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Traf1P39428 Ino80d-201ENSMUST00000097718 13675 ntTSL 5 BASIC7.24□□□□□ -1.25
Traf1P39428 Gm38124-201ENSMUST00000191710 2581 ntBASIC7.24□□□□□ -1.25
Traf1P39428 Tbx22-204ENSMUST00000168403 1715 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Traf1P39428 Vmn1r218-205ENSMUST00000227741 9624 ntAPPRIS ALT2 BASIC7.24□□□□□ -1.25
Traf1P39428 Gm45554-203ENSMUST00000211410 2137 ntTSL 5 BASIC7.24□□□□□ -1.25
Traf1P39428 Il1b-201ENSMUST00000028881 1356 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Traf1P39428 Wdr66-206ENSMUST00000163092 4009 ntTSL 5 BASIC7.24□□□□□ -1.25
Traf1P39428 Dock2-203ENSMUST00000101365 3785 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Traf1P39428 Traj17-201ENSMUST00000103724 63 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Traf1P39428 Gm15332-201ENSMUST00000118386 357 ntBASIC7.24□□□□□ -1.25
Traf1P39428 Gm15781-201ENSMUST00000120216 323 ntBASIC7.24□□□□□ -1.25
Traf1P39428 Gm16095-201ENSMUST00000128235 253 ntTSL 5 BASIC7.24□□□□□ -1.25
Traf1P39428 Mcpt2-201ENSMUST00000015576 1061 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Traf1P39428 Serpina3d-ps-201ENSMUST00000163110 1272 ntBASIC7.24□□□□□ -1.25
Traf1P39428 1700108F19Rik-203ENSMUST00000188798 619 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Traf1P39428 1700108F19Rik-206ENSMUST00000191266 857 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Traf1P39428 Gm37430-201ENSMUST00000193039 196 ntBASIC7.24□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 69.2 ms