Protein–RNA interactions for Protein: W4VSN7

Gm3550, 60S ribosomal protein L29, mousemouse

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3550W4VSN7 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Gm3550W4VSN7 Sp3os-203ENSMUST00000137941 628 ntTSL 2 BASIC5.16□□□□□ -1.58
Gm3550W4VSN7 Gm15503-201ENSMUST00000141541 449 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Gm3550W4VSN7 Gm6264-201ENSMUST00000160802 624 ntBASIC5.16□□□□□ -1.58
Gm3550W4VSN7 Gm16297-201ENSMUST00000161466 459 ntBASIC5.16□□□□□ -1.58
Gm3550W4VSN7 Obox1-202ENSMUST00000172463 783 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
Gm3550W4VSN7 Gm20685-201ENSMUST00000176654 489 ntTSL 3 BASIC5.16□□□□□ -1.58
Gm3550W4VSN7 Gm21560-202ENSMUST00000177670 618 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
Gm3550W4VSN7 Gm3269-202ENSMUST00000178137 618 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
Gm3550W4VSN7 1600029O15Rik-201ENSMUST00000178259 517 ntBASIC5.16□□□□□ -1.58
Gm3550W4VSN7 Gm3099-202ENSMUST00000178274 618 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
Gm3550W4VSN7 Gm3642-202ENSMUST00000179296 618 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
Gm3550W4VSN7 Gm3594-203ENSMUST00000179747 618 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
Gm3550W4VSN7 Gm6526-202ENSMUST00000179860 591 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
Gm3550W4VSN7 9530026P05Rik-202ENSMUST00000181145 2968 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Gm3550W4VSN7 Gm26537-201ENSMUST00000181474 652 ntTSL 3 BASIC5.16□□□□□ -1.58
Gm3550W4VSN7 Mir7685-201ENSMUST00000183555 62 ntBASIC5.16□□□□□ -1.58
Gm3550W4VSN7 Vmn1r189-201ENSMUST00000186062 1137 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Gm3550W4VSN7 Cd68-201ENSMUST00000018918 1230 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Gm3550W4VSN7 1700034J04Rik-201ENSMUST00000192736 750 ntBASIC5.16□□□□□ -1.58
Gm3550W4VSN7 Gm37758-201ENSMUST00000194275 629 ntBASIC5.16□□□□□ -1.58
Gm3550W4VSN7 Gm37838-201ENSMUST00000194464 312 ntBASIC5.16□□□□□ -1.58
Gm3550W4VSN7 Gm37871-201ENSMUST00000194973 688 ntBASIC5.16□□□□□ -1.58
Gm3550W4VSN7 1110003F10Rik-201ENSMUST00000199441 767 ntBASIC5.16□□□□□ -1.58
Gm3550W4VSN7 4930480C01Rik-201ENSMUST00000200913 901 ntBASIC5.16□□□□□ -1.58
Gm3550W4VSN7 Gm45602-202ENSMUST00000211703 1036 ntTSL 5 BASIC5.16□□□□□ -1.58
Gm3550W4VSN7 Tecr-214ENSMUST00000212990 648 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Gm3550W4VSN7 AC124510.2-201ENSMUST00000221958 683 ntBASIC5.16□□□□□ -1.58
Gm3550W4VSN7 Vmn1r50-201ENSMUST00000081706 933 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Gm3550W4VSN7 Gm22300-201ENSMUST00000082661 126 ntBASIC5.16□□□□□ -1.58
Gm3550W4VSN7 Mir194-1-201ENSMUST00000083647 67 ntBASIC5.16□□□□□ -1.58
Gm3550W4VSN7 Spef2-204ENSMUST00000160236 5313 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
Gm3550W4VSN7 Homer1-202ENSMUST00000079086 4287 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Gm3550W4VSN7 Zfp867-201ENSMUST00000057799 3412 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Gm3550W4VSN7 Ddx58-201ENSMUST00000037907 3874 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Gm3550W4VSN7 A930006L05Rik-201ENSMUST00000186821 2814 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Gm3550W4VSN7 Fcgr2b-201ENSMUST00000027966 3544 ntAPPRIS P4 TSL 1 (best) BASIC5.16□□□□□ -1.58
Gm3550W4VSN7 Gm43788-201ENSMUST00000201539 2417 ntBASIC5.16□□□□□ -1.58
Gm3550W4VSN7 AC134329.1-201ENSMUST00000217956 1770 ntTSL 5 BASIC5.16□□□□□ -1.58
Gm3550W4VSN7 Gm45548-201ENSMUST00000210076 3167 ntBASIC5.16□□□□□ -1.58
Gm3550W4VSN7 Fbxo3-202ENSMUST00000102565 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
Gm3550W4VSN7 Neb-201ENSMUST00000028320 10298 ntTSL 5 BASIC5.15□□□□□ -1.58
Gm3550W4VSN7 Tti1-202ENSMUST00000109522 3765 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Gm3550W4VSN7 Gm38085-201ENSMUST00000195785 3062 ntBASIC5.15□□□□□ -1.58
Gm3550W4VSN7 Gm14886-201ENSMUST00000117208 2629 ntBASIC5.15□□□□□ -1.58
Gm3550W4VSN7 Gm5891-202ENSMUST00000186212 2495 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Gm3550W4VSN7 Gm10662-202ENSMUST00000186928 2495 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Gm3550W4VSN7 C230099D08Rik-201ENSMUST00000215772 2727 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
Gm3550W4VSN7 Gm14098-201ENSMUST00000119295 623 ntBASIC5.15□□□□□ -1.59
Gm3550W4VSN7 Gm12929-201ENSMUST00000122406 370 ntBASIC5.15□□□□□ -1.59
Gm3550W4VSN7 D830026I12Rik-201ENSMUST00000124434 935 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Gm3550W4VSN7 Fam229b-202ENSMUST00000124941 721 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Gm3550W4VSN7 Gm15551-201ENSMUST00000132762 535 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Gm3550W4VSN7 AI646519-201ENSMUST00000140987 351 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Gm3550W4VSN7 Lrrc75aos1-201ENSMUST00000142492 779 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Gm3550W4VSN7 Gm23553-201ENSMUST00000157817 295 ntBASIC5.15□□□□□ -1.59
Gm3550W4VSN7 Gm26211-201ENSMUST00000158578 129 ntBASIC5.15□□□□□ -1.59
Gm3550W4VSN7 Vmn1r176-201ENSMUST00000171073 915 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Gm3550W4VSN7 Rps16-ps3-201ENSMUST00000179126 441 ntBASIC5.15□□□□□ -1.59
Gm3550W4VSN7 B230110C06Rik-202ENSMUST00000181936 938 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Gm3550W4VSN7 Mir7058-201ENSMUST00000184637 75 ntBASIC5.15□□□□□ -1.59
Gm3550W4VSN7 Gm18700-201ENSMUST00000185791 553 ntBASIC5.15□□□□□ -1.59
Gm3550W4VSN7 Gm28156-201ENSMUST00000187880 1136 ntTSL 5 BASIC5.15□□□□□ -1.59
Gm3550W4VSN7 Gm29206-201ENSMUST00000189321 827 ntTSL 5 BASIC5.15□□□□□ -1.59
Gm3550W4VSN7 Gm17934-201ENSMUST00000192818 422 ntBASIC5.15□□□□□ -1.59
Gm3550W4VSN7 A330069K06Rik-201ENSMUST00000194077 917 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Gm3550W4VSN7 Gm22711-202ENSMUST00000197029 135 ntBASIC5.15□□□□□ -1.59
Gm3550W4VSN7 Tshb-205ENSMUST00000197322 476 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Gm3550W4VSN7 Gm31897-202ENSMUST00000206231 604 ntTSL 3 BASIC5.15□□□□□ -1.59
Gm3550W4VSN7 Gm4265-201ENSMUST00000206701 674 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Gm3550W4VSN7 Gm45156-201ENSMUST00000207255 439 ntBASIC5.15□□□□□ -1.59
Gm3550W4VSN7 Gm7351-201ENSMUST00000210745 580 ntBASIC5.15□□□□□ -1.59
Gm3550W4VSN7 Asf1a-204ENSMUST00000219271 725 ntTSL 5 BASIC5.15□□□□□ -1.59
Gm3550W4VSN7 Gm3785-201ENSMUST00000221000 202 ntBASIC5.15□□□□□ -1.59
Gm3550W4VSN7 CT009713.1-201ENSMUST00000224828 853 ntBASIC5.15□□□□□ -1.59
Gm3550W4VSN7 CT030645.3-201ENSMUST00000225483 1022 ntBASIC5.15□□□□□ -1.59
Gm3550W4VSN7 AC154527.1-201ENSMUST00000225809 242 ntBASIC5.15□□□□□ -1.59
Gm3550W4VSN7 AC129537.1-201ENSMUST00000226596 1228 ntBASIC5.15□□□□□ -1.59
Gm3550W4VSN7 Mir7b-201ENSMUST00000083557 111 ntBASIC5.15□□□□□ -1.59
Gm3550W4VSN7 1700109H08Rik-201ENSMUST00000008451 773 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Gm3550W4VSN7 Gm38142-201ENSMUST00000194093 3555 ntBASIC5.15□□□□□ -1.59
Gm3550W4VSN7 4933409F18Rik-202ENSMUST00000222026 1584 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Gm3550W4VSN7 CT009757.5-201ENSMUST00000221858 3425 ntBASIC5.15□□□□□ -1.59
Gm3550W4VSN7 Zbed6-201ENSMUST00000190574 5007 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Gm3550W4VSN7 Mcoln3-201ENSMUST00000039450 2991 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Gm3550W4VSN7 Il7r-201ENSMUST00000003981 3540 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.59
Gm3550W4VSN7 Nlrp1b-201ENSMUST00000094046 3525 ntAPPRIS P3 TSL 5 BASIC5.15□□□□□ -1.59
Gm3550W4VSN7 Gm44043-201ENSMUST00000203426 3253 ntBASIC5.15□□□□□ -1.59
Gm3550W4VSN7 Olfr373-202ENSMUST00000213940 4145 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Gm3550W4VSN7 Il1b-201ENSMUST00000028881 1356 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Gm3550W4VSN7 Gm37087-201ENSMUST00000192966 3309 ntBASIC5.15□□□□□ -1.59
Gm3550W4VSN7 Gm37752-201ENSMUST00000193494 3309 ntBASIC5.15□□□□□ -1.59
Gm3550W4VSN7 Naip2-201ENSMUST00000067975 4709 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.59
Gm3550W4VSN7 Gm2245-201ENSMUST00000160698 3376 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Gm3550W4VSN7 Slc35a5-201ENSMUST00000023344 4233 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Gm3550W4VSN7 Il13ra2-201ENSMUST00000033646 2281 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Gm3550W4VSN7 Vmn2r22-201ENSMUST00000170808 2562 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Gm3550W4VSN7 5830444B04Rik-204ENSMUST00000166921 2870 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Gm3550W4VSN7 Gm43180-201ENSMUST00000197541 2886 ntBASIC5.14□□□□□ -1.59
Gm3550W4VSN7 Pkn2-210ENSMUST00000174422 2904 ntTSL 5 BASIC5.14□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms