Protein–RNA interactions for Protein: Q9QZS2

Rnf4, E3 ubiquitin-protein ligase RNF4, mousemouse

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4Q9QZS2 Gm22781-201ENSMUST00000104083 137 ntBASIC6.2□□□□□ -1.42
Rnf4Q9QZS2 Olfr1196-201ENSMUST00000104892 945 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Rnf4Q9QZS2 Rpl31-ps10-201ENSMUST00000116034 378 ntBASIC6.2□□□□□ -1.42
Rnf4Q9QZS2 Gm12653-201ENSMUST00000117778 561 ntBASIC6.2□□□□□ -1.42
Rnf4Q9QZS2 Gm13311-201ENSMUST00000117863 379 ntBASIC6.2□□□□□ -1.42
Rnf4Q9QZS2 Rpl31-ps11-201ENSMUST00000119898 377 ntBASIC6.2□□□□□ -1.42
Rnf4Q9QZS2 Rpl31-ps12-201ENSMUST00000119957 375 ntBASIC6.2□□□□□ -1.42
Rnf4Q9QZS2 4930586N03Rik-201ENSMUST00000122940 881 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Rnf4Q9QZS2 Platr28-201ENSMUST00000133824 1294 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Rnf4Q9QZS2 Gm15401-203ENSMUST00000156497 378 ntTSL 3 BASIC6.2□□□□□ -1.42
Rnf4Q9QZS2 Gm24363-201ENSMUST00000158440 311 ntBASIC6.2□□□□□ -1.42
Rnf4Q9QZS2 Gm16132-201ENSMUST00000159296 598 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Rnf4Q9QZS2 Mup8-202ENSMUST00000163931 986 ntAPPRIS P3 TSL 5 BASIC6.2□□□□□ -1.42
Rnf4Q9QZS2 Svs6-201ENSMUST00000017144 535 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Rnf4Q9QZS2 Krtap11-1-201ENSMUST00000171542 1008 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Rnf4Q9QZS2 Gm4141-201ENSMUST00000174364 921 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Rnf4Q9QZS2 Gm4201-201ENSMUST00000174775 921 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Rnf4Q9QZS2 Odaph-201ENSMUST00000178614 760 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Rnf4Q9QZS2 Gm17174-201ENSMUST00000178962 671 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Rnf4Q9QZS2 Rpl31-ps8-201ENSMUST00000181935 378 ntBASIC6.2□□□□□ -1.42
Rnf4Q9QZS2 Rpl31-206ENSMUST00000195123 356 ntTSL 3 BASIC6.2□□□□□ -1.42
Rnf4Q9QZS2 Fxyd4-207ENSMUST00000204214 550 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Rnf4Q9QZS2 Gm44199-201ENSMUST00000205219 739 ntTSL 3 BASIC6.2□□□□□ -1.42
Rnf4Q9QZS2 Olfr726-202ENSMUST00000206834 1256 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
Rnf4Q9QZS2 Tecr-214ENSMUST00000212990 648 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Rnf4Q9QZS2 Gm31013-201ENSMUST00000213576 715 ntTSL 3 BASIC6.2□□□□□ -1.42
Rnf4Q9QZS2 AC102582.2-201ENSMUST00000214658 1137 ntTSL 5 BASIC6.2□□□□□ -1.42
Rnf4Q9QZS2 AC116589.2-201ENSMUST00000220469 478 ntTSL 3 BASIC6.2□□□□□ -1.42
Rnf4Q9QZS2 Gm9321-201ENSMUST00000221179 778 ntBASIC6.2□□□□□ -1.42
Rnf4Q9QZS2 Rps27rt-201ENSMUST00000053150 374 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Rnf4Q9QZS2 Rpl31-ps4-201ENSMUST00000079114 390 ntBASIC6.2□□□□□ -1.42
Rnf4Q9QZS2 Gm23054-201ENSMUST00000082804 162 ntBASIC6.2□□□□□ -1.42
Rnf4Q9QZS2 Rpl31-ps9-201ENSMUST00000086596 378 ntBASIC6.2□□□□□ -1.42
Rnf4Q9QZS2 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Rnf4Q9QZS2 Rnase6-201ENSMUST00000095923 1072 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Rnf4Q9QZS2 Olfr1197-201ENSMUST00000099815 945 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Rnf4Q9QZS2 Gm20362-201ENSMUST00000204808 2072 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Rnf4Q9QZS2 Lmbrd2-201ENSMUST00000090380 3210 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Rnf4Q9QZS2 Nlgn1-201ENSMUST00000075054 4359 ntAPPRIS P3 TSL 5 BASIC6.2□□□□□ -1.42
Rnf4Q9QZS2 AC124569.3-201ENSMUST00000224860 1621 ntBASIC6.2□□□□□ -1.42
Rnf4Q9QZS2 Gm44229-201ENSMUST00000203211 2487 ntBASIC6.2□□□□□ -1.42
Rnf4Q9QZS2 Cd200r3-206ENSMUST00000114622 1339 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Rnf4Q9QZS2 F930017D23Rik-201ENSMUST00000099888 1836 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Rnf4Q9QZS2 Prom1-207ENSMUST00000177946 3534 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Rnf4Q9QZS2 Gm26789-201ENSMUST00000181342 2502 ntTSL 5 BASIC6.2□□□□□ -1.42
Rnf4Q9QZS2 Nt5c3-202ENSMUST00000101367 1519 ntAPPRIS ALT1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Rnf4Q9QZS2 AC158981.2-201ENSMUST00000227565 1537 ntBASIC6.2□□□□□ -1.42
Rnf4Q9QZS2 Vmn1r219-202ENSMUST00000226845 5979 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Rnf4Q9QZS2 Vmn1r219-205ENSMUST00000228666 5993 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Rnf4Q9QZS2 9330175M20Rik-201ENSMUST00000189867 2552 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Rnf4Q9QZS2 Ascc3-206ENSMUST00000219226 1357 ntTSL 5 BASIC6.19□□□□□ -1.42
Rnf4Q9QZS2 Rfx3-202ENSMUST00000165566 9146 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Rnf4Q9QZS2 Stxbp5-201ENSMUST00000038213 8825 ntAPPRIS ALT1 TSL 5 BASIC6.19□□□□□ -1.42
Rnf4Q9QZS2 Rapgef6-204ENSMUST00000108894 3475 ntTSL 5 BASIC6.19□□□□□ -1.42
Rnf4Q9QZS2 Slc9a9-201ENSMUST00000033463 3468 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Rnf4Q9QZS2 Dusp16-204ENSMUST00000149776 3305 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Rnf4Q9QZS2 Gm29438-201ENSMUST00000191298 2613 ntBASIC6.19□□□□□ -1.42
Rnf4Q9QZS2 Gm43627-201ENSMUST00000197119 2299 ntBASIC6.19□□□□□ -1.42
Rnf4Q9QZS2 Ncoa7-212ENSMUST00000217644 2256 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Rnf4Q9QZS2 Celf2-201ENSMUST00000002176 7718 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
Rnf4Q9QZS2 Dnm3os-201ENSMUST00000139662 7928 ntBASIC6.19□□□□□ -1.42
Rnf4Q9QZS2 Gm4841-201ENSMUST00000090260 2838 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
Rnf4Q9QZS2 Sgip1-202ENSMUST00000072481 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Rnf4Q9QZS2 Unc13c-201ENSMUST00000075245 6633 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Rnf4Q9QZS2 Matr3-ps2-201ENSMUST00000160839 1996 ntBASIC6.19□□□□□ -1.42
Rnf4Q9QZS2 A930017M01Rik-201ENSMUST00000081361 2884 ntBASIC6.19□□□□□ -1.42
Rnf4Q9QZS2 AL591843.1-201ENSMUST00000223686 3082 ntBASIC6.19□□□□□ -1.42
Rnf4Q9QZS2 Igkv4-59-201ENSMUST00000103354 368 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Rnf4Q9QZS2 Gm23294-201ENSMUST00000104150 164 ntBASIC6.19□□□□□ -1.42
Rnf4Q9QZS2 Gm24888-201ENSMUST00000104387 130 ntBASIC6.19□□□□□ -1.42
Rnf4Q9QZS2 Gm14326-201ENSMUST00000108928 767 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Rnf4Q9QZS2 Gm21103-201ENSMUST00000112737 984 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Rnf4Q9QZS2 Ap3s1-ps1-201ENSMUST00000117113 579 ntBASIC6.19□□□□□ -1.42
Rnf4Q9QZS2 Zfp389-201ENSMUST00000118425 675 ntBASIC6.19□□□□□ -1.42
Rnf4Q9QZS2 Gm15840-201ENSMUST00000122099 943 ntBASIC6.19□□□□□ -1.42
Rnf4Q9QZS2 Gm4764-201ENSMUST00000130207 1233 ntBASIC6.19□□□□□ -1.42
Rnf4Q9QZS2 4930517O19Rik-201ENSMUST00000140320 603 ntTSL 5 BASIC6.19□□□□□ -1.42
Rnf4Q9QZS2 1700073E17Rik-203ENSMUST00000148424 741 ntBASIC6.19□□□□□ -1.42
Rnf4Q9QZS2 Gm11335-201ENSMUST00000148743 1080 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Rnf4Q9QZS2 Gm3047-201ENSMUST00000164069 822 ntAPPRIS P5 TSL 5 BASIC6.19□□□□□ -1.42
Rnf4Q9QZS2 Gm3029-201ENSMUST00000168306 984 ntAPPRIS P5 TSL 5 BASIC6.19□□□□□ -1.42
Rnf4Q9QZS2 Gm17044-201ENSMUST00000168549 828 ntBASIC6.19□□□□□ -1.42
Rnf4Q9QZS2 Csnk2b-209ENSMUST00000174779 632 ntTSL 2 BASIC6.19□□□□□ -1.42
Rnf4Q9QZS2 Vmn1r-ps141-201ENSMUST00000176293 753 ntBASIC6.19□□□□□ -1.42
Rnf4Q9QZS2 Gm20643-201ENSMUST00000177284 322 ntTSL 3 BASIC6.19□□□□□ -1.42
Rnf4Q9QZS2 Ap3s1-ps2-201ENSMUST00000178107 579 ntBASIC6.19□□□□□ -1.42
Rnf4Q9QZS2 Gm27602-201ENSMUST00000183861 111 ntBASIC6.19□□□□□ -1.42
Rnf4Q9QZS2 Mir6908-201ENSMUST00000184056 63 ntBASIC6.19□□□□□ -1.42
Rnf4Q9QZS2 Gm29048-201ENSMUST00000185342 615 ntBASIC6.19□□□□□ -1.42
Rnf4Q9QZS2 Gm29403-201ENSMUST00000185491 615 ntBASIC6.19□□□□□ -1.42
Rnf4Q9QZS2 Gm28234-201ENSMUST00000185657 615 ntBASIC6.19□□□□□ -1.42
Rnf4Q9QZS2 Gm28248-201ENSMUST00000186093 615 ntBASIC6.19□□□□□ -1.42
Rnf4Q9QZS2 Gm29633-202ENSMUST00000186217 615 ntBASIC6.19□□□□□ -1.42
Rnf4Q9QZS2 Gm28829-201ENSMUST00000186231 615 ntBASIC6.19□□□□□ -1.42
Rnf4Q9QZS2 Gm28261-201ENSMUST00000186417 615 ntBASIC6.19□□□□□ -1.42
Rnf4Q9QZS2 Gm28815-201ENSMUST00000186751 615 ntBASIC6.19□□□□□ -1.42
Rnf4Q9QZS2 Gm28608-201ENSMUST00000186860 615 ntBASIC6.19□□□□□ -1.42
Rnf4Q9QZS2 Gm28122-201ENSMUST00000187088 615 ntBASIC6.19□□□□□ -1.42
Rnf4Q9QZS2 Gm28420-201ENSMUST00000187340 615 ntBASIC6.19□□□□□ -1.42
Rnf4Q9QZS2 Gm28106-201ENSMUST00000187640 615 ntBASIC6.19□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms