Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Slc17a4-201ENSMUST00000021769 1604 ntAPPRIS P2 TSL 5 BASIC5.78□□□□□ -1.48
Cdc40Q9DC48 Gm43611-201ENSMUST00000196656 4352 ntBASIC5.78□□□□□ -1.48
Cdc40Q9DC48 Malrd1-201ENSMUST00000146205 6738 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Cdc40Q9DC48 Ncald-202ENSMUST00000116445 858 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
Cdc40Q9DC48 Gm12618-201ENSMUST00000121754 483 ntBASIC5.78□□□□□ -1.48
Cdc40Q9DC48 Gm13024-201ENSMUST00000121756 718 ntBASIC5.78□□□□□ -1.48
Cdc40Q9DC48 Fthl17-ps3-201ENSMUST00000126259 513 ntBASIC5.78□□□□□ -1.48
Cdc40Q9DC48 AA645442-201ENSMUST00000156020 285 ntTSL 2 BASIC5.78□□□□□ -1.48
Cdc40Q9DC48 Gm15401-203ENSMUST00000156497 378 ntTSL 3 BASIC5.78□□□□□ -1.48
Cdc40Q9DC48 Gm26486-201ENSMUST00000158021 110 ntBASIC5.78□□□□□ -1.48
Cdc40Q9DC48 Gm24343-201ENSMUST00000158708 111 ntBASIC5.78□□□□□ -1.48
Cdc40Q9DC48 Ptpn4-204ENSMUST00000163621 431 ntTSL 3 BASIC5.78□□□□□ -1.48
Cdc40Q9DC48 Gm17137-202ENSMUST00000165729 957 ntBASIC5.78□□□□□ -1.48
Cdc40Q9DC48 Gm5885-201ENSMUST00000178578 648 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Cdc40Q9DC48 Gm27853-201ENSMUST00000184176 250 ntBASIC5.78□□□□□ -1.48
Cdc40Q9DC48 Gm27210-201ENSMUST00000184263 402 ntBASIC5.78□□□□□ -1.48
Cdc40Q9DC48 Mir7072-201ENSMUST00000184542 60 ntBASIC5.78□□□□□ -1.48
Cdc40Q9DC48 9430002A10Rik-202ENSMUST00000185395 475 ntBASIC5.78□□□□□ -1.48
Cdc40Q9DC48 Gm18700-201ENSMUST00000185791 553 ntBASIC5.78□□□□□ -1.48
Cdc40Q9DC48 Ighv5-21-201ENSMUST00000191935 295 ntBASIC5.78□□□□□ -1.48
Cdc40Q9DC48 Gm38097-201ENSMUST00000192936 439 ntBASIC5.78□□□□□ -1.48
Cdc40Q9DC48 Gm37430-201ENSMUST00000193039 196 ntBASIC5.78□□□□□ -1.48
Cdc40Q9DC48 Gm37966-201ENSMUST00000193122 326 ntBASIC5.78□□□□□ -1.48
Cdc40Q9DC48 Ighv1-10-201ENSMUST00000194372 355 ntBASIC5.78□□□□□ -1.48
Cdc40Q9DC48 Slamf7-205ENSMUST00000194791 909 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Cdc40Q9DC48 Gm3544-201ENSMUST00000196129 305 ntBASIC5.78□□□□□ -1.48
Cdc40Q9DC48 Gm3279-201ENSMUST00000203099 1092 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Cdc40Q9DC48 Gm18009-201ENSMUST00000203239 1016 ntBASIC5.78□□□□□ -1.48
Cdc40Q9DC48 Gm44105-201ENSMUST00000204401 308 ntTSL 5 BASIC5.78□□□□□ -1.48
Cdc40Q9DC48 Gm44809-201ENSMUST00000208305 993 ntBASIC5.78□□□□□ -1.48
Cdc40Q9DC48 Olfr374-201ENSMUST00000209675 1053 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Cdc40Q9DC48 Gm34853-201ENSMUST00000211662 509 ntTSL 5 BASIC5.78□□□□□ -1.48
Cdc40Q9DC48 Gm34263-202ENSMUST00000214353 303 ntTSL 5 BASIC5.78□□□□□ -1.48
Cdc40Q9DC48 Celf2-201ENSMUST00000002176 7718 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
Cdc40Q9DC48 AC147782.1-201ENSMUST00000219169 475 ntBASIC5.78□□□□□ -1.48
Cdc40Q9DC48 AC151904.3-201ENSMUST00000219266 895 ntBASIC5.78□□□□□ -1.48
Cdc40Q9DC48 4921501I09Rik-201ENSMUST00000220337 384 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Cdc40Q9DC48 Gm9321-201ENSMUST00000221179 778 ntBASIC5.78□□□□□ -1.48
Cdc40Q9DC48 Olfr779-202ENSMUST00000222301 929 ntAPPRIS P5 BASIC5.78□□□□□ -1.48
Cdc40Q9DC48 Vmn1r38-203ENSMUST00000227694 909 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Cdc40Q9DC48 Lgals2-201ENSMUST00000044584 590 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Cdc40Q9DC48 Vmn1r33-202ENSMUST00000227418 2414 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Cdc40Q9DC48 4933431G14Rik-201ENSMUST00000205571 1670 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Cdc40Q9DC48 Gm46199-201ENSMUST00000220373 1693 ntBASIC5.78□□□□□ -1.48
Cdc40Q9DC48 B020004J07Rik-201ENSMUST00000084386 1695 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Cdc40Q9DC48 Slc9a4-201ENSMUST00000027233 3962 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Cdc40Q9DC48 Gm42541-201ENSMUST00000199871 2249 ntBASIC5.78□□□□□ -1.48
Cdc40Q9DC48 Gm12763-201ENSMUST00000151344 1939 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Cdc40Q9DC48 Asap1-205ENSMUST00000175793 4314 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
Cdc40Q9DC48 Ctage5-202ENSMUST00000069430 2869 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Cdc40Q9DC48 Mfap3-203ENSMUST00000108849 4827 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Cdc40Q9DC48 Olfr350-202ENSMUST00000214457 2022 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Cdc40Q9DC48 4933405O20Rik-201ENSMUST00000119710 1341 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Cdc40Q9DC48 Psg20-202ENSMUST00000108482 1871 ntAPPRIS P5 TSL 5 BASIC5.77□□□□□ -1.49
Cdc40Q9DC48 AC154612.1-202ENSMUST00000224806 1725 ntBASIC5.77□□□□□ -1.49
Cdc40Q9DC48 Gm35842-201ENSMUST00000207859 4464 ntTSL 5 BASIC5.77□□□□□ -1.49
Cdc40Q9DC48 Zfp457-201ENSMUST00000049705 2117 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Cdc40Q9DC48 Herc2-202ENSMUST00000164095 15261 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Cdc40Q9DC48 Fam227b-204ENSMUST00000178118 1599 ntAPPRIS P2 TSL 5 BASIC5.77□□□□□ -1.49
Cdc40Q9DC48 Gm37876-201ENSMUST00000194490 1591 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Cdc40Q9DC48 Mug1-201ENSMUST00000032228 4657 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Cdc40Q9DC48 Mef2c-202ENSMUST00000163888 6277 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Cdc40Q9DC48 Errfi1-202ENSMUST00000073600 3036 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Cdc40Q9DC48 9230009I02Rik-201ENSMUST00000101255 1148 ntTSL 2 BASIC5.77□□□□□ -1.49
Cdc40Q9DC48 Igkv4-79-201ENSMUST00000103342 358 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Cdc40Q9DC48 Igkv18-36-201ENSMUST00000103373 344 ntAPPRIS ALT2 BASIC5.77□□□□□ -1.49
Cdc40Q9DC48 Gm24709-201ENSMUST00000104123 132 ntBASIC5.77□□□□□ -1.49
Cdc40Q9DC48 Mup3-203ENSMUST00000107488 984 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Cdc40Q9DC48 Gm15016-201ENSMUST00000117300 720 ntBASIC5.77□□□□□ -1.49
Cdc40Q9DC48 Gm14356-201ENSMUST00000118322 869 ntBASIC5.77□□□□□ -1.49
Cdc40Q9DC48 1700041M05Rik-201ENSMUST00000130055 306 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Cdc40Q9DC48 Gm11292-201ENSMUST00000146121 1153 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Cdc40Q9DC48 Gm16226-201ENSMUST00000159950 760 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Cdc40Q9DC48 Gm22569-201ENSMUST00000175545 124 ntBASIC5.77□□□□□ -1.49
Cdc40Q9DC48 AF067063-201ENSMUST00000179455 590 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Cdc40Q9DC48 Gm10603-203ENSMUST00000184875 508 ntTSL 3 BASIC5.77□□□□□ -1.49
Cdc40Q9DC48 Eif4a2-224ENSMUST00000187168 1238 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Cdc40Q9DC48 Gm37463-201ENSMUST00000193819 796 ntBASIC5.77□□□□□ -1.49
Cdc40Q9DC48 Gm7166-201ENSMUST00000199715 303 ntBASIC5.77□□□□□ -1.49
Cdc40Q9DC48 Klk1b10-ps-201ENSMUST00000205895 783 ntBASIC5.77□□□□□ -1.49
Cdc40Q9DC48 4921513I08Rik-201ENSMUST00000206993 866 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Cdc40Q9DC48 Gm39129-201ENSMUST00000207553 806 ntTSL 5 BASIC5.77□□□□□ -1.49
Cdc40Q9DC48 AC165292.1-201ENSMUST00000215218 620 ntBASIC5.77□□□□□ -1.49
Cdc40Q9DC48 AC122371.2-201ENSMUST00000220583 366 ntBASIC5.77□□□□□ -1.49
Cdc40Q9DC48 AC154250.1-201ENSMUST00000224775 489 ntBASIC5.77□□□□□ -1.49
Cdc40Q9DC48 AC166574.3-201ENSMUST00000226725 367 ntBASIC5.77□□□□□ -1.49
Cdc40Q9DC48 Olfr1441-201ENSMUST00000059033 1088 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Cdc40Q9DC48 Olfr267-201ENSMUST00000059608 944 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Cdc40Q9DC48 Cldn34b3-201ENSMUST00000096389 1077 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Cdc40Q9DC48 Gml2-201ENSMUST00000096399 808 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Cdc40Q9DC48 Gm37186-201ENSMUST00000195629 2861 ntBASIC5.77□□□□□ -1.49
Cdc40Q9DC48 Gm765-201ENSMUST00000164491 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Cdc40Q9DC48 Gm37106-201ENSMUST00000193760 1532 ntBASIC5.77□□□□□ -1.49
Cdc40Q9DC48 Ubtfl1-203ENSMUST00000169398 4430 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Cdc40Q9DC48 Vmn2r16-201ENSMUST00000165180 2553 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Cdc40Q9DC48 Pum2-204ENSMUST00000163569 3560 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
Cdc40Q9DC48 Gm42685-201ENSMUST00000200378 2390 ntBASIC5.77□□□□□ -1.49
Cdc40Q9DC48 4930480E11Rik-201ENSMUST00000035626 1486 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Cdc40Q9DC48 Gm20276-201ENSMUST00000216122 2648 ntBASIC5.77□□□□□ -1.49
Cdc40Q9DC48 Zscan4e-201ENSMUST00000166753 1722 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 80.9 ms