Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Gm3594-201ENSMUST00000169152 997 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
Use1Q9CQ56 Lrrc4-202ENSMUST00000171353 883 ntTSL 3 BASIC5.78□□□□□ -1.48
Use1Q9CQ56 Sbp-205ENSMUST00000183017 700 ntTSL 5 BASIC5.78□□□□□ -1.48
Use1Q9CQ56 Gm10136-201ENSMUST00000183196 435 ntBASIC5.78□□□□□ -1.48
Use1Q9CQ56 Mir8114-201ENSMUST00000183582 111 ntBASIC5.78□□□□□ -1.48
Use1Q9CQ56 Mir6987-201ENSMUST00000184789 73 ntBASIC5.78□□□□□ -1.48
Use1Q9CQ56 Gm29496-201ENSMUST00000189854 693 ntBASIC5.78□□□□□ -1.48
Use1Q9CQ56 1700066C05Rik-201ENSMUST00000191029 407 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Use1Q9CQ56 Gm34816-201ENSMUST00000193363 502 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Use1Q9CQ56 Ighv8-2-201ENSMUST00000195037 359 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Use1Q9CQ56 Gm43241-201ENSMUST00000198375 364 ntTSL 3 BASIC5.78□□□□□ -1.48
Use1Q9CQ56 4930563F08Rik-201ENSMUST00000198640 515 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Use1Q9CQ56 4933401H06Rik-201ENSMUST00000199058 827 ntTSL 3 BASIC5.78□□□□□ -1.48
Use1Q9CQ56 Gm44226-201ENSMUST00000205203 1195 ntTSL 5 BASIC5.78□□□□□ -1.48
Use1Q9CQ56 Gm44836-201ENSMUST00000205869 336 ntTSL 5 BASIC5.78□□□□□ -1.48
Use1Q9CQ56 Gm6009-201ENSMUST00000210848 280 ntBASIC5.78□□□□□ -1.48
Use1Q9CQ56 Gm45602-202ENSMUST00000211703 1036 ntTSL 5 BASIC5.78□□□□□ -1.48
Use1Q9CQ56 Gm46311-201ENSMUST00000217971 203 ntBASIC5.78□□□□□ -1.48
Use1Q9CQ56 Olfr258-ps1-202ENSMUST00000218625 1085 ntTSL 5 BASIC5.78□□□□□ -1.48
Use1Q9CQ56 CT010431.1-201ENSMUST00000221249 1080 ntBASIC5.78□□□□□ -1.48
Use1Q9CQ56 AC154755.1-201ENSMUST00000225244 537 ntBASIC5.78□□□□□ -1.48
Use1Q9CQ56 AC154484.2-201ENSMUST00000228359 818 ntBASIC5.78□□□□□ -1.48
Use1Q9CQ56 AC115735.5-201ENSMUST00000228386 397 ntBASIC5.78□□□□□ -1.48
Use1Q9CQ56 Calcoco2-202ENSMUST00000097162 968 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
Use1Q9CQ56 Zfp974-201ENSMUST00000098639 5158 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Use1Q9CQ56 AC105407.2-201ENSMUST00000223707 3911 ntBASIC5.78□□□□□ -1.48
Use1Q9CQ56 Gm45752-201ENSMUST00000212917 3186 ntTSL 5 BASIC5.78□□□□□ -1.48
Use1Q9CQ56 Dnah6-201ENSMUST00000064948 12652 ntAPPRIS P2 TSL 5 BASIC5.78□□□□□ -1.48
Use1Q9CQ56 Vmn1r9-202ENSMUST00000227399 6778 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Use1Q9CQ56 Fam35a-206ENSMUST00000228626 3100 ntBASIC5.78□□□□□ -1.48
Use1Q9CQ56 Gm14896-201ENSMUST00000121311 1351 ntBASIC5.78□□□□□ -1.48
Use1Q9CQ56 Gm33680-203ENSMUST00000219610 4117 ntTSL 3 BASIC5.78□□□□□ -1.48
Use1Q9CQ56 Catsperg2-201ENSMUST00000061193 3957 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Use1Q9CQ56 Olfr477-202ENSMUST00000214677 2930 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Use1Q9CQ56 Obox3-202ENSMUST00000095217 1603 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.48
Use1Q9CQ56 Olfr693-202ENSMUST00000215541 4015 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.48
Use1Q9CQ56 Akap5-201ENSMUST00000095610 6687 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Use1Q9CQ56 Mnd1-ps-202ENSMUST00000224435 2574 ntBASIC5.77□□□□□ -1.49
Use1Q9CQ56 Zpld1-201ENSMUST00000036412 2589 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Use1Q9CQ56 Vmn1r33-202ENSMUST00000227418 2414 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Use1Q9CQ56 C1d-201ENSMUST00000000594 2981 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Use1Q9CQ56 Fcgr2b-201ENSMUST00000027966 3544 ntAPPRIS P4 TSL 1 (best) BASIC5.77□□□□□ -1.49
Use1Q9CQ56 Tmem74-201ENSMUST00000067469 3528 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Use1Q9CQ56 Ccdc7a-205ENSMUST00000214889 5544 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
Use1Q9CQ56 Dnah3-204ENSMUST00000209154 12265 ntAPPRIS P5 TSL 5 BASIC5.77□□□□□ -1.49
Use1Q9CQ56 Cyp2c40-201ENSMUST00000160476 1803 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Use1Q9CQ56 Igkv8-24-201ENSMUST00000103384 365 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Use1Q9CQ56 Gm25396-201ENSMUST00000103981 133 ntBASIC5.77□□□□□ -1.49
Use1Q9CQ56 Gm25785-201ENSMUST00000104129 125 ntBASIC5.77□□□□□ -1.49
Use1Q9CQ56 Sult2a7-201ENSMUST00000108524 897 ntAPPRIS P2 TSL 5 BASIC5.77□□□□□ -1.49
Use1Q9CQ56 Gm14173-201ENSMUST00000117690 278 ntBASIC5.77□□□□□ -1.49
Use1Q9CQ56 Mup9-202ENSMUST00000118759 909 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
Use1Q9CQ56 Gm4234-201ENSMUST00000119747 714 ntBASIC5.77□□□□□ -1.49
Use1Q9CQ56 Gm11761-201ENSMUST00000121392 445 ntBASIC5.77□□□□□ -1.49
Use1Q9CQ56 Gm12399-201ENSMUST00000121475 446 ntBASIC5.77□□□□□ -1.49
Use1Q9CQ56 Lrrc72-202ENSMUST00000122115 934 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Use1Q9CQ56 Mup9-204ENSMUST00000122381 864 ntAPPRIS P2 TSL 2 BASIC5.77□□□□□ -1.49
Use1Q9CQ56 Gm13982-201ENSMUST00000138372 755 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Use1Q9CQ56 Gm12279-201ENSMUST00000142533 294 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Use1Q9CQ56 Gm15564-201ENSMUST00000144134 545 ntTSL 3 BASIC5.77□□□□□ -1.49
Use1Q9CQ56 Gm15734-201ENSMUST00000163076 1040 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Use1Q9CQ56 1700028B04Rik-201ENSMUST00000186274 555 ntBASIC5.77□□□□□ -1.49
Use1Q9CQ56 Gm28156-201ENSMUST00000187880 1136 ntTSL 5 BASIC5.77□□□□□ -1.49
Use1Q9CQ56 Gm29111-201ENSMUST00000188823 696 ntBASIC5.77□□□□□ -1.49
Use1Q9CQ56 Gm28258-201ENSMUST00000189033 587 ntTSL 3 BASIC5.77□□□□□ -1.49
Use1Q9CQ56 Gm28455-201ENSMUST00000189105 1290 ntBASIC5.77□□□□□ -1.49
Use1Q9CQ56 Gm28584-201ENSMUST00000191489 696 ntBASIC5.77□□□□□ -1.49
Use1Q9CQ56 Gm17934-201ENSMUST00000192818 422 ntBASIC5.77□□□□□ -1.49
Use1Q9CQ56 Gm38138-201ENSMUST00000193274 696 ntBASIC5.77□□□□□ -1.49
Use1Q9CQ56 Gm37758-201ENSMUST00000194275 629 ntBASIC5.77□□□□□ -1.49
Use1Q9CQ56 Gm37991-201ENSMUST00000194297 696 ntBASIC5.77□□□□□ -1.49
Use1Q9CQ56 Gm42865-201ENSMUST00000197981 613 ntTSL 3 BASIC5.77□□□□□ -1.49
Use1Q9CQ56 Gm19088-201ENSMUST00000198800 566 ntBASIC5.77□□□□□ -1.49
Use1Q9CQ56 AC134333.1-201ENSMUST00000204536 944 ntBASIC5.77□□□□□ -1.49
Use1Q9CQ56 Gm34225-201ENSMUST00000205469 443 ntTSL 5 BASIC5.77□□□□□ -1.49
Use1Q9CQ56 Sult2a7-204ENSMUST00000211740 942 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
Use1Q9CQ56 AC108846.2-201ENSMUST00000214925 731 ntTSL 5 BASIC5.77□□□□□ -1.49
Use1Q9CQ56 AC132239.1-201ENSMUST00000223157 773 ntTSL 5 BASIC5.77□□□□□ -1.49
Use1Q9CQ56 AV026068-220ENSMUST00000224153 1147 ntBASIC5.77□□□□□ -1.49
Use1Q9CQ56 Olfr309-201ENSMUST00000055690 927 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Use1Q9CQ56 Cetn1-201ENSMUST00000062769 1247 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Use1Q9CQ56 Mup20-201ENSMUST00000074018 928 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Use1Q9CQ56 Gm22300-201ENSMUST00000082661 126 ntBASIC5.77□□□□□ -1.49
Use1Q9CQ56 Gm24036-201ENSMUST00000082868 156 ntBASIC5.77□□□□□ -1.49
Use1Q9CQ56 Gm24695-201ENSMUST00000083877 83 ntBASIC5.77□□□□□ -1.49
Use1Q9CQ56 Mup18-201ENSMUST00000098040 930 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Use1Q9CQ56 Mup11-202ENSMUST00000098046 930 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Use1Q9CQ56 Mup10-201ENSMUST00000098047 927 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
Use1Q9CQ56 Olfr597-201ENSMUST00000098203 948 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Use1Q9CQ56 Tex11-201ENSMUST00000009814 3250 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
Use1Q9CQ56 Gm15328-201ENSMUST00000144006 2977 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Use1Q9CQ56 Vmn2r120-201ENSMUST00000165781 2571 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Use1Q9CQ56 AU023762-203ENSMUST00000209897 2179 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Use1Q9CQ56 Gm38085-201ENSMUST00000195785 3062 ntBASIC5.77□□□□□ -1.49
Use1Q9CQ56 Zfp113-201ENSMUST00000049393 6470 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Use1Q9CQ56 Gm42798-201ENSMUST00000200853 3972 ntBASIC5.77□□□□□ -1.49
Use1Q9CQ56 Gm45554-203ENSMUST00000211410 2137 ntTSL 5 BASIC5.77□□□□□ -1.49
Use1Q9CQ56 Gm44113-201ENSMUST00000203510 3041 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Use1Q9CQ56 Olfr432-202ENSMUST00000213211 4435 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Use1Q9CQ56 Gm29438-201ENSMUST00000191298 2613 ntBASIC5.77□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 97.3 ms