Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Gm5600-202ENSMUST00000211589 2331 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Trim11Q99PQ2 AC116476.1-201ENSMUST00000226274 2318 ntBASIC7.87□□□□□ -1.15
Trim11Q99PQ2 Atp13a4-202ENSMUST00000057018 4054 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
Trim11Q99PQ2 Olfr1312-204ENSMUST00000215531 2975 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
Trim11Q99PQ2 F830045P16Rik-201ENSMUST00000050309 1925 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Trim11Q99PQ2 Fam196b-201ENSMUST00000093192 5031 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Trim11Q99PQ2 Mlh3-203ENSMUST00000220854 4699 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
Trim11Q99PQ2 4930533N22Rik-202ENSMUST00000206684 1503 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Trim11Q99PQ2 Dcaf1-203ENSMUST00000161758 5539 ntTSL 5 BASIC7.87□□□□□ -1.15
Trim11Q99PQ2 AC158115.1-201ENSMUST00000222830 3182 ntBASIC7.87□□□□□ -1.15
Trim11Q99PQ2 Tnik-211ENSMUST00000161964 3807 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
Trim11Q99PQ2 Dnah5-201ENSMUST00000067048 15637 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
Trim11Q99PQ2 Amd2-201ENSMUST00000080898 3218 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
Trim11Q99PQ2 B830042I05Rik-201ENSMUST00000208333 1620 ntTSL 5 BASIC7.86□□□□□ -1.15
Trim11Q99PQ2 Slc17a3-201ENSMUST00000039721 4276 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.15
Trim11Q99PQ2 D030034A15Rik-201ENSMUST00000215835 3953 ntBASIC7.86□□□□□ -1.15
Trim11Q99PQ2 AC124746.1-201ENSMUST00000227535 1300 ntBASIC7.86□□□□□ -1.15
Trim11Q99PQ2 Gip-202ENSMUST00000103157 652 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Trim11Q99PQ2 Gm23437-201ENSMUST00000104036 127 ntBASIC7.86□□□□□ -1.15
Trim11Q99PQ2 Gm3055-201ENSMUST00000105316 720 ntTSL 5 BASIC7.86□□□□□ -1.15
Trim11Q99PQ2 Gm14931-201ENSMUST00000111079 253 ntBASIC7.86□□□□□ -1.15
Trim11Q99PQ2 Gm8644-201ENSMUST00000118619 596 ntBASIC7.86□□□□□ -1.15
Trim11Q99PQ2 Gm6654-201ENSMUST00000118950 348 ntBASIC7.86□□□□□ -1.15
Trim11Q99PQ2 Gm4910-201ENSMUST00000119605 366 ntBASIC7.86□□□□□ -1.15
Trim11Q99PQ2 Gm11866-201ENSMUST00000120209 335 ntBASIC7.86□□□□□ -1.15
Trim11Q99PQ2 Gm13440-201ENSMUST00000121665 496 ntBASIC7.86□□□□□ -1.15
Trim11Q99PQ2 BC064078-201ENSMUST00000122939 570 ntBASIC7.86□□□□□ -1.15
Trim11Q99PQ2 Gm15848-202ENSMUST00000125056 832 ntTSL 3 BASIC7.86□□□□□ -1.15
Trim11Q99PQ2 6430710C18Rik-202ENSMUST00000125746 509 ntTSL 5 BASIC7.86□□□□□ -1.15
Trim11Q99PQ2 Gm11681-201ENSMUST00000127337 870 ntTSL 2 BASIC7.86□□□□□ -1.15
Trim11Q99PQ2 Gm24854-201ENSMUST00000158025 98 ntBASIC7.86□□□□□ -1.15
Trim11Q99PQ2 Gm23222-201ENSMUST00000158117 76 ntBASIC7.86□□□□□ -1.15
Trim11Q99PQ2 Obox3-204ENSMUST00000173912 1244 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
Trim11Q99PQ2 Vmn1r-ps86-201ENSMUST00000174052 547 ntBASIC7.86□□□□□ -1.15
Trim11Q99PQ2 Gm6061-201ENSMUST00000175860 492 ntBASIC7.86□□□□□ -1.15
Trim11Q99PQ2 1700006E09Rik-203ENSMUST00000176722 608 ntTSL 3 BASIC7.86□□□□□ -1.15
Trim11Q99PQ2 Rpl31-ps23-201ENSMUST00000180440 388 ntBASIC7.86□□□□□ -1.15
Trim11Q99PQ2 Gm28006-201ENSMUST00000183841 122 ntBASIC7.86□□□□□ -1.15
Trim11Q99PQ2 Gm37256-201ENSMUST00000193034 566 ntTSL 5 BASIC7.86□□□□□ -1.15
Trim11Q99PQ2 Gm6077-201ENSMUST00000196008 499 ntBASIC7.86□□□□□ -1.15
Trim11Q99PQ2 Gm42983-201ENSMUST00000199879 815 ntBASIC7.86□□□□□ -1.15
Trim11Q99PQ2 Gm18593-201ENSMUST00000200754 1139 ntBASIC7.86□□□□□ -1.15
Trim11Q99PQ2 Ccl24-202ENSMUST00000201401 561 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Trim11Q99PQ2 Olfr1401-ps1-201ENSMUST00000202296 211 ntBASIC7.86□□□□□ -1.15
Trim11Q99PQ2 Gm42963-201ENSMUST00000202943 1217 ntBASIC7.86□□□□□ -1.15
Trim11Q99PQ2 Gm4605-201ENSMUST00000203148 625 ntBASIC7.86□□□□□ -1.15
Trim11Q99PQ2 Clec2f-202ENSMUST00000204981 657 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Trim11Q99PQ2 Gm34549-202ENSMUST00000207356 970 ntTSL 5 BASIC7.86□□□□□ -1.15
Trim11Q99PQ2 Gm45100-201ENSMUST00000209153 391 ntBASIC7.86□□□□□ -1.15
Trim11Q99PQ2 Olfr529-ps1-201ENSMUST00000211097 928 ntBASIC7.86□□□□□ -1.15
Trim11Q99PQ2 Gm45864-201ENSMUST00000211965 1019 ntTSL 2 BASIC7.86□□□□□ -1.15
Trim11Q99PQ2 AC101709.1-201ENSMUST00000220276 909 ntTSL 5 BASIC7.86□□□□□ -1.15
Trim11Q99PQ2 AC140288.1-201ENSMUST00000226329 503 ntBASIC7.86□□□□□ -1.15
Trim11Q99PQ2 AC154380.1-201ENSMUST00000226804 720 ntBASIC7.86□□□□□ -1.15
Trim11Q99PQ2 Gnrhr-201ENSMUST00000031172 1211 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Trim11Q99PQ2 Olfr1151-201ENSMUST00000061081 927 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
Trim11Q99PQ2 Zfp781-201ENSMUST00000076281 732 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
Trim11Q99PQ2 Olfr192-201ENSMUST00000080251 925 ntBASIC7.86□□□□□ -1.15
Trim11Q99PQ2 Olfr661-201ENSMUST00000098168 964 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
Trim11Q99PQ2 AC139941.2-201ENSMUST00000221565 1824 ntBASIC7.86□□□□□ -1.15
Trim11Q99PQ2 Pik3ca-202ENSMUST00000108242 6171 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Trim11Q99PQ2 Gm19272-202ENSMUST00000185181 2217 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Trim11Q99PQ2 Lifr-207ENSMUST00000227727 2489 ntAPPRIS ALT2 BASIC7.86□□□□□ -1.15
Trim11Q99PQ2 Ank3-240ENSMUST00000183169 6870 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
Trim11Q99PQ2 Olfr311-203ENSMUST00000216473 2961 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
Trim11Q99PQ2 Usp17lc-201ENSMUST00000079348 1697 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Trim11Q99PQ2 Gm9573-201ENSMUST00000164502 5231 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
Trim11Q99PQ2 Prkd3-208ENSMUST00000168887 5884 ntAPPRIS P3 TSL 5 BASIC7.85□□□□□ -1.15
Trim11Q99PQ2 Gm37090-201ENSMUST00000195694 4105 ntBASIC7.85□□□□□ -1.15
Trim11Q99PQ2 Tshr-204ENSMUST00000221216 1638 ntTSL 5 BASIC7.85□□□□□ -1.15
Trim11Q99PQ2 Gm18248-201ENSMUST00000191164 1846 ntBASIC7.85□□□□□ -1.15
Trim11Q99PQ2 Gm4073-201ENSMUST00000176792 3500 ntBASIC7.85□□□□□ -1.15
Trim11Q99PQ2 Lncenc1-202ENSMUST00000179324 2764 ntTSL 2 BASIC7.85□□□□□ -1.15
Trim11Q99PQ2 Nyap2-203ENSMUST00000123285 7501 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Trim11Q99PQ2 Mpdz-202ENSMUST00000107258 7241 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
Trim11Q99PQ2 AC156636.1-201ENSMUST00000218639 2229 ntBASIC7.85□□□□□ -1.15
Trim11Q99PQ2 Gm25313-201ENSMUST00000101817 116 ntBASIC7.85□□□□□ -1.15
Trim11Q99PQ2 Vgll1-202ENSMUST00000114745 1218 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Trim11Q99PQ2 Ap3s1-ps1-201ENSMUST00000117113 579 ntBASIC7.85□□□□□ -1.15
Trim11Q99PQ2 Olfr1063-ps1-201ENSMUST00000118807 942 ntBASIC7.85□□□□□ -1.15
Trim11Q99PQ2 Gm13751-201ENSMUST00000120280 752 ntBASIC7.85□□□□□ -1.15
Trim11Q99PQ2 Gm12103-201ENSMUST00000121892 362 ntBASIC7.85□□□□□ -1.15
Trim11Q99PQ2 Gm16189-201ENSMUST00000123707 997 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Trim11Q99PQ2 Gm13147-201ENSMUST00000125785 585 ntTSL 2 BASIC7.85□□□□□ -1.15
Trim11Q99PQ2 Gm11364-201ENSMUST00000137593 297 ntTSL 5 BASIC7.85□□□□□ -1.15
Trim11Q99PQ2 Gm12145-201ENSMUST00000142108 217 ntTSL 3 BASIC7.85□□□□□ -1.15
Trim11Q99PQ2 Gm22035-201ENSMUST00000157284 228 ntBASIC7.85□□□□□ -1.15
Trim11Q99PQ2 2810442N19Rik-202ENSMUST00000161583 919 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Trim11Q99PQ2 Gm17198-201ENSMUST00000171792 1154 ntBASIC7.85□□□□□ -1.15
Trim11Q99PQ2 Gm18128-201ENSMUST00000172625 511 ntBASIC7.85□□□□□ -1.15
Trim11Q99PQ2 Gm18354-201ENSMUST00000173515 1068 ntBASIC7.85□□□□□ -1.15
Trim11Q99PQ2 Gm23287-201ENSMUST00000179427 116 ntBASIC7.85□□□□□ -1.15
Trim11Q99PQ2 Gm23143-201ENSMUST00000180137 116 ntBASIC7.85□□□□□ -1.15
Trim11Q99PQ2 Gm27866-201ENSMUST00000184459 171 ntBASIC7.85□□□□□ -1.15
Trim11Q99PQ2 Gm28528-201ENSMUST00000188560 857 ntTSL 5 BASIC7.85□□□□□ -1.15
Trim11Q99PQ2 Gm18775-201ENSMUST00000190763 586 ntBASIC7.85□□□□□ -1.15
Trim11Q99PQ2 Gm8539-201ENSMUST00000199822 501 ntBASIC7.85□□□□□ -1.15
Trim11Q99PQ2 2900060B14Rik-201ENSMUST00000203191 616 ntBASIC7.85□□□□□ -1.15
Trim11Q99PQ2 Gm4374-201ENSMUST00000204929 424 ntBASIC7.85□□□□□ -1.15
Trim11Q99PQ2 Gm44613-201ENSMUST00000205637 877 ntTSL 5 BASIC7.85□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 122.8 ms