Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Gm12222-201ENSMUST00000121368 260 ntBASIC6.16□□□□□ -1.42
Msh4Q99MT2 Gm15502-201ENSMUST00000121449 208 ntBASIC6.16□□□□□ -1.42
Msh4Q99MT2 Vmn1r208-201ENSMUST00000124841 927 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Msh4Q99MT2 Gm13480-201ENSMUST00000125095 1000 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Msh4Q99MT2 Selenok-ps1-201ENSMUST00000125204 785 ntBASIC6.16□□□□□ -1.42
Msh4Q99MT2 Grip1os1-202ENSMUST00000135940 1192 ntTSL 5 BASIC6.16□□□□□ -1.42
Msh4Q99MT2 Gm13211-201ENSMUST00000141649 697 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Msh4Q99MT2 Gm15527-202ENSMUST00000144094 770 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Msh4Q99MT2 Gm12867-201ENSMUST00000151216 457 ntTSL 3 BASIC6.16□□□□□ -1.42
Msh4Q99MT2 2810403D21Rik-207ENSMUST00000152089 852 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Msh4Q99MT2 Gm25962-201ENSMUST00000157173 168 ntBASIC6.16□□□□□ -1.42
Msh4Q99MT2 Gm25057-201ENSMUST00000157366 88 ntBASIC6.16□□□□□ -1.42
Msh4Q99MT2 Dynlt1a-201ENSMUST00000169415 742 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Msh4Q99MT2 Gm44370-201ENSMUST00000175436 112 ntBASIC6.16□□□□□ -1.42
Msh4Q99MT2 Gm29663-201ENSMUST00000186962 853 ntBASIC6.16□□□□□ -1.42
Msh4Q99MT2 Gm28286-201ENSMUST00000188704 586 ntTSL 2 BASIC6.16□□□□□ -1.42
Msh4Q99MT2 Gm10925-201ENSMUST00000189941 678 ntBASIC6.16□□□□□ -1.42
Msh4Q99MT2 Gm37991-201ENSMUST00000194297 696 ntBASIC6.16□□□□□ -1.42
Msh4Q99MT2 Gm8454-201ENSMUST00000196980 811 ntBASIC6.16□□□□□ -1.42
Msh4Q99MT2 Gm43157-201ENSMUST00000198223 412 ntBASIC6.16□□□□□ -1.42
Msh4Q99MT2 Gm43436-201ENSMUST00000199308 147 ntBASIC6.16□□□□□ -1.42
Msh4Q99MT2 4930417O13Rik-204ENSMUST00000205000 999 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Msh4Q99MT2 Lair1-209ENSMUST00000205296 412 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Msh4Q99MT2 Gm20074-201ENSMUST00000208144 484 ntBASIC6.16□□□□□ -1.42
Msh4Q99MT2 Gm45334-201ENSMUST00000211118 1227 ntTSL 5 BASIC6.16□□□□□ -1.42
Msh4Q99MT2 Olfr574-202ENSMUST00000211329 1039 ntAPPRIS ALT2 BASIC6.16□□□□□ -1.42
Msh4Q99MT2 Olfr643-202ENSMUST00000217217 945 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Msh4Q99MT2 4930455C13Rik-201ENSMUST00000218108 1018 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Msh4Q99MT2 AC155941.3-201ENSMUST00000218476 308 ntBASIC6.16□□□□□ -1.42
Msh4Q99MT2 4933412O06Rik-201ENSMUST00000222681 1123 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Msh4Q99MT2 Klrb1a-201ENSMUST00000032512 1274 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
Msh4Q99MT2 Olfr11-201ENSMUST00000043081 942 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Msh4Q99MT2 Prl3d3-201ENSMUST00000073601 856 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Msh4Q99MT2 Olfr1503-ps1-201ENSMUST00000076614 803 ntBASIC6.16□□□□□ -1.42
Msh4Q99MT2 Krtap6-1-201ENSMUST00000076906 594 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Msh4Q99MT2 Klra2-202ENSMUST00000088867 1132 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Msh4Q99MT2 Olfr810-201ENSMUST00000091986 1006 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Msh4Q99MT2 Gm18508-201ENSMUST00000215790 1642 ntBASIC6.16□□□□□ -1.42
Msh4Q99MT2 Scaper-204ENSMUST00000216595 2911 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Msh4Q99MT2 Nmd3-201ENSMUST00000029358 9135 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Msh4Q99MT2 Gm10773-201ENSMUST00000218071 3935 ntBASIC6.16□□□□□ -1.42
Msh4Q99MT2 Gm5373-202ENSMUST00000212931 2964 ntTSL 2 BASIC6.16□□□□□ -1.42
Msh4Q99MT2 Gm45172-201ENSMUST00000206054 1301 ntBASIC6.16□□□□□ -1.42
Msh4Q99MT2 2610044O15Rik8-202ENSMUST00000186619 2337 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
Msh4Q99MT2 Gm13102-201ENSMUST00000097799 2338 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
Msh4Q99MT2 Gm13854-201ENSMUST00000121183 1679 ntBASIC6.16□□□□□ -1.42
Msh4Q99MT2 Tank-205ENSMUST00000112502 2016 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Msh4Q99MT2 Tank-201ENSMUST00000078074 2018 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
Msh4Q99MT2 Robo2-203ENSMUST00000117785 8124 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Msh4Q99MT2 Il21-201ENSMUST00000029273 3072 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
Msh4Q99MT2 Gm15169-201ENSMUST00000126095 2753 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Msh4Q99MT2 Gm44220-201ENSMUST00000203784 2487 ntBASIC6.16□□□□□ -1.42
Msh4Q99MT2 Sgip1-205ENSMUST00000106882 6061 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Msh4Q99MT2 Ect2l-201ENSMUST00000095817 2900 ntAPPRIS P2 TSL 5 BASIC6.15□□□□□ -1.42
Msh4Q99MT2 Ncr1-202ENSMUST00000126417 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Msh4Q99MT2 Osbpl9-213ENSMUST00000160271 2604 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Msh4Q99MT2 Gdpd4-202ENSMUST00000170049 1899 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Msh4Q99MT2 Nxpe2-201ENSMUST00000034527 3366 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Msh4Q99MT2 AC165080.4-201ENSMUST00000213591 9507 ntTSL 5 BASIC6.15□□□□□ -1.42
Msh4Q99MT2 Gm42544-201ENSMUST00000197868 3242 ntBASIC6.15□□□□□ -1.42
Msh4Q99MT2 Vmn2r-ps119-201ENSMUST00000177481 2406 ntBASIC6.15□□□□□ -1.42
Msh4Q99MT2 Hrnr-201ENSMUST00000090856 10656 ntAPPRIS P2 TSL 5 BASIC6.15□□□□□ -1.42
Msh4Q99MT2 Bivm-201ENSMUST00000035991 3313 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Msh4Q99MT2 Kat7-201ENSMUST00000072621 3324 ntTSL 5 BASIC6.15□□□□□ -1.42
Msh4Q99MT2 Igkv4-57-1-201ENSMUST00000103356 373 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Msh4Q99MT2 Rpl5-ps2-201ENSMUST00000119057 891 ntBASIC6.15□□□□□ -1.42
Msh4Q99MT2 Gm14776-201ENSMUST00000121029 887 ntBASIC6.15□□□□□ -1.42
Msh4Q99MT2 Mup-ps15-201ENSMUST00000121741 539 ntBASIC6.15□□□□□ -1.42
Msh4Q99MT2 Etfbkmt-207ENSMUST00000147934 1092 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Msh4Q99MT2 Gm22428-201ENSMUST00000158554 132 ntBASIC6.15□□□□□ -1.42
Msh4Q99MT2 Gm17140-201ENSMUST00000169163 627 ntTSL 3 BASIC6.15□□□□□ -1.42
Msh4Q99MT2 Gm4152-201ENSMUST00000172675 259 ntBASIC6.15□□□□□ -1.42
Msh4Q99MT2 Gm20549-201ENSMUST00000174804 429 ntBASIC6.15□□□□□ -1.42
Msh4Q99MT2 Vmn1r-ps143-201ENSMUST00000176730 604 ntBASIC6.15□□□□□ -1.42
Msh4Q99MT2 Gm5225-201ENSMUST00000178572 324 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Msh4Q99MT2 n-R5s109-201ENSMUST00000179195 119 ntBASIC6.15□□□□□ -1.42
Msh4Q99MT2 Gm26692-201ENSMUST00000180428 688 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Msh4Q99MT2 Rpl9-ps1-202ENSMUST00000182502 576 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Msh4Q99MT2 4933404I11Rik-201ENSMUST00000190294 1202 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Msh4Q99MT2 Gm29072-201ENSMUST00000191149 678 ntBASIC6.15□□□□□ -1.42
Msh4Q99MT2 Gm20926-201ENSMUST00000194457 696 ntBASIC6.15□□□□□ -1.42
Msh4Q99MT2 Gm38216-201ENSMUST00000194872 1214 ntBASIC6.15□□□□□ -1.42
Msh4Q99MT2 Gm43531-201ENSMUST00000200676 1114 ntBASIC6.15□□□□□ -1.42
Msh4Q99MT2 Gm42799-201ENSMUST00000201331 328 ntBASIC6.15□□□□□ -1.42
Msh4Q99MT2 Gm7554-201ENSMUST00000202282 574 ntBASIC6.15□□□□□ -1.42
Msh4Q99MT2 Gm44163-201ENSMUST00000205140 475 ntBASIC6.15□□□□□ -1.42
Msh4Q99MT2 Gm44538-201ENSMUST00000205615 348 ntBASIC6.15□□□□□ -1.42
Msh4Q99MT2 Hddc3-209ENSMUST00000206480 454 ntTSL 2 BASIC6.15□□□□□ -1.42
Msh4Q99MT2 Gm10297-201ENSMUST00000207136 651 ntBASIC6.15□□□□□ -1.42
Msh4Q99MT2 Gm18600-201ENSMUST00000207205 505 ntBASIC6.15□□□□□ -1.42
Msh4Q99MT2 Mbd3l2-202ENSMUST00000213777 2116 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Msh4Q99MT2 Gm46364-201ENSMUST00000218548 319 ntBASIC6.15□□□□□ -1.42
Msh4Q99MT2 AC124537.2-201ENSMUST00000220872 883 ntTSL 5 BASIC6.15□□□□□ -1.42
Msh4Q99MT2 Gm2099-201ENSMUST00000220979 412 ntBASIC6.15□□□□□ -1.42
Msh4Q99MT2 AC159293.2-201ENSMUST00000222289 424 ntBASIC6.15□□□□□ -1.42
Msh4Q99MT2 AC154861.1-201ENSMUST00000223767 800 ntBASIC6.15□□□□□ -1.42
Msh4Q99MT2 AC116596.2-203ENSMUST00000227345 731 ntBASIC6.15□□□□□ -1.42
Msh4Q99MT2 AC116591.1-201ENSMUST00000227919 351 ntBASIC6.15□□□□□ -1.42
Msh4Q99MT2 AC116319.2-201ENSMUST00000228159 984 ntBASIC6.15□□□□□ -1.42
Msh4Q99MT2 AC136376.1-201ENSMUST00000228496 950 ntBASIC6.15□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms