Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Ccr2-203ENSMUST00000168841 5728 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Usp47Q8BY87 Apbb2-210ENSMUST00000160870 6526 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Usp47Q8BY87 Gm38322-201ENSMUST00000194074 2300 ntBASIC8.57□□□□□ -1.04
Usp47Q8BY87 Rab3b-202ENSMUST00000106650 3327 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Usp47Q8BY87 Dzank1-204ENSMUST00000163701 6834 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
Usp47Q8BY87 Gm28432-201ENSMUST00000185237 1499 ntTSL 5 BASIC8.57□□□□□ -1.04
Usp47Q8BY87 Gm28081-201ENSMUST00000185321 1497 ntTSL 5 BASIC8.57□□□□□ -1.04
Usp47Q8BY87 Gm29473-201ENSMUST00000185588 1497 ntTSL 5 BASIC8.57□□□□□ -1.04
Usp47Q8BY87 Gm29662-201ENSMUST00000185620 1499 ntTSL 5 BASIC8.57□□□□□ -1.04
Usp47Q8BY87 Gm28082-201ENSMUST00000185683 1499 ntTSL 5 BASIC8.57□□□□□ -1.04
Usp47Q8BY87 Gm29061-201ENSMUST00000185900 1499 ntTSL 5 BASIC8.57□□□□□ -1.04
Usp47Q8BY87 Gm28679-201ENSMUST00000186013 1499 ntTSL 5 BASIC8.57□□□□□ -1.04
Usp47Q8BY87 Gm29565-202ENSMUST00000186260 1499 ntTSL 5 BASIC8.57□□□□□ -1.04
Usp47Q8BY87 Gm28338-202ENSMUST00000186269 1499 ntTSL 5 BASIC8.57□□□□□ -1.04
Usp47Q8BY87 Gm28668-202ENSMUST00000186549 1499 ntTSL 5 BASIC8.57□□□□□ -1.04
Usp47Q8BY87 Gm29321-201ENSMUST00000186727 1499 ntTSL 5 BASIC8.57□□□□□ -1.04
Usp47Q8BY87 Gm28135-201ENSMUST00000186847 1499 ntTSL 5 BASIC8.57□□□□□ -1.04
Usp47Q8BY87 Gm29158-201ENSMUST00000186883 1494 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Usp47Q8BY87 Gm28291-202ENSMUST00000186921 1499 ntTSL 5 BASIC8.57□□□□□ -1.04
Usp47Q8BY87 Gm29393-201ENSMUST00000187002 1499 ntTSL 5 BASIC8.57□□□□□ -1.04
Usp47Q8BY87 Gm29219-201ENSMUST00000187224 1499 ntTSL 5 BASIC8.57□□□□□ -1.04
Usp47Q8BY87 Gm29547-201ENSMUST00000187258 1499 ntTSL 5 BASIC8.57□□□□□ -1.04
Usp47Q8BY87 Gm28260-201ENSMUST00000187337 1499 ntTSL 5 BASIC8.57□□□□□ -1.04
Usp47Q8BY87 Gm28225-201ENSMUST00000187730 1499 ntTSL 5 BASIC8.57□□□□□ -1.04
Usp47Q8BY87 Gm29569-202ENSMUST00000187955 1499 ntTSL 5 BASIC8.57□□□□□ -1.04
Usp47Q8BY87 Gm29625-201ENSMUST00000188079 1499 ntTSL 5 BASIC8.57□□□□□ -1.04
Usp47Q8BY87 Gm28735-202ENSMUST00000188159 1499 ntTSL 5 BASIC8.57□□□□□ -1.04
Usp47Q8BY87 Gm29297-202ENSMUST00000188186 1499 ntTSL 5 BASIC8.57□□□□□ -1.04
Usp47Q8BY87 Gm29457-201ENSMUST00000188224 1499 ntTSL 5 BASIC8.57□□□□□ -1.04
Usp47Q8BY87 Gm29190-201ENSMUST00000188255 1499 ntTSL 5 BASIC8.57□□□□□ -1.04
Usp47Q8BY87 Gm28236-203ENSMUST00000188311 1499 ntTSL 5 BASIC8.57□□□□□ -1.04
Usp47Q8BY87 Gm28197-203ENSMUST00000188434 1499 ntTSL 5 BASIC8.57□□□□□ -1.04
Usp47Q8BY87 Gm29070-202ENSMUST00000188541 1499 ntTSL 5 BASIC8.57□□□□□ -1.04
Usp47Q8BY87 Gm28545-201ENSMUST00000188667 1499 ntTSL 5 BASIC8.57□□□□□ -1.04
Usp47Q8BY87 Gm29265-201ENSMUST00000188697 1499 ntTSL 5 BASIC8.57□□□□□ -1.04
Usp47Q8BY87 Gm28947-203ENSMUST00000188701 1499 ntTSL 5 BASIC8.57□□□□□ -1.04
Usp47Q8BY87 Gm29616-201ENSMUST00000188777 1499 ntTSL 5 BASIC8.57□□□□□ -1.04
Usp47Q8BY87 Gm29162-202ENSMUST00000188893 1499 ntTSL 5 BASIC8.57□□□□□ -1.04
Usp47Q8BY87 Gm28606-201ENSMUST00000188938 1499 ntTSL 5 BASIC8.57□□□□□ -1.04
Usp47Q8BY87 Gm29338-201ENSMUST00000189318 1499 ntTSL 5 BASIC8.57□□□□□ -1.04
Usp47Q8BY87 Gm29425-202ENSMUST00000189421 1499 ntTSL 5 BASIC8.57□□□□□ -1.04
Usp47Q8BY87 Gm29271-203ENSMUST00000189943 1499 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Usp47Q8BY87 Gm29381-201ENSMUST00000190168 1497 ntTSL 5 BASIC8.57□□□□□ -1.04
Usp47Q8BY87 Gm28454-203ENSMUST00000190183 1495 ntTSL 5 BASIC8.57□□□□□ -1.04
Usp47Q8BY87 Gm28842-202ENSMUST00000190289 1499 ntTSL 5 BASIC8.57□□□□□ -1.04
Usp47Q8BY87 Gm28259-201ENSMUST00000190319 1497 ntTSL 5 BASIC8.57□□□□□ -1.04
Usp47Q8BY87 Gm28318-203ENSMUST00000190347 1499 ntTSL 5 BASIC8.57□□□□□ -1.04
Usp47Q8BY87 Gm28633-202ENSMUST00000190867 1485 ntTSL 5 BASIC8.57□□□□□ -1.04
Usp47Q8BY87 Gm29182-202ENSMUST00000191008 1499 ntTSL 5 BASIC8.57□□□□□ -1.04
Usp47Q8BY87 Gm28632-202ENSMUST00000191193 1499 ntTSL 5 BASIC8.57□□□□□ -1.04
Usp47Q8BY87 Gm28245-203ENSMUST00000191551 1495 ntTSL 5 BASIC8.57□□□□□ -1.04
Usp47Q8BY87 Gm38370-201ENSMUST00000192545 1499 ntTSL 5 BASIC8.57□□□□□ -1.04
Usp47Q8BY87 Gm37462-201ENSMUST00000193386 1498 ntTSL 5 BASIC8.57□□□□□ -1.04
Usp47Q8BY87 Gm32114-203ENSMUST00000195759 1499 ntTSL 5 BASIC8.57□□□□□ -1.04
Usp47Q8BY87 1110059G10Rik-201ENSMUST00000035154 3361 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Usp47Q8BY87 Erc2-208ENSMUST00000210924 4871 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Usp47Q8BY87 Igkv4-71-201ENSMUST00000101325 288 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Usp47Q8BY87 Gm25345-201ENSMUST00000104505 133 ntBASIC8.57□□□□□ -1.04
Usp47Q8BY87 Mup19-202ENSMUST00000107477 720 ntAPPRIS ALT2 TSL 2 BASIC8.57□□□□□ -1.04
Usp47Q8BY87 Gm8501-201ENSMUST00000117684 432 ntBASIC8.57□□□□□ -1.04
Usp47Q8BY87 Gm15048-201ENSMUST00000118201 954 ntBASIC8.57□□□□□ -1.04
Usp47Q8BY87 Tmem216-203ENSMUST00000123788 935 ntAPPRIS P1 TSL 3 BASIC8.57□□□□□ -1.04
Usp47Q8BY87 Gm16086-201ENSMUST00000143652 371 ntTSL 3 BASIC8.57□□□□□ -1.04
Usp47Q8BY87 1700095A21Rik-201ENSMUST00000145269 1069 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Usp47Q8BY87 Gm22724-201ENSMUST00000158091 127 ntBASIC8.57□□□□□ -1.04
Usp47Q8BY87 Gm24735-201ENSMUST00000158859 118 ntBASIC8.57□□□□□ -1.04
Usp47Q8BY87 Cabcoco1-202ENSMUST00000166919 1016 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
Usp47Q8BY87 Gm20480-201ENSMUST00000173953 250 ntBASIC8.57□□□□□ -1.04
Usp47Q8BY87 Eloc-206ENSMUST00000186948 641 ntAPPRIS P1 TSL 2 BASIC8.57□□□□□ -1.04
Usp47Q8BY87 4930562F17Rik-201ENSMUST00000195279 960 ntTSL 3 BASIC8.57□□□□□ -1.04
Usp47Q8BY87 Gm44494-201ENSMUST00000196760 129 ntBASIC8.57□□□□□ -1.04
Usp47Q8BY87 Gm43157-201ENSMUST00000198223 412 ntBASIC8.57□□□□□ -1.04
Usp47Q8BY87 4930519H02Rik-202ENSMUST00000198907 968 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Usp47Q8BY87 Asb17os-202ENSMUST00000200329 497 ntTSL 3 BASIC8.57□□□□□ -1.04
Usp47Q8BY87 Gm19060-201ENSMUST00000201959 421 ntBASIC8.57□□□□□ -1.04
Usp47Q8BY87 Gm4548-201ENSMUST00000208487 509 ntBASIC8.57□□□□□ -1.04
Usp47Q8BY87 Gm44992-214ENSMUST00000210787 1079 ntTSL 5 BASIC8.57□□□□□ -1.04
Usp47Q8BY87 Gm4510-201ENSMUST00000218265 427 ntBASIC8.57□□□□□ -1.04
Usp47Q8BY87 Olfr1404-201ENSMUST00000056592 1034 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Usp47Q8BY87 Zfp850-201ENSMUST00000099111 941 ntBASIC8.57□□□□□ -1.04
Usp47Q8BY87 Xpo1-204ENSMUST00000109551 4906 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Usp47Q8BY87 Cfap70-201ENSMUST00000022348 3469 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Usp47Q8BY87 Rfx4-203ENSMUST00000095388 3274 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Usp47Q8BY87 Med12l-204ENSMUST00000164225 10264 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
Usp47Q8BY87 Aass-201ENSMUST00000031707 3701 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Usp47Q8BY87 Smarca2-203ENSMUST00000112637 1962 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Usp47Q8BY87 Prkg2-205ENSMUST00000162619 1308 ntTSL 5 BASIC8.57□□□□□ -1.04
Usp47Q8BY87 Vmn1r188-203ENSMUST00000228243 8473 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Usp47Q8BY87 Cdk5rap2-206ENSMUST00000144099 11847 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Usp47Q8BY87 Tbpl2-201ENSMUST00000080453 1379 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Usp47Q8BY87 D030045P18Rik-201ENSMUST00000213245 1892 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Usp47Q8BY87 Prom1-208ENSMUST00000179059 3579 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
Usp47Q8BY87 Gm2974-201ENSMUST00000164512 1990 ntAPPRIS P5 TSL 5 BASIC8.56□□□□□ -1.04
Usp47Q8BY87 Zzz3-210ENSMUST00000200570 2491 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
Usp47Q8BY87 Ankrd55-205ENSMUST00000223871 3209 ntBASIC8.56□□□□□ -1.04
Usp47Q8BY87 Pik3r3-201ENSMUST00000030464 5257 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Usp47Q8BY87 Elmo1-202ENSMUST00000180626 2020 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Usp47Q8BY87 Gm8750-201ENSMUST00000173278 1537 ntBASIC8.56□□□□□ -1.04
Usp47Q8BY87 Gm13770-201ENSMUST00000117149 305 ntBASIC8.56□□□□□ -1.04
Usp47Q8BY87 Gm15801-201ENSMUST00000120920 522 ntBASIC8.56□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms