Protein–RNA interactions for Protein: Q3US17

Znf48, Zinc finger protein 48, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf48Q3US17 Pcdh9-201ENSMUST00000068992 3714 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
Znf48Q3US17 9530036M11Rik-201ENSMUST00000138767 1996 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Znf48Q3US17 Pramef6-201ENSMUST00000081645 1487 ntAPPRIS P2 TSL 5 BASIC6.58□□□□□ -1.36
Znf48Q3US17 Zc3h12c-201ENSMUST00000165519 6133 ntAPPRIS P2 TSL 5 BASIC6.58□□□□□ -1.36
Znf48Q3US17 Pcdh17-201ENSMUST00000071370 11451 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Znf48Q3US17 Gm10610-202ENSMUST00000207184 2693 ntTSL 5 BASIC6.58□□□□□ -1.36
Znf48Q3US17 Fgf10-201ENSMUST00000022246 4114 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Znf48Q3US17 Gm4524-201ENSMUST00000161614 2152 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Znf48Q3US17 Alkbh8-201ENSMUST00000053407 3603 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Znf48Q3US17 Slc5a9-202ENSMUST00000102720 3393 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Znf48Q3US17 Pfkfb2-204ENSMUST00000171479 3342 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Znf48Q3US17 Dubr-205ENSMUST00000191079 2105 ntTSL 2 BASIC6.58□□□□□ -1.36
Znf48Q3US17 Olfr806-202ENSMUST00000213239 3724 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Znf48Q3US17 Gm37499-201ENSMUST00000194683 3478 ntBASIC6.57□□□□□ -1.36
Znf48Q3US17 Gm9105-201ENSMUST00000120160 1398 ntBASIC6.57□□□□□ -1.36
Znf48Q3US17 Amz2-201ENSMUST00000020929 1811 ntAPPRIS ALT2 TSL 2 BASIC6.57□□□□□ -1.36
Znf48Q3US17 Vmn1r184-205ENSMUST00000227790 4334 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Znf48Q3US17 Gm44141-201ENSMUST00000204231 1583 ntBASIC6.57□□□□□ -1.36
Znf48Q3US17 Mc2r-201ENSMUST00000052347 1562 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Znf48Q3US17 Kcnj15-203ENSMUST00000113855 5128 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Znf48Q3US17 Gsk3b-202ENSMUST00000114750 1750 ntAPPRIS ALT1 TSL 5 BASIC6.57□□□□□ -1.36
Znf48Q3US17 Gm38130-201ENSMUST00000194311 1761 ntBASIC6.57□□□□□ -1.36
Znf48Q3US17 Cdh26-201ENSMUST00000042092 2891 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
Znf48Q3US17 Nr1h5-202ENSMUST00000196135 1344 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Znf48Q3US17 Gm37457-201ENSMUST00000193639 2433 ntBASIC6.57□□□□□ -1.36
Znf48Q3US17 Cflar-205ENSMUST00000114313 6572 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Znf48Q3US17 Snapc4-201ENSMUST00000035427 4363 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Znf48Q3US17 Mkl2-204ENSMUST00000149359 8295 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
Znf48Q3US17 B130021K23Rik-201ENSMUST00000205226 2593 ntBASIC6.57□□□□□ -1.36
Znf48Q3US17 Ttc41-203ENSMUST00000217747 1949 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Znf48Q3US17 Gm25167-201ENSMUST00000104188 120 ntBASIC6.57□□□□□ -1.36
Znf48Q3US17 Prl-202ENSMUST00000110369 895 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Znf48Q3US17 Gm14711-201ENSMUST00000117056 217 ntBASIC6.57□□□□□ -1.36
Znf48Q3US17 Gm12344-201ENSMUST00000117087 329 ntBASIC6.57□□□□□ -1.36
Znf48Q3US17 Gm15209-201ENSMUST00000117703 400 ntBASIC6.57□□□□□ -1.36
Znf48Q3US17 Gm9439-201ENSMUST00000119554 973 ntBASIC6.57□□□□□ -1.36
Znf48Q3US17 Snrp1c-ps2-201ENSMUST00000120976 365 ntBASIC6.57□□□□□ -1.36
Znf48Q3US17 Gm14638-201ENSMUST00000121338 216 ntBASIC6.57□□□□□ -1.36
Znf48Q3US17 Gm13221-201ENSMUST00000121712 430 ntBASIC6.57□□□□□ -1.36
Znf48Q3US17 Gm14089-201ENSMUST00000130025 318 ntTSL 3 BASIC6.57□□□□□ -1.36
Znf48Q3US17 Gm16157-202ENSMUST00000135564 1082 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Znf48Q3US17 Gm11659-201ENSMUST00000137561 466 ntTSL 3 BASIC6.57□□□□□ -1.36
Znf48Q3US17 Gm10157-201ENSMUST00000139408 343 ntBASIC6.57□□□□□ -1.36
Znf48Q3US17 1700073E17Rik-203ENSMUST00000148424 741 ntBASIC6.57□□□□□ -1.36
Znf48Q3US17 Gm25970-201ENSMUST00000157165 86 ntBASIC6.57□□□□□ -1.36
Znf48Q3US17 Gm26959-201ENSMUST00000182376 978 ntBASIC6.57□□□□□ -1.36
Znf48Q3US17 Gm28006-201ENSMUST00000183841 122 ntBASIC6.57□□□□□ -1.36
Znf48Q3US17 2610034O05Rik-201ENSMUST00000194078 855 ntBASIC6.57□□□□□ -1.36
Znf48Q3US17 Rpl26-ps3-201ENSMUST00000195115 435 ntBASIC6.57□□□□□ -1.36
Znf48Q3US17 Gm17979-201ENSMUST00000196646 611 ntBASIC6.57□□□□□ -1.36
Znf48Q3US17 4930539C22Rik-201ENSMUST00000198231 970 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Znf48Q3US17 Igkv13-56-1-201ENSMUST00000198481 209 ntBASIC6.57□□□□□ -1.36
Znf48Q3US17 Gm45901-201ENSMUST00000203807 661 ntTSL 5 BASIC6.57□□□□□ -1.36
Znf48Q3US17 Gm44691-201ENSMUST00000207562 324 ntTSL 5 BASIC6.57□□□□□ -1.36
Znf48Q3US17 Gm9289-201ENSMUST00000221269 606 ntBASIC6.57□□□□□ -1.36
Znf48Q3US17 Mplkip-202ENSMUST00000221480 582 ntTSL 5 BASIC6.57□□□□□ -1.36
Znf48Q3US17 Gm33682-201ENSMUST00000222233 256 ntTSL 3 BASIC6.57□□□□□ -1.36
Znf48Q3US17 AC163038.3-201ENSMUST00000223945 558 ntBASIC6.57□□□□□ -1.36
Znf48Q3US17 Spats1-201ENSMUST00000024731 1160 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Znf48Q3US17 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Znf48Q3US17 Gm5316-201ENSMUST00000050391 270 ntBASIC6.57□□□□□ -1.36
Znf48Q3US17 Olfr807-201ENSMUST00000059038 997 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Znf48Q3US17 Olfr402-201ENSMUST00000073675 1012 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Znf48Q3US17 Olfr1360-201ENSMUST00000079135 980 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Znf48Q3US17 Gm24046-201ENSMUST00000083111 165 ntBASIC6.57□□□□□ -1.36
Znf48Q3US17 Olfr1259-201ENSMUST00000090695 930 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Znf48Q3US17 Gm10805-201ENSMUST00000099710 399 ntBASIC6.57□□□□□ -1.36
Znf48Q3US17 Gm38173-201ENSMUST00000193126 2314 ntBASIC6.57□□□□□ -1.36
Znf48Q3US17 Gm33111-202ENSMUST00000219954 3388 ntTSL 2 BASIC6.57□□□□□ -1.36
Znf48Q3US17 Anapc15-210ENSMUST00000144207 3103 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Znf48Q3US17 Gm37109-201ENSMUST00000195475 2254 ntBASIC6.57□□□□□ -1.36
Znf48Q3US17 C2cd3-201ENSMUST00000051777 7803 ntAPPRIS P2 TSL 5 BASIC6.57□□□□□ -1.36
Znf48Q3US17 Prepl-201ENSMUST00000072406 3294 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Znf48Q3US17 Unc79-201ENSMUST00000085079 7762 ntAPPRIS ALT2 TSL 2 BASIC6.57□□□□□ -1.36
Znf48Q3US17 Eml1-201ENSMUST00000054955 3879 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Znf48Q3US17 Cdc42bpa-204ENSMUST00000111117 9161 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Znf48Q3US17 Ms4a6d-201ENSMUST00000025582 1418 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Znf48Q3US17 Ptpn3-201ENSMUST00000075637 6369 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Znf48Q3US17 Gm6313-202ENSMUST00000150112 2562 ntTSL 2 BASIC6.57□□□□□ -1.36
Znf48Q3US17 Kpna2-ps-201ENSMUST00000120025 1569 ntBASIC6.57□□□□□ -1.36
Znf48Q3US17 Rttn-201ENSMUST00000023828 7268 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Znf48Q3US17 Mageb5-201ENSMUST00000082048 1357 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Znf48Q3US17 9030624J02Rik-201ENSMUST00000033280 2934 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Znf48Q3US17 Gm28892-201ENSMUST00000188123 2721 ntTSL 5 BASIC6.56□□□□□ -1.36
Znf48Q3US17 Slc3a1-201ENSMUST00000024944 2307 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Znf48Q3US17 Trim39-201ENSMUST00000042717 3085 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Znf48Q3US17 Wac-202ENSMUST00000092112 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Znf48Q3US17 Gm11639-201ENSMUST00000148007 3613 ntTSL 5 BASIC6.56□□□□□ -1.36
Znf48Q3US17 Gm21043-201ENSMUST00000199316 1517 ntBASIC6.56□□□□□ -1.36
Znf48Q3US17 Dph6-202ENSMUST00000055144 2476 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Znf48Q3US17 Mpdz-216ENSMUST00000220807 6295 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Znf48Q3US17 Olfr115-203ENSMUST00000223366 2273 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Znf48Q3US17 Calcr-201ENSMUST00000075644 3763 ntAPPRIS P4 TSL 1 (best) BASIC6.56□□□□□ -1.36
Znf48Q3US17 Lpcat2b-201ENSMUST00000166599 2782 ntAPPRIS P1 TSL 3 BASIC6.56□□□□□ -1.36
Znf48Q3US17 Galnt5-201ENSMUST00000112616 4225 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Znf48Q3US17 AI314278-202ENSMUST00000209026 2373 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Znf48Q3US17 Gm16409-201ENSMUST00000100510 747 ntBASIC6.56□□□□□ -1.36
Znf48Q3US17 Gm3940-201ENSMUST00000105087 432 ntBASIC6.56□□□□□ -1.36
Znf48Q3US17 Gm12838-201ENSMUST00000116278 325 ntBASIC6.56□□□□□ -1.36
Znf48Q3US17 Rpl35a-ps2-201ENSMUST00000117444 333 ntBASIC6.56□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 101.8 ms